RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 EPRSP07814 1512 aaKnown RBP15.81■□□□□ 0.12
PUM3-202ENST00000397885 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
PUM3-202ENST00000397885 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
PUM3-202ENST00000397885 TIMELESSQ9UNS1 1208 aa15.8■□□□□ 0.12
PUM3-202ENST00000397885 KANK4Q5T7N3 995 aaPredicted RBP15.79■□□□□ 0.12
PUM3-202ENST00000397885 IL27Q8NEV9 243 aa15.79■□□□□ 0.12
PUM3-202ENST00000397885 KDM6BO15054 1643 aa15.79■□□□□ 0.12
PUM3-202ENST00000397885 CCNB3Q8WWL7 1395 aa15.79■□□□□ 0.12
PUM3-202ENST00000397885 WDR7Q9Y4E6 1490 aa15.79■□□□□ 0.12
PUM3-202ENST00000397885 MAP3K4Q9Y6R4 1608 aa15.78■□□□□ 0.12
PUM3-202ENST00000397885 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
PUM3-202ENST00000397885 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.12
PUM3-202ENST00000397885 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.12
PUM3-202ENST00000397885 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.11
PUM3-202ENST00000397885 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
PUM3-202ENST00000397885 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
PUM3-202ENST00000397885 RAPGEF6Q8TEU7 1601 aa15.74■□□□□ 0.11
PUM3-202ENST00000397885 EFCAB5A4FU69 1503 aa15.74■□□□□ 0.11
PUM3-202ENST00000397885 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
PUM3-202ENST00000397885 MAP3K1Q13233 1512 aa15.73■□□□□ 0.11
PUM3-202ENST00000397885 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
PUM3-202ENST00000397885 ATP10BO94823 1461 aa15.72■□□□□ 0.11
PUM3-202ENST00000397885 CFAP43Q8NDM7 1665 aa15.72■□□□□ 0.11
PUM3-202ENST00000397885 WASHC2CQ9Y4E1 1318 aa15.71■□□□□ 0.11
PUM3-202ENST00000397885 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
PUM3-202ENST00000397885 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
PUM3-202ENST00000397885 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
PUM3-202ENST00000397885 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.69■□□□□ 0.1
PUM3-202ENST00000397885 TIAM1Q13009 1591 aa15.69■□□□□ 0.1
PUM3-202ENST00000397885 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
PUM3-202ENST00000397885 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
PUM3-202ENST00000397885 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
PUM3-202ENST00000397885 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
PUM3-202ENST00000397885 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
PUM3-202ENST00000397885 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
PUM3-202ENST00000397885 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
PUM3-202ENST00000397885 RAB3GAP2Q9H2M9 1393 aa15.64■□□□□ 0.09
PUM3-202ENST00000397885 PKNOX2Q96KN3 472 aa15.63■□□□□ 0.09
PUM3-202ENST00000397885 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
PUM3-202ENST00000397885 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
PUM3-202ENST00000397885 LRRC9Q6ZRR7 1453 aa15.61■□□□□ 0.09
PUM3-202ENST00000397885 COL17A1Q9UMD9 1497 aaPredicted RBP15.61■□□□□ 0.09
PUM3-202ENST00000397885 SETD5Q9C0A6 1442 aa15.6■□□□□ 0.09
PUM3-202ENST00000397885 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
PUM3-202ENST00000397885 FMN1Q68DA7 1419 aa15.59■□□□□ 0.09
PUM3-202ENST00000397885 B4GALNT3Q6L9W6 998 aa15.59■□□□□ 0.09
PUM3-202ENST00000397885 RSPH6AQ9H0K4 717 aa15.59■□□□□ 0.09
PUM3-202ENST00000397885 PHLDB1Q86UU1 1377 aa15.58■□□□□ 0.08
PUM3-202ENST00000397885 PPM1GO15355 546 aaPredicted RBP15.56■□□□□ 0.08
PUM3-202ENST00000397885 HECW1Q76N89 1606 aa15.55■□□□□ 0.08
PUM3-202ENST00000397885 ARAP3Q8WWN8 1544 aa15.55■□□□□ 0.08
PUM3-202ENST00000397885 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
PUM3-202ENST00000397885 GLIPR1L2Q4G1C9 344 aa15.52■□□□□ 0.08
PUM3-202ENST00000397885 NEO1Q92859 1461 aa15.52■□□□□ 0.08
PUM3-202ENST00000397885 ZBED9Q6R2W3 1325 aa15.51■□□□□ 0.07
PUM3-202ENST00000397885 NEFMP07197 916 aa15.51■□□□□ 0.07
PUM3-202ENST00000397885 ATP1B4Q9UN42 357 aaPredicted RBP15.51■□□□□ 0.07
PUM3-202ENST00000397885 KDM4FA0A1W2PPD8 638 aa15.5■□□□□ 0.07
PUM3-202ENST00000397885 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
PUM3-202ENST00000397885 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
PUM3-202ENST00000397885 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
PUM3-202ENST00000397885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
PUM3-202ENST00000397885 CFAP74Q9C0B2 1584 aa15.48■□□□□ 0.07
PUM3-202ENST00000397885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
PUM3-202ENST00000397885 GSE1Q14687 1217 aa15.46■□□□□ 0.07
PUM3-202ENST00000397885 SIN3AQ96ST3 1273 aa15.46■□□□□ 0.07
PUM3-202ENST00000397885 ADGRL1O94910 1474 aa15.45■□□□□ 0.06
PUM3-202ENST00000397885 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
PUM3-202ENST00000397885 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
PUM3-202ENST00000397885 CASKIN1Q8WXD9 1431 aa15.44■□□□□ 0.06
PUM3-202ENST00000397885 RNF123Q5XPI4 1314 aa15.44■□□□□ 0.06
PUM3-202ENST00000397885 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
PUM3-202ENST00000397885 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
PUM3-202ENST00000397885 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
PUM3-202ENST00000397885 FANCAO15360 1455 aa15.42■□□□□ 0.06
PUM3-202ENST00000397885 CCDC18Q5T9S5 1454 aa15.42■□□□□ 0.06
PUM3-202ENST00000397885 PLCH2O75038 1416 aa15.41■□□□□ 0.06
PUM3-202ENST00000397885 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
PUM3-202ENST00000397885 SMG6Q86US8 1419 aaKnown RBP15.41■□□□□ 0.06
PUM3-202ENST00000397885 RAPGEF3O95398 923 aa15.4■□□□□ 0.06
PUM3-202ENST00000397885 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
PUM3-202ENST00000397885 KIF14Q15058 1648 aa15.4■□□□□ 0.06
PUM3-202ENST00000397885 HIRIP3Q9BW71 556 aaPredicted RBP15.4■□□□□ 0.06
PUM3-202ENST00000397885 MYO5CQ9NQX4 1742 aa15.39■□□□□ 0.05
PUM3-202ENST00000397885 FRMPD1Q5SYB0 1578 aa15.39■□□□□ 0.05
PUM3-202ENST00000397885 RICTORQ6R327 1708 aa15.37■□□□□ 0.05
PUM3-202ENST00000397885 NCOA2Q15596 1464 aa15.37■□□□□ 0.05
PUM3-202ENST00000397885 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
PUM3-202ENST00000397885 TONSLQ96HA7 1378 aa15.36■□□□□ 0.05
PUM3-202ENST00000397885 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
PUM3-202ENST00000397885 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
PUM3-202ENST00000397885 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
PUM3-202ENST00000397885 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
PUM3-202ENST00000397885 MS4A1P11836 297 aa15.34■□□□□ 0.05
PUM3-202ENST00000397885 CNTLNQ9NXG0 1405 aa15.33■□□□□ 0.05
PUM3-202ENST00000397885 ZMYM4Q5VZL5 1548 aa15.33■□□□□ 0.04
PUM3-202ENST00000397885 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
PUM3-202ENST00000397885 MAGI2Q86UL8 1455 aa15.32■□□□□ 0.04
PUM3-202ENST00000397885 HFM1A2PYH4 1435 aa15.31■□□□□ 0.04
PUM3-202ENST00000397885 ARHGEF40Q8TER5 1519 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms