RNA–Protein interactions for RNA: ENST00000397412.7

CRAMP1-202, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-202ENST00000397412 HSCBQ8IWL3 235 aa20.86■□□□□ 0.93
CRAMP1-202ENST00000397412 FRAT2O75474 233 aaPredicted RBP20.85■□□□□ 0.93
CRAMP1-202ENST00000397412 MARCH6O60337 910 aa20.85■□□□□ 0.93
CRAMP1-202ENST00000397412 CHMP4BQ9H444 224 aaKnown RBP20.83■□□□□ 0.93
CRAMP1-202ENST00000397412 PLEKHD1A6NEE1 506 aa20.82■□□□□ 0.92
CRAMP1-202ENST00000397412 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
CRAMP1-202ENST00000397412 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
CRAMP1-202ENST00000397412 CARD11Q9BXL7 1154 aa20.81■□□□□ 0.92
CRAMP1-202ENST00000397412 RAD21O60216 631 aa20.8■□□□□ 0.92
CRAMP1-202ENST00000397412 STK26Q9P289 416 aa20.79■□□□□ 0.92
CRAMP1-202ENST00000397412 GTF2E1P29083 439 aaPredicted RBP20.78■□□□□ 0.92
CRAMP1-202ENST00000397412 TCEAL9Q9UHQ7 104 aa20.78■□□□□ 0.92
CRAMP1-202ENST00000397412 PES1O00541 588 aaKnown RBP20.77■□□□□ 0.92
CRAMP1-202ENST00000397412 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.92
CRAMP1-202ENST00000397412 PATL2C9JE40 543 aaKnown RBP20.77■□□□□ 0.91
CRAMP1-202ENST00000397412 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
CRAMP1-202ENST00000397412 GOLGA6L1Q8N7Z2 621 aa20.76■□□□□ 0.91
CRAMP1-202ENST00000397412 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
CRAMP1-202ENST00000397412 TOMM22Q9NS69 142 aa20.74■□□□□ 0.91
CRAMP1-202ENST00000397412 TPM4P67936 248 aa20.73■□□□□ 0.91
CRAMP1-202ENST00000397412 TNNT3P45378 269 aaPredicted RBP20.72■□□□□ 0.91
CRAMP1-202ENST00000397412 HDGFP51858 240 aaKnown RBP20.72■□□□□ 0.91
CRAMP1-202ENST00000397412 CTDP1Q9Y5B0 961 aaPredicted RBP20.72■□□□□ 0.91
CRAMP1-202ENST00000397412 MS4A1P11836 297 aa20.71■□□□□ 0.91
CRAMP1-202ENST00000397412 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
CRAMP1-202ENST00000397412 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
CRAMP1-202ENST00000397412 TRIM34Q9BYJ4 488 aa20.67■□□□□ 0.9
CRAMP1-202ENST00000397412 DCAF8L1A6NGE4 600 aa20.66■□□□□ 0.9
CRAMP1-202ENST00000397412 MEX3CQ5U5Q3 659 aaKnown RBP20.66■□□□□ 0.9
CRAMP1-202ENST00000397412 TRIM6-TRIM34B2RNG4 842 aa20.66■□□□□ 0.9
CRAMP1-202ENST00000397412 FBXW7Q969H0 707 aa20.65■□□□□ 0.9
CRAMP1-202ENST00000397412 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
CRAMP1-202ENST00000397412 GPATCH3Q96I76 525 aa20.63■□□□□ 0.89
CRAMP1-202ENST00000397412 SAMD1Q6SPF0 538 aaPredicted RBP20.62■□□□□ 0.89
CRAMP1-202ENST00000397412 GZF1Q9H116 711 aaPredicted RBP20.62■□□□□ 0.89
CRAMP1-202ENST00000397412 TPD52L1Q16890 204 aaPredicted RBP20.62■□□□□ 0.89
CRAMP1-202ENST00000397412 MIER1Q8N108 512 aa20.62■□□□□ 0.89
CRAMP1-202ENST00000397412 CCDC34Q96HJ3 373 aa20.61■□□□□ 0.89
CRAMP1-202ENST00000397412 NOL8Q76FK4 1167 aaKnown RBP20.6■□□□□ 0.89
CRAMP1-202ENST00000397412 HTATSF1O43719 755 aaKnown RBP20.6■□□□□ 0.89
CRAMP1-202ENST00000397412 MORC1Q86VD1 984 aa20.6■□□□□ 0.89
CRAMP1-202ENST00000397412 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.59■□□□□ 0.894e-6■■■■■ 66.1
CRAMP1-202ENST00000397412 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
CRAMP1-202ENST00000397412 TPM3P06753 285 aa20.56■□□□□ 0.88
CRAMP1-202ENST00000397412 EVA1CP58658 441 aa20.55■□□□□ 0.88
CRAMP1-202ENST00000397412 LTV1Q96GA3 475 aaPredicted RBP20.55■□□□□ 0.88
CRAMP1-202ENST00000397412 KANK1Q14678 1352 aa20.54■□□□□ 0.88
CRAMP1-202ENST00000397412 SLC4A10Q6U841 1118 aa20.53■□□□□ 0.88
CRAMP1-202ENST00000397412 NOP58Q9Y2X3 529 aaKnown RBP20.52■□□□□ 0.88
CRAMP1-202ENST00000397412 ITPRIPQ8IWB1 547 aa20.51■□□□□ 0.87
CRAMP1-202ENST00000397412 GGT6Q6P531 493 aa20.51■□□□□ 0.87
CRAMP1-202ENST00000397412 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
CRAMP1-202ENST00000397412 TSR1Q2NL82 804 aaKnown RBP20.51■□□□□ 0.87
CRAMP1-202ENST00000397412 CCAR2Q8N163 923 aaKnown RBP20.5■□□□□ 0.87
CRAMP1-202ENST00000397412 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
CRAMP1-202ENST00000397412 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
CRAMP1-202ENST00000397412 TMF1P82094 1093 aa20.48■□□□□ 0.87
CRAMP1-202ENST00000397412 FOXD4L5Q5VV16 416 aaPredicted RBP20.48■□□□□ 0.87
CRAMP1-202ENST00000397412 FOXD4L4Q8WXT5 416 aaPredicted RBP20.48■□□□□ 0.87
CRAMP1-202ENST00000397412 DCAF11Q8TEB1 546 aa20.48■□□□□ 0.87
CRAMP1-202ENST00000397412 CFAP44Q96MT7 982 aa20.47■□□□□ 0.87
CRAMP1-202ENST00000397412 NUTM2FA1L443 756 aa20.47■□□□□ 0.87
CRAMP1-202ENST00000397412 SETQ01105 290 aaPredicted RBP20.47■□□□□ 0.87
CRAMP1-202ENST00000397412 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
CRAMP1-202ENST00000397412 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
CRAMP1-202ENST00000397412 PCMTD1Q96MG8 357 aaPredicted RBP20.46■□□□□ 0.87
CRAMP1-202ENST00000397412 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
CRAMP1-202ENST00000397412 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
CRAMP1-202ENST00000397412 SYAP1Q96A49 352 aaPredicted RBP20.45■□□□□ 0.86
CRAMP1-202ENST00000397412 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
CRAMP1-202ENST00000397412 TPM2P07951 284 aa20.44■□□□□ 0.86
CRAMP1-202ENST00000397412 USP35Q9P2H5 1018 aa20.44■□□□□ 0.86
CRAMP1-202ENST00000397412 PAF1Q8N7H5 531 aa20.44■□□□□ 0.86
CRAMP1-202ENST00000397412 NGEFQ8N5V2 710 aa20.44■□□□□ 0.86
CRAMP1-202ENST00000397412 SYTL4Q96C24 671 aaPredicted RBP20.44■□□□□ 0.86
CRAMP1-202ENST00000397412 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
CRAMP1-202ENST00000397412 DHX16O60231 1041 aaKnown RBP20.43■□□□□ 0.86
CRAMP1-202ENST00000397412 CCDC43Q96MW1 224 aaKnown RBP20.43■□□□□ 0.86
CRAMP1-202ENST00000397412 GBP4Q96PP9 640 aa20.43■□□□□ 0.86
CRAMP1-202ENST00000397412 IPO8O15397 1037 aaKnown RBP20.43■□□□□ 0.86
CRAMP1-202ENST00000397412 AMOTL1Q8IY63 956 aa20.42■□□□□ 0.86
CRAMP1-202ENST00000397412 H3BQV1 296 aa20.41■□□□□ 0.86
CRAMP1-202ENST00000397412 IFFO2Q5TF58 517 aa20.41■□□□□ 0.86
CRAMP1-202ENST00000397412 RRP12Q5JTH9 1297 aaKnown RBP20.4■□□□□ 0.86
CRAMP1-202ENST00000397412 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
CRAMP1-202ENST00000397412 VSIG10Q8N0Z9 540 aa20.4■□□□□ 0.86
CRAMP1-202ENST00000397412 VPS37DQ86XT2 251 aa20.39■□□□□ 0.85
CRAMP1-202ENST00000397412 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
CRAMP1-202ENST00000397412 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
CRAMP1-202ENST00000397412 SLKQ9H2G2 1235 aaPredicted RBP20.38■□□□□ 0.85
CRAMP1-202ENST00000397412 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
CRAMP1-202ENST00000397412 AMPHP49418 695 aa20.37■□□□□ 0.85
CRAMP1-202ENST00000397412 ODF2Q5BJF6 829 aa20.37■□□□□ 0.85
CRAMP1-202ENST00000397412 CSPP1Q1MSJ5 1256 aa20.37■□□□□ 0.85
CRAMP1-202ENST00000397412 CALRP27797 417 aaKnown RBP20.36■□□□□ 0.85
CRAMP1-202ENST00000397412 FOXD4L6Q3SYB3 417 aaPredicted RBP20.36■□□□□ 0.85
CRAMP1-202ENST00000397412 FOXD4L3Q6VB84 417 aaPredicted RBP20.36■□□□□ 0.85
CRAMP1-202ENST00000397412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.36■□□□□ 0.85
CRAMP1-202ENST00000397412 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
CRAMP1-202ENST00000397412 MFAP1P55081 439 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms