RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
FGFR1-208ENST00000397108 KIF14Q15058 1648 aa17.15■□□□□ 0.34
FGFR1-208ENST00000397108 KDM6BO15054 1643 aa17.14■□□□□ 0.33
FGFR1-208ENST00000397108 MYO5CQ9NQX4 1742 aa17.09■□□□□ 0.33
FGFR1-208ENST00000397108 BCANQ96GW7 911 aa17.08■□□□□ 0.33
FGFR1-208ENST00000397108 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.32
FGFR1-208ENST00000397108 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
FGFR1-208ENST00000397108 NEO1Q92859 1461 aa17.07■□□□□ 0.32
FGFR1-208ENST00000397108 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
FGFR1-208ENST00000397108 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
FGFR1-208ENST00000397108 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
FGFR1-208ENST00000397108 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
FGFR1-208ENST00000397108 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
FGFR1-208ENST00000397108 PLCH2O75038 1416 aa17.04■□□□□ 0.32
FGFR1-208ENST00000397108 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
FGFR1-208ENST00000397108 FANCAO15360 1455 aa17.03■□□□□ 0.32
FGFR1-208ENST00000397108 PREX2Q70Z35 1606 aa17.02■□□□□ 0.32
FGFR1-208ENST00000397108 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.31
FGFR1-208ENST00000397108 CDC42BPBQ9Y5S2 1711 aa17.01■□□□□ 0.31
FGFR1-208ENST00000397108 AKNAQ7Z591 1439 aa16.99■□□□□ 0.31
FGFR1-208ENST00000397108 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
FGFR1-208ENST00000397108 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
FGFR1-208ENST00000397108 CLSPNQ9HAW4 1339 aa16.98■□□□□ 0.31
FGFR1-208ENST00000397108 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
FGFR1-208ENST00000397108 FRMPD1Q5SYB0 1578 aa16.96■□□□□ 0.3
FGFR1-208ENST00000397108 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
FGFR1-208ENST00000397108 EFCAB2Q5VUJ9 269 aa16.95■□□□□ 0.3
FGFR1-208ENST00000397108 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
FGFR1-208ENST00000397108 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
FGFR1-208ENST00000397108 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
FGFR1-208ENST00000397108 DENND4BO75064 1496 aaPredicted RBP16.93■□□□□ 0.3
FGFR1-208ENST00000397108 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
FGFR1-208ENST00000397108 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
FGFR1-208ENST00000397108 APLP2Q06481 763 aa16.91■□□□□ 0.3
FGFR1-208ENST00000397108 ABCC1P33527 1531 aa16.9■□□□□ 0.3
FGFR1-208ENST00000397108 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
FGFR1-208ENST00000397108 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
FGFR1-208ENST00000397108 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
FGFR1-208ENST00000397108 ZMYM4Q5VZL5 1548 aa16.89■□□□□ 0.29
FGFR1-208ENST00000397108 RAPGEF3O95398 923 aa16.89■□□□□ 0.29
FGFR1-208ENST00000397108 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.29
FGFR1-208ENST00000397108 FKBP8Q14318 412 aa16.87■□□□□ 0.29
FGFR1-208ENST00000397108 CFDP1Q9UEE9 299 aaPredicted RBP16.85■□□□□ 0.29
FGFR1-208ENST00000397108 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
FGFR1-208ENST00000397108 ZNF518AQ6AHZ1 1483 aa16.85■□□□□ 0.29
FGFR1-208ENST00000397108 KDM5CP41229 1560 aa16.84■□□□□ 0.29
FGFR1-208ENST00000397108 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
FGFR1-208ENST00000397108 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
FGFR1-208ENST00000397108 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
FGFR1-208ENST00000397108 ARHGEF40Q8TER5 1519 aa16.84■□□□□ 0.29
FGFR1-208ENST00000397108 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.28
FGFR1-208ENST00000397108 MAGI2Q86UL8 1455 aa16.83■□□□□ 0.28
FGFR1-208ENST00000397108 KIAA1107Q9UPP5 1409 aa16.82■□□□□ 0.28
FGFR1-208ENST00000397108 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
FGFR1-208ENST00000397108 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
FGFR1-208ENST00000397108 ITGAEP38570 1179 aa16.8■□□□□ 0.28
FGFR1-208ENST00000397108 MYOM3Q5VTT5 1437 aa16.8■□□□□ 0.28
FGFR1-208ENST00000397108 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
FGFR1-208ENST00000397108 HECW2Q9P2P5 1572 aa16.8■□□□□ 0.28
FGFR1-208ENST00000397108 CAMSAP2Q08AD1 1489 aa16.78■□□□□ 0.28
FGFR1-208ENST00000397108 MIA2Q96PC5 1412 aa16.78■□□□□ 0.28
FGFR1-208ENST00000397108 AFAP1Q8N556 730 aa16.77■□□□□ 0.28
FGFR1-208ENST00000397108 MLH3Q9UHC1 1453 aa16.76■□□□□ 0.27
FGFR1-208ENST00000397108 ZNF644Q9H582 1327 aaPredicted RBP16.76■□□□□ 0.27
FGFR1-208ENST00000397108 YEATS2Q9ULM3 1422 aa16.76■□□□□ 0.27
FGFR1-208ENST00000397108 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
FGFR1-208ENST00000397108 KIDINS220Q9ULH0 1771 aa16.75■□□□□ 0.27
FGFR1-208ENST00000397108 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.276e-6■□□□□ 8.8
FGFR1-208ENST00000397108 MSH5O43196 834 aa16.74■□□□□ 0.27
FGFR1-208ENST00000397108 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
FGFR1-208ENST00000397108 ABCA6Q8N139 1617 aa16.73■□□□□ 0.27
FGFR1-208ENST00000397108 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
FGFR1-208ENST00000397108 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
FGFR1-208ENST00000397108 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
FGFR1-208ENST00000397108 ATP10AO60312 1499 aa16.71■□□□□ 0.27
FGFR1-208ENST00000397108 SIGLEC1Q9BZZ2 1709 aa16.71■□□□□ 0.27
FGFR1-208ENST00000397108 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
FGFR1-208ENST00000397108 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
FGFR1-208ENST00000397108 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.26
FGFR1-208ENST00000397108 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
FGFR1-208ENST00000397108 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
FGFR1-208ENST00000397108 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
FGFR1-208ENST00000397108 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
FGFR1-208ENST00000397108 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
FGFR1-208ENST00000397108 BCORL1Q5H9F3 1711 aa16.68■□□□□ 0.26
FGFR1-208ENST00000397108 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
FGFR1-208ENST00000397108 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
FGFR1-208ENST00000397108 KDM4FA0A1W2PPD8 638 aa16.66■□□□□ 0.26
FGFR1-208ENST00000397108 ADGBQ8N7X0 1667 aa16.66■□□□□ 0.26
FGFR1-208ENST00000397108 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
FGFR1-208ENST00000397108 MAST1Q9Y2H9 1570 aa16.65■□□□□ 0.26
FGFR1-208ENST00000397108 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
FGFR1-208ENST00000397108 NEFLP07196 543 aa16.64■□□□□ 0.25
FGFR1-208ENST00000397108 DNMT1P26358 1616 aaKnown RBP16.63■□□□□ 0.25
FGFR1-208ENST00000397108 AGLP35573 1532 aa16.63■□□□□ 0.25
FGFR1-208ENST00000397108 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
FGFR1-208ENST00000397108 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
FGFR1-208ENST00000397108 ERICH6Q7L0X2 663 aa16.61■□□□□ 0.25
FGFR1-208ENST00000397108 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
FGFR1-208ENST00000397108 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms