RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 MAGI2Q86UL8 1455 aa20.12■□□□□ 0.81
PSMA1-201ENST00000396394 POGZQ7Z3K3 1410 aa20.12■□□□□ 0.81
PSMA1-201ENST00000396394 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
PSMA1-201ENST00000396394 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.8
PSMA1-201ENST00000396394 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
PSMA1-201ENST00000396394 ARHGEF40Q8TER5 1519 aa20.06■□□□□ 0.8
PSMA1-201ENST00000396394 CDC42BPBQ9Y5S2 1711 aa20.06■□□□□ 0.8
PSMA1-201ENST00000396394 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
PSMA1-201ENST00000396394 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
PSMA1-201ENST00000396394 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
PSMA1-201ENST00000396394 AFAP1Q8N556 730 aa20.04■□□□□ 0.8
PSMA1-201ENST00000396394 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
PSMA1-201ENST00000396394 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
PSMA1-201ENST00000396394 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
PSMA1-201ENST00000396394 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
PSMA1-201ENST00000396394 CDC42BPAQ5VT25 1732 aa20■□□□□ 0.79
PSMA1-201ENST00000396394 CFDP1Q9UEE9 299 aaPredicted RBP20■□□□□ 0.79
PSMA1-201ENST00000396394 KDM5CP41229 1560 aa19.99■□□□□ 0.79
PSMA1-201ENST00000396394 EHBP1L1Q8N3D4 1523 aa19.99■□□□□ 0.79
PSMA1-201ENST00000396394 ABCC1P33527 1531 aa19.98■□□□□ 0.79
PSMA1-201ENST00000396394 ATP10AO60312 1499 aa19.98■□□□□ 0.79
PSMA1-201ENST00000396394 ZNF777Q9ULD5 760 aaPredicted RBP19.98■□□□□ 0.79
PSMA1-201ENST00000396394 ADAMTSL3P82987 1691 aa19.98■□□□□ 0.79
PSMA1-201ENST00000396394 ARHGEF12Q9NZN5 1544 aa19.97■□□□□ 0.79
PSMA1-201ENST00000396394 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
PSMA1-201ENST00000396394 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
PSMA1-201ENST00000396394 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
PSMA1-201ENST00000396394 MYT1LQ9UL68 1186 aa19.96■□□□□ 0.79
PSMA1-201ENST00000396394 C9orf84Q5VXU9 1444 aa19.95■□□□□ 0.78
PSMA1-201ENST00000396394 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
PSMA1-201ENST00000396394 PTPRMP28827 1452 aa19.93■□□□□ 0.78
PSMA1-201ENST00000396394 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
PSMA1-201ENST00000396394 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
PSMA1-201ENST00000396394 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
PSMA1-201ENST00000396394 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
PSMA1-201ENST00000396394 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
PSMA1-201ENST00000396394 SAMD9LQ8IVG5 1584 aa19.92■□□□□ 0.78
PSMA1-201ENST00000396394 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
PSMA1-201ENST00000396394 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
PSMA1-201ENST00000396394 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
PSMA1-201ENST00000396394 MADDQ8WXG6 1647 aa19.88■□□□□ 0.77
PSMA1-201ENST00000396394 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
PSMA1-201ENST00000396394 SIGLEC1Q9BZZ2 1709 aa19.88■□□□□ 0.77
PSMA1-201ENST00000396394 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
PSMA1-201ENST00000396394 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
PSMA1-201ENST00000396394 MLECQ14165 292 aa19.87■□□□□ 0.77
PSMA1-201ENST00000396394 SPAG9O60271 1321 aaKnown RBP19.87■□□□□ 0.77
PSMA1-201ENST00000396394 REREQ9P2R6 1566 aa19.87■□□□□ 0.77
PSMA1-201ENST00000396394 SUPT6HQ7KZ85 1726 aaKnown RBP19.87■□□□□ 0.77
PSMA1-201ENST00000396394 DIP2CQ9Y2E4 1556 aa19.86■□□□□ 0.77
PSMA1-201ENST00000396394 HRCP23327 699 aa19.85■□□□□ 0.77
PSMA1-201ENST00000396394 ZNF644Q9H582 1327 aaPredicted RBP19.85■□□□□ 0.77
PSMA1-201ENST00000396394 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.77
PSMA1-201ENST00000396394 ABCA6Q8N139 1617 aa19.83■□□□□ 0.77
PSMA1-201ENST00000396394 KIDINS220Q9ULH0 1771 aa19.83■□□□□ 0.77
PSMA1-201ENST00000396394 APLP2Q06481 763 aa19.82■□□□□ 0.76
PSMA1-201ENST00000396394 KANK4Q5T7N3 995 aaPredicted RBP19.82■□□□□ 0.76
PSMA1-201ENST00000396394 AGLP35573 1532 aa19.82■□□□□ 0.76
PSMA1-201ENST00000396394 MBD5Q9P267 1494 aa19.82■□□□□ 0.76
PSMA1-201ENST00000396394 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
PSMA1-201ENST00000396394 ATP7AQ04656 1500 aa19.77■□□□□ 0.76
PSMA1-201ENST00000396394 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
PSMA1-201ENST00000396394 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
PSMA1-201ENST00000396394 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
PSMA1-201ENST00000396394 INO80Q9ULG1 1556 aaPredicted RBP19.75■□□□□ 0.75
PSMA1-201ENST00000396394 ESF1Q9H501 851 aaKnown RBP19.73■□□□□ 0.75
PSMA1-201ENST00000396394 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
PSMA1-201ENST00000396394 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
PSMA1-201ENST00000396394 A2MP01023 1474 aa19.72■□□□□ 0.75
PSMA1-201ENST00000396394 CCDC141Q6ZP82 1450 aa19.72■□□□□ 0.75
PSMA1-201ENST00000396394 MYOM3Q5VTT5 1437 aa19.71■□□□□ 0.75
PSMA1-201ENST00000396394 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
PSMA1-201ENST00000396394 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
PSMA1-201ENST00000396394 CEBPAP49715 358 aaPredicted RBP19.69■□□□□ 0.74
PSMA1-201ENST00000396394 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
PSMA1-201ENST00000396394 ARHGEF5Q12774 1597 aa19.69■□□□□ 0.74
PSMA1-201ENST00000396394 PLXNC1O60486 1568 aa19.68■□□□□ 0.74
PSMA1-201ENST00000396394 LMTK3Q96Q04 1460 aa19.68■□□□□ 0.74
PSMA1-201ENST00000396394 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
PSMA1-201ENST00000396394 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
PSMA1-201ENST00000396394 ADGBQ8N7X0 1667 aa19.66■□□□□ 0.74
PSMA1-201ENST00000396394 GGT6Q6P531 493 aa19.64■□□□□ 0.73
PSMA1-201ENST00000396394 ZMYM3Q14202 1370 aa19.61■□□□□ 0.73
PSMA1-201ENST00000396394 SETD1BQ9UPS6 1966 aaKnown RBP19.58■□□□□ 0.73
PSMA1-201ENST00000396394 KIF3BO15066 747 aa19.58■□□□□ 0.73
PSMA1-201ENST00000396394 HSPA2P54652 639 aa19.58■□□□□ 0.73
PSMA1-201ENST00000396394 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.73
PSMA1-201ENST00000396394 C3P01024 1663 aa19.58■□□□□ 0.72
PSMA1-201ENST00000396394 MROH2AA6NES4 1674 aa19.56■□□□□ 0.72
PSMA1-201ENST00000396394 UHRF1BP1Q6BDS2 1440 aa19.56■□□□□ 0.72
PSMA1-201ENST00000396394 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
PSMA1-201ENST00000396394 PREX1Q8TCU6 1659 aa19.56■□□□□ 0.72
PSMA1-201ENST00000396394 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
PSMA1-201ENST00000396394 NPATQ14207 1427 aa19.55■□□□□ 0.72
PSMA1-201ENST00000396394 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
PSMA1-201ENST00000396394 ABCC5O15440 1437 aa19.52■□□□□ 0.72
PSMA1-201ENST00000396394 CLTCQ00610 1675 aaKnown RBP19.51■□□□□ 0.71
PSMA1-201ENST00000396394 SHANK2Q9UPX8 1470 aa19.51■□□□□ 0.71
PSMA1-201ENST00000396394 FAM135AQ9P2D6 1515 aa19.5■□□□□ 0.71
PSMA1-201ENST00000396394 DAPK1P53355 1430 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms