RNA–Protein interactions for RNA: ENST00000396191.5

PDE1C-205, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-205ENST00000396191 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
PDE1C-205ENST00000396191 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
PDE1C-205ENST00000396191 TCERG1O14776 1098 aaKnown RBP18.45■□□□□ 0.54
PDE1C-205ENST00000396191 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
PDE1C-205ENST00000396191 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
PDE1C-205ENST00000396191 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
PDE1C-205ENST00000396191 PLIN1O60240 522 aa18.44■□□□□ 0.54
PDE1C-205ENST00000396191 IGF1RP08069 1367 aa18.44■□□□□ 0.54
PDE1C-205ENST00000396191 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
PDE1C-205ENST00000396191 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
PDE1C-205ENST00000396191 NCOA1Q15788 1441 aa18.42■□□□□ 0.54
PDE1C-205ENST00000396191 FGD6Q6ZV73 1430 aa18.42■□□□□ 0.54
PDE1C-205ENST00000396191 RRP1P56182 461 aaKnown RBP18.42■□□□□ 0.54
PDE1C-205ENST00000396191 NAIPQ13075 1403 aa18.41■□□□□ 0.54
PDE1C-205ENST00000396191 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
PDE1C-205ENST00000396191 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
PDE1C-205ENST00000396191 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
PDE1C-205ENST00000396191 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
PDE1C-205ENST00000396191 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
PDE1C-205ENST00000396191 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
PDE1C-205ENST00000396191 PTPN23Q9H3S7 1636 aa18.37■□□□□ 0.53
PDE1C-205ENST00000396191 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
PDE1C-205ENST00000396191 RCAN3Q9UKA8 241 aa18.36■□□□□ 0.53
PDE1C-205ENST00000396191 PNISRQ8TF01 805 aaKnown RBP18.36■□□□□ 0.53
PDE1C-205ENST00000396191 HOMEZQ8IX15 550 aa18.35■□□□□ 0.53
PDE1C-205ENST00000396191 FMN1Q68DA7 1419 aa18.35■□□□□ 0.53
PDE1C-205ENST00000396191 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
PDE1C-205ENST00000396191 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
PDE1C-205ENST00000396191 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
PDE1C-205ENST00000396191 ARID3CA6NKF2 412 aa18.31■□□□□ 0.52
PDE1C-205ENST00000396191 DDRGK1Q96HY6 314 aa18.31■□□□□ 0.52
PDE1C-205ENST00000396191 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
PDE1C-205ENST00000396191 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
PDE1C-205ENST00000396191 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
PDE1C-205ENST00000396191 DHX29Q7Z478 1369 aaKnown RBP18.28■□□□□ 0.52
PDE1C-205ENST00000396191 MS4A1P11836 297 aa18.28■□□□□ 0.52
PDE1C-205ENST00000396191 CRBNQ96SW2 442 aa18.27■□□□□ 0.52
PDE1C-205ENST00000396191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDE1C-205ENST00000396191 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
PDE1C-205ENST00000396191 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
PDE1C-205ENST00000396191 RRAGDQ9NQL2 400 aaPredicted RBP18.23■□□□□ 0.51
PDE1C-205ENST00000396191 C20orf194Q5TEA3 1177 aa18.23■□□□□ 0.51
PDE1C-205ENST00000396191 RGS3P49796 1198 aa18.22■□□□□ 0.51
PDE1C-205ENST00000396191 POGKQ9P215 609 aa18.22■□□□□ 0.51
PDE1C-205ENST00000396191 KDM6BO15054 1643 aa18.21■□□□□ 0.51
PDE1C-205ENST00000396191 CASKIN1Q8WXD9 1431 aa18.19■□□□□ 0.5
PDE1C-205ENST00000396191 SLC4A1APQ9BWU0 796 aaKnown RBP18.19■□□□□ 0.5
PDE1C-205ENST00000396191 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
PDE1C-205ENST00000396191 CFTRP13569 1480 aa18.18■□□□□ 0.5
PDE1C-205ENST00000396191 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
PDE1C-205ENST00000396191 ZMYND15Q9H091 742 aa18.18■□□□□ 0.5
PDE1C-205ENST00000396191 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
PDE1C-205ENST00000396191 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
PDE1C-205ENST00000396191 DHX37Q8IY37 1157 aaKnown RBP18.15■□□□□ 0.5
PDE1C-205ENST00000396191 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
PDE1C-205ENST00000396191 FGD1P98174 961 aa18.14■□□□□ 0.49
PDE1C-205ENST00000396191 USP47Q96K76 1375 aa18.14■□□□□ 0.49
PDE1C-205ENST00000396191 SLKQ9H2G2 1235 aaPredicted RBP18.14■□□□□ 0.49
PDE1C-205ENST00000396191 NESP48681 1621 aa18.13■□□□□ 0.49
PDE1C-205ENST00000396191 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
PDE1C-205ENST00000396191 A0A0U1RQG5 324 aaPredicted RBP18.13■□□□□ 0.49
PDE1C-205ENST00000396191 C8orf34Q49A92 452 aa18.11■□□□□ 0.49
PDE1C-205ENST00000396191 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
PDE1C-205ENST00000396191 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
PDE1C-205ENST00000396191 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
PDE1C-205ENST00000396191 CHMP4AQ9BY43 222 aa18.09■□□□□ 0.49
PDE1C-205ENST00000396191 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.49
PDE1C-205ENST00000396191 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
PDE1C-205ENST00000396191 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
PDE1C-205ENST00000396191 GLIPR1L2Q4G1C9 344 aa18.07■□□□□ 0.48
PDE1C-205ENST00000396191 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
PDE1C-205ENST00000396191 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
PDE1C-205ENST00000396191 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
PDE1C-205ENST00000396191 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
PDE1C-205ENST00000396191 RPRD2Q5VT52 1461 aaKnown RBP18.05■□□□□ 0.48
PDE1C-205ENST00000396191 TEX14Q8IWB6 1497 aa18.05■□□□□ 0.48
PDE1C-205ENST00000396191 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
PDE1C-205ENST00000396191 SPRYD3Q8NCJ5 442 aa18.05■□□□□ 0.48
PDE1C-205ENST00000396191 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
PDE1C-205ENST00000396191 HSP90AA2PQ14568 343 aaPredicted RBP18.03■□□□□ 0.48
PDE1C-205ENST00000396191 PANK2Q9BZ23 570 aa18.03■□□□□ 0.48
PDE1C-205ENST00000396191 TAOK2Q9UL54 1235 aa18.02■□□□□ 0.48
PDE1C-205ENST00000396191 KIF15Q9NS87 1388 aa18.02■□□□□ 0.47
PDE1C-205ENST00000396191 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.47
PDE1C-205ENST00000396191 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
PDE1C-205ENST00000396191 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
PDE1C-205ENST00000396191 PNNQ9H307 717 aaKnown RBP18■□□□□ 0.47
PDE1C-205ENST00000396191 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
PDE1C-205ENST00000396191 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
PDE1C-205ENST00000396191 SEC24BO95487 1268 aa18■□□□□ 0.47
PDE1C-205ENST00000396191 TAF7LQ5H9L4 462 aa18■□□□□ 0.47
PDE1C-205ENST00000396191 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
PDE1C-205ENST00000396191 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
PDE1C-205ENST00000396191 KTN1Q86UP2 1357 aaKnown RBP17.99■□□□□ 0.47
PDE1C-205ENST00000396191 C14orf37Q86TY3 774 aa17.99■□□□□ 0.47
PDE1C-205ENST00000396191 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
PDE1C-205ENST00000396191 CENPQQ7L2Z9 268 aaPredicted RBP17.98■□□□□ 0.47
PDE1C-205ENST00000396191 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
PDE1C-205ENST00000396191 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
PDE1C-205ENST00000396191 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms