RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
SIN3A-202ENST00000394947 BCL11BQ9C0K0 894 aaPredicted RBP15.55■□□□□ 0.08
SIN3A-202ENST00000394947 RASSF8Q8NHQ8 419 aa15.54■□□□□ 0.08
SIN3A-202ENST00000394947 SIN3AQ96ST3 1273 aa15.54■□□□□ 0.08
SIN3A-202ENST00000394947 PES1O00541 588 aaKnown RBP15.53■□□□□ 0.08
SIN3A-202ENST00000394947 FOXD4L6Q3SYB3 417 aaPredicted RBP15.53■□□□□ 0.08
SIN3A-202ENST00000394947 FOXD4L3Q6VB84 417 aaPredicted RBP15.53■□□□□ 0.08
SIN3A-202ENST00000394947 STK26Q9P289 416 aa15.53■□□□□ 0.08
SIN3A-202ENST00000394947 KIAA1211Q6ZU35 1233 aa15.52■□□□□ 0.08
SIN3A-202ENST00000394947 SRPK2P78362 688 aaKnown RBP15.52■□□□□ 0.07
SIN3A-202ENST00000394947 GOLGA6L1Q8N7Z2 621 aa15.51■□□□□ 0.07
SIN3A-202ENST00000394947 MFAP1P55081 439 aaKnown RBP15.5■□□□□ 0.07
SIN3A-202ENST00000394947 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
SIN3A-202ENST00000394947 CCAR2Q8N163 923 aaKnown RBP15.49■□□□□ 0.07
SIN3A-202ENST00000394947 ITPRIPQ8IWB1 547 aa15.49■□□□□ 0.07
SIN3A-202ENST00000394947 RTF1Q92541 710 aaKnown RBP15.48■□□□□ 0.07
SIN3A-202ENST00000394947 TOMM22Q9NS69 142 aa15.46■□□□□ 0.07
SIN3A-202ENST00000394947 GORABQ5T7V8 394 aa15.46■□□□□ 0.07
SIN3A-202ENST00000394947 G3V3G9 751 aa15.46■□□□□ 0.07
SIN3A-202ENST00000394947 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
SIN3A-202ENST00000394947 CSB-PGBD3P0DP91 1061 aa15.46■□□□□ 0.07
SIN3A-202ENST00000394947 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
SIN3A-202ENST00000394947 PTMSP20962 102 aa15.45■□□□□ 0.06
SIN3A-202ENST00000394947 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
SIN3A-202ENST00000394947 TAF7LQ5H9L4 462 aa15.44■□□□□ 0.06
SIN3A-202ENST00000394947 RAD21O60216 631 aa15.44■□□□□ 0.06
SIN3A-202ENST00000394947 KRI1Q8N9T8 703 aaKnown RBP15.43■□□□□ 0.06
SIN3A-202ENST00000394947 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
SIN3A-202ENST00000394947 RBM19Q9Y4C8 960 aaKnown RBP15.42■□□□□ 0.06
SIN3A-202ENST00000394947 TPM4P67936 248 aa15.42■□□□□ 0.06
SIN3A-202ENST00000394947 MARCH6O60337 910 aa15.41■□□□□ 0.06
SIN3A-202ENST00000394947 CEP89Q96ST8 783 aa15.41■□□□□ 0.06
SIN3A-202ENST00000394947 SLC4A10Q6U841 1118 aa15.41■□□□□ 0.06
SIN3A-202ENST00000394947 DCAF11Q8TEB1 546 aa15.4■□□□□ 0.06
SIN3A-202ENST00000394947 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
SIN3A-202ENST00000394947 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
SIN3A-202ENST00000394947 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
SIN3A-202ENST00000394947 CHMP4BQ9H444 224 aaKnown RBP15.38■□□□□ 0.05
SIN3A-202ENST00000394947 ZNF592Q92610 1267 aa15.37■□□□□ 0.05
SIN3A-202ENST00000394947 FBXW7Q969H0 707 aa15.37■□□□□ 0.05
SIN3A-202ENST00000394947 MS4A1P11836 297 aa15.37■□□□□ 0.05
SIN3A-202ENST00000394947 GOLGA6L3A6NEY3 463 aa15.37■□□□□ 0.05
SIN3A-202ENST00000394947 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
SIN3A-202ENST00000394947 FRAT2O75474 233 aaPredicted RBP15.37■□□□□ 0.05
SIN3A-202ENST00000394947 CFDP1Q9UEE9 299 aaPredicted RBP15.37■□□□□ 0.05
SIN3A-202ENST00000394947 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
SIN3A-202ENST00000394947 TPD52L1Q16890 204 aaPredicted RBP15.36■□□□□ 0.05
SIN3A-202ENST00000394947 CCDC146Q8IYE0 955 aa15.36■□□□□ 0.05
SIN3A-202ENST00000394947 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
SIN3A-202ENST00000394947 SLC4A3P48751 1232 aa15.34■□□□□ 0.05
SIN3A-202ENST00000394947 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
SIN3A-202ENST00000394947 TPM3P06753 285 aa15.34■□□□□ 0.05
SIN3A-202ENST00000394947 LTV1Q96GA3 475 aaPredicted RBP15.34■□□□□ 0.05
SIN3A-202ENST00000394947 FOXD1Q16676 465 aa15.34■□□□□ 0.05
SIN3A-202ENST00000394947 SETQ01105 290 aaPredicted RBP15.33■□□□□ 0.04
SIN3A-202ENST00000394947 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
SIN3A-202ENST00000394947 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
SIN3A-202ENST00000394947 NUTM2FA1L443 756 aa15.32■□□□□ 0.04
SIN3A-202ENST00000394947 TIMELESSQ9UNS1 1208 aa15.32■□□□□ 0.04
SIN3A-202ENST00000394947 TMF1P82094 1093 aa15.31■□□□□ 0.04
SIN3A-202ENST00000394947 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
SIN3A-202ENST00000394947 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
SIN3A-202ENST00000394947 FOSBP53539 338 aa15.31■□□□□ 0.04
SIN3A-202ENST00000394947 SF3A1Q15459 793 aaKnown RBP15.31■□□□□ 0.04
SIN3A-202ENST00000394947 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
SIN3A-202ENST00000394947 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
SIN3A-202ENST00000394947 ZNF771Q7L3S4 317 aaPredicted RBP15.3■□□□□ 0.04
SIN3A-202ENST00000394947 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
SIN3A-202ENST00000394947 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
SIN3A-202ENST00000394947 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
SIN3A-202ENST00000394947 CALRP27797 417 aaKnown RBP15.29■□□□□ 0.04
SIN3A-202ENST00000394947 DHX37Q8IY37 1157 aaKnown RBP15.28■□□□□ 0.04
SIN3A-202ENST00000394947 MSH5O43196 834 aa15.28■□□□□ 0.04
SIN3A-202ENST00000394947 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
SIN3A-202ENST00000394947 RILPL2Q969X0 211 aa15.27■□□□□ 0.04
SIN3A-202ENST00000394947 CLIP1P30622 1438 aa15.27■□□□□ 0.03
SIN3A-202ENST00000394947 KDM4AO75164 1064 aa15.27■□□□□ 0.03
SIN3A-202ENST00000394947 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.03
SIN3A-202ENST00000394947 H3BQV1 296 aa15.26■□□□□ 0.03
SIN3A-202ENST00000394947 SKIDA1Q1XH10 827 aa15.26■□□□□ 0.03
SIN3A-202ENST00000394947 IFFO2Q5TF58 517 aa15.26■□□□□ 0.03
SIN3A-202ENST00000394947 MCTP1Q6DN14 999 aa15.25■□□□□ 0.03
SIN3A-202ENST00000394947 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
SIN3A-202ENST00000394947 GPATCH3Q96I76 525 aa15.25■□□□□ 0.03
SIN3A-202ENST00000394947 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
SIN3A-202ENST00000394947 GGT6Q6P531 493 aa15.24■□□□□ 0.03
SIN3A-202ENST00000394947 DCAF1Q9Y4B6 1507 aa15.24■□□□□ 0.03
SIN3A-202ENST00000394947 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
SIN3A-202ENST00000394947 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
SIN3A-202ENST00000394947 TCEAL9Q9UHQ7 104 aa15.22■□□□□ 0.03
SIN3A-202ENST00000394947 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
SIN3A-202ENST00000394947 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
SIN3A-202ENST00000394947 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
SIN3A-202ENST00000394947 RRP7AQ9Y3A4 280 aaKnown RBP15.21■□□□□ 0.03
SIN3A-202ENST00000394947 TSR1Q2NL82 804 aaKnown RBP15.2■□□□□ 0.02
SIN3A-202ENST00000394947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.02
SIN3A-202ENST00000394947 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
SIN3A-202ENST00000394947 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
SIN3A-202ENST00000394947 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
SIN3A-202ENST00000394947 STK31Q9BXU1 1019 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms