RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CAMSAP2Q08AD1 1489 aa22.25■■□□□ 1.15
CPSF7-202ENST00000394888 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
CPSF7-202ENST00000394888 ZNF644Q9H582 1327 aaPredicted RBP22.24■■□□□ 1.15
CPSF7-202ENST00000394888 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
CPSF7-202ENST00000394888 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
CPSF7-202ENST00000394888 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
CPSF7-202ENST00000394888 SHROOM2Q13796 1616 aa22.21■■□□□ 1.15
CPSF7-202ENST00000394888 TEX14Q8IWB6 1497 aa22.2■■□□□ 1.15
CPSF7-202ENST00000394888 POLR1AO95602 1720 aaPredicted RBP22.2■■□□□ 1.14
CPSF7-202ENST00000394888 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
CPSF7-202ENST00000394888 PZPP20742 1482 aa22.2■■□□□ 1.14
CPSF7-202ENST00000394888 CHIC2Q9UKJ5 165 aa22.19■■□□□ 1.14
CPSF7-202ENST00000394888 CDC42BPBQ9Y5S2 1711 aa22.16■■□□□ 1.14
CPSF7-202ENST00000394888 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
CPSF7-202ENST00000394888 ATP10BO94823 1461 aa22.15■■□□□ 1.14
CPSF7-202ENST00000394888 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.13
CPSF7-202ENST00000394888 RPRD2Q5VT52 1461 aaKnown RBP22.13■■□□□ 1.13
CPSF7-202ENST00000394888 TONSLQ96HA7 1378 aa22.12■■□□□ 1.13
CPSF7-202ENST00000394888 NCOA1Q15788 1441 aa22.11■■□□□ 1.13
CPSF7-202ENST00000394888 MBD5Q9P267 1494 aa22.1■■□□□ 1.13
CPSF7-202ENST00000394888 DDX10Q13206 875 aaKnown RBP22.09■■□□□ 1.13
CPSF7-202ENST00000394888 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
CPSF7-202ENST00000394888 JPH4Q96JJ6 628 aa22.08■■□□□ 1.13
CPSF7-202ENST00000394888 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
CPSF7-202ENST00000394888 PREX2Q70Z35 1606 aa22.07■■□□□ 1.12
CPSF7-202ENST00000394888 ERCC6L2Q5T890 1561 aa22.06■■□□□ 1.12
CPSF7-202ENST00000394888 SAMD9LQ8IVG5 1584 aa22.05■■□□□ 1.12
CPSF7-202ENST00000394888 FOXD1Q16676 465 aa22.04■■□□□ 1.12
CPSF7-202ENST00000394888 CARMIL2Q6F5E8 1435 aa22.04■■□□□ 1.12
CPSF7-202ENST00000394888 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
CPSF7-202ENST00000394888 KDM5DQ9BY66 1539 aa22.02■■□□□ 1.12
CPSF7-202ENST00000394888 ARHGEF5Q12774 1597 aa22.02■■□□□ 1.12
CPSF7-202ENST00000394888 SPATA31E1Q6ZUB1 1445 aa22.02■■□□□ 1.12
CPSF7-202ENST00000394888 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
CPSF7-202ENST00000394888 BCORL1Q5H9F3 1711 aa21.98■■□□□ 1.11
CPSF7-202ENST00000394888 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
CPSF7-202ENST00000394888 NBPF8Q3BBV2 869 aa21.95■■□□□ 1.11
CPSF7-202ENST00000394888 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
CPSF7-202ENST00000394888 C11orf95C9JLR9 678 aaPredicted RBP21.93■■□□□ 1.1
CPSF7-202ENST00000394888 PTPRGP23470 1445 aa21.92■■□□□ 1.1
CPSF7-202ENST00000394888 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
CPSF7-202ENST00000394888 FBLN2P98095 1184 aa21.91■■□□□ 1.1
CPSF7-202ENST00000394888 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
CPSF7-202ENST00000394888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
CPSF7-202ENST00000394888 HSPA5P11021 654 aaKnown RBP21.9■■□□□ 1.1
CPSF7-202ENST00000394888 KDM5CP41229 1560 aa21.9■■□□□ 1.1
CPSF7-202ENST00000394888 CCER2I3L3R5 266 aa21.89■■□□□ 1.1
CPSF7-202ENST00000394888 MAST1Q9Y2H9 1570 aa21.89■■□□□ 1.09
CPSF7-202ENST00000394888 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
CPSF7-202ENST00000394888 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
CPSF7-202ENST00000394888 CFDP1Q9UEE9 299 aaPredicted RBP21.88■■□□□ 1.09
CPSF7-202ENST00000394888 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
CPSF7-202ENST00000394888 C9orf84Q5VXU9 1444 aa21.88■■□□□ 1.09
CPSF7-202ENST00000394888 UNC13BO14795 1591 aa21.86■■□□□ 1.09
CPSF7-202ENST00000394888 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
CPSF7-202ENST00000394888 ANKRD50Q9ULJ7 1429 aa21.84■■□□□ 1.09
CPSF7-202ENST00000394888 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
CPSF7-202ENST00000394888 ABCC2Q92887 1545 aa21.83■■□□□ 1.09
CPSF7-202ENST00000394888 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.08
CPSF7-202ENST00000394888 CNTLNQ9NXG0 1405 aa21.81■■□□□ 1.08
CPSF7-202ENST00000394888 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
CPSF7-202ENST00000394888 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
CPSF7-202ENST00000394888 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
CPSF7-202ENST00000394888 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
CPSF7-202ENST00000394888 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
CPSF7-202ENST00000394888 CCDC7Q96M83 1385 aa21.79■■□□□ 1.08
CPSF7-202ENST00000394888 E9PCH4 1651 aa21.77■■□□□ 1.08
CPSF7-202ENST00000394888 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.08
CPSF7-202ENST00000394888 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
CPSF7-202ENST00000394888 FAM135AQ9P2D6 1515 aa21.75■■□□□ 1.07
CPSF7-202ENST00000394888 IQGAP3Q86VI3 1631 aa21.74■■□□□ 1.07
CPSF7-202ENST00000394888 MAGI2Q86UL8 1455 aa21.73■■□□□ 1.07
CPSF7-202ENST00000394888 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
CPSF7-202ENST00000394888 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
CPSF7-202ENST00000394888 CCDC184Q52MB2 194 aa21.72■■□□□ 1.07
CPSF7-202ENST00000394888 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
CPSF7-202ENST00000394888 RALGAPBQ86X10 1494 aa21.71■■□□□ 1.07
CPSF7-202ENST00000394888 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
CPSF7-202ENST00000394888 EIF4G2P78344 907 aaKnown RBP eCLIP21.7■■□□□ 1.07
CPSF7-202ENST00000394888 ANP32CO43423 234 aa21.7■■□□□ 1.06
CPSF7-202ENST00000394888 KIF15Q9NS87 1388 aa21.69■■□□□ 1.06
CPSF7-202ENST00000394888 KIF7Q2M1P5 1343 aa21.68■■□□□ 1.06
CPSF7-202ENST00000394888 HNRNPMP52272 730 aaKnown RBP eCLIP21.68■■□□□ 1.06
CPSF7-202ENST00000394888 DHX29Q7Z478 1369 aaKnown RBP21.68■■□□□ 1.06
CPSF7-202ENST00000394888 UHRF1BP1LA0JNW5 1464 aa21.68■■□□□ 1.06
CPSF7-202ENST00000394888 PKD2Q13563 968 aa21.67■■□□□ 1.06
CPSF7-202ENST00000394888 ABCC1P33527 1531 aa21.66■■□□□ 1.06
CPSF7-202ENST00000394888 ARHGAP5Q13017 1502 aa21.64■■□□□ 1.06
CPSF7-202ENST00000394888 NUP155O75694 1391 aa21.62■■□□□ 1.05
CPSF7-202ENST00000394888 LAMC1P11047 1609 aa21.6■■□□□ 1.05
CPSF7-202ENST00000394888 DEPDC5O75140 1603 aa21.59■■□□□ 1.05
CPSF7-202ENST00000394888 PRKRIP1Q9H875 184 aaPredicted RBP21.58■■□□□ 1.04
CPSF7-202ENST00000394888 USP47Q96K76 1375 aa21.57■■□□□ 1.04
CPSF7-202ENST00000394888 ABCA9Q8IUA7 1624 aa21.57■■□□□ 1.04
CPSF7-202ENST00000394888 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
CPSF7-202ENST00000394888 PLCH2O75038 1416 aa21.55■■□□□ 1.04
CPSF7-202ENST00000394888 ATP10AO60312 1499 aa21.54■■□□□ 1.04
CPSF7-202ENST00000394888 PLEKHH2Q8IVE3 1493 aa21.54■■□□□ 1.04
CPSF7-202ENST00000394888 DUOX2Q9NRD8 1548 aa21.54■■□□□ 1.04
CPSF7-202ENST00000394888 A2MP01023 1474 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms