RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 EFCAB2Q5VUJ9 269 aa29.34■■■□□ 2.29
CTTN-204ENST00000393747 BCORL1Q5H9F3 1711 aa29.34■■■□□ 2.29
CTTN-204ENST00000393747 CCDC18Q5T9S5 1454 aa29.34■■■□□ 2.29
CTTN-204ENST00000393747 ARID4BQ4LE39 1312 aaPredicted RBP29.33■■■□□ 2.29
CTTN-204ENST00000393747 ZFYVE16Q7Z3T8 1539 aa29.33■■■□□ 2.29
CTTN-204ENST00000393747 MYO5CQ9NQX4 1742 aa29.32■■■□□ 2.28
CTTN-204ENST00000393747 MAGI2Q86UL8 1455 aa29.32■■■□□ 2.28
CTTN-204ENST00000393747 FYCO1Q9BQS8 1478 aa29.31■■■□□ 2.28
CTTN-204ENST00000393747 SIGLEC1Q9BZZ2 1709 aa29.28■■■□□ 2.28
CTTN-204ENST00000393747 MADDQ8WXG6 1647 aa29.28■■■□□ 2.28
CTTN-204ENST00000393747 ARHGAP5Q13017 1502 aa29.28■■■□□ 2.28
CTTN-204ENST00000393747 ZNF518AQ6AHZ1 1483 aa29.2■■■□□ 2.27
CTTN-204ENST00000393747 AFAP1Q8N556 730 aa29.2■■■□□ 2.26
CTTN-204ENST00000393747 KDM5CP41229 1560 aa29.19■■■□□ 2.26
CTTN-204ENST00000393747 CDC42BPBQ9Y5S2 1711 aa29.18■■■□□ 2.26
CTTN-204ENST00000393747 PREX2Q70Z35 1606 aa29.18■■■□□ 2.26
CTTN-204ENST00000393747 ARHGEF12Q9NZN5 1544 aa29.17■■■□□ 2.26
CTTN-204ENST00000393747 ATP10AO60312 1499 aa29.17■■■□□ 2.26
CTTN-204ENST00000393747 C9orf84Q5VXU9 1444 aa29.14■■■□□ 2.26
CTTN-204ENST00000393747 ABCC1P33527 1531 aa29.14■■■□□ 2.26
CTTN-204ENST00000393747 RIMS1Q86UR5 1692 aaKnown RBP29.13■■■□□ 2.25
CTTN-204ENST00000393747 TRAPPC8Q9Y2L5 1435 aa29.13■■■□□ 2.25
CTTN-204ENST00000393747 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
CTTN-204ENST00000393747 MLECQ14165 292 aa29.1■■■□□ 2.25
CTTN-204ENST00000393747 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
CTTN-204ENST00000393747 GPATCH8Q9UKJ3 1502 aaKnown RBP29.08■■■□□ 2.25
CTTN-204ENST00000393747 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
CTTN-204ENST00000393747 DIP2CQ9Y2E4 1556 aa29.06■■■□□ 2.24
CTTN-204ENST00000393747 LMTK3Q96Q04 1460 aa29.06■■■□□ 2.24
CTTN-204ENST00000393747 ITSN2Q9NZM3 1697 aa29.03■■■□□ 2.24
CTTN-204ENST00000393747 ABCA6Q8N139 1617 aa29.02■■■□□ 2.24
CTTN-204ENST00000393747 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.23
CTTN-204ENST00000393747 REREQ9P2R6 1566 aa29■■■□□ 2.23
CTTN-204ENST00000393747 MTUS2Q5JR59 1369 aa28.99■■■□□ 2.23
CTTN-204ENST00000393747 PLPPR3Q6T4P5 718 aa28.98■■■□□ 2.23
CTTN-204ENST00000393747 FER1L4A9Z1Z3 1794 aa28.98■■■□□ 2.23
CTTN-204ENST00000393747 MYT1LQ9UL68 1186 aa28.97■■■□□ 2.23
CTTN-204ENST00000393747 ZNF777Q9ULD5 760 aaPredicted RBP28.97■■■□□ 2.23
CTTN-204ENST00000393747 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
CTTN-204ENST00000393747 CCNB3Q8WWL7 1395 aa28.95■■■□□ 2.22
CTTN-204ENST00000393747 ILDR1Q86SU0 546 aaPredicted RBP28.94■■■□□ 2.22
CTTN-204ENST00000393747 KIDINS220Q9ULH0 1771 aa28.93■■■□□ 2.22
CTTN-204ENST00000393747 CFDP1Q9UEE9 299 aaPredicted RBP28.93■■■□□ 2.22
CTTN-204ENST00000393747 AGLP35573 1532 aa28.92■■■□□ 2.22
CTTN-204ENST00000393747 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
CTTN-204ENST00000393747 HNRNPMP52272 730 aaKnown RBP eCLIP28.92■■■□□ 2.225e-8■■■■■ 27.1
CTTN-204ENST00000393747 KIAA1107Q9UPP5 1409 aa28.91■■■□□ 2.22
CTTN-204ENST00000393747 EHBP1L1Q8N3D4 1523 aa28.91■■■□□ 2.22
CTTN-204ENST00000393747 CEBPAP49715 358 aaPredicted RBP28.89■■■□□ 2.21
CTTN-204ENST00000393747 HSPA2P54652 639 aa28.89■■■□□ 2.21
CTTN-204ENST00000393747 TIAM1Q13009 1591 aa28.88■■■□□ 2.21
CTTN-204ENST00000393747 PLEKHH2Q8IVE3 1493 aa28.85■■■□□ 2.21
CTTN-204ENST00000393747 SPAG9O60271 1321 aaKnown RBP28.84■■■□□ 2.21
CTTN-204ENST00000393747 ZNF644Q9H582 1327 aaPredicted RBP28.84■■■□□ 2.21
CTTN-204ENST00000393747 INO80Q9ULG1 1556 aaPredicted RBP28.8■■■□□ 2.2
CTTN-204ENST00000393747 MBD5Q9P267 1494 aa28.8■■■□□ 2.2
CTTN-204ENST00000393747 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
CTTN-204ENST00000393747 VPS8Q8N3P4 1428 aa28.79■■■□□ 2.2
CTTN-204ENST00000393747 NCOA2Q15596 1464 aa28.76■■■□□ 2.2
CTTN-204ENST00000393747 PLXNC1O60486 1568 aa28.74■■■□□ 2.19
CTTN-204ENST00000393747 A2MP01023 1474 aa28.71■■■□□ 2.19
CTTN-204ENST00000393747 PREX1Q8TCU6 1659 aa28.71■■■□□ 2.19
CTTN-204ENST00000393747 C3P01024 1663 aa28.69■■■□□ 2.18
CTTN-204ENST00000393747 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
CTTN-204ENST00000393747 SUPT6HQ7KZ85 1726 aaKnown RBP28.68■■■□□ 2.18
CTTN-204ENST00000393747 UHRF1BP1Q6BDS2 1440 aa28.67■■■□□ 2.18
CTTN-204ENST00000393747 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
CTTN-204ENST00000393747 ESF1Q9H501 851 aaKnown RBP28.66■■■□□ 2.18
CTTN-204ENST00000393747 CAMSAP2Q08AD1 1489 aa28.66■■■□□ 2.18
CTTN-204ENST00000393747 RTEL1-TNFRSF6BF6WH68 1400 aa28.64■■■□□ 2.17
CTTN-204ENST00000393747 KANK4Q5T7N3 995 aaPredicted RBP28.62■■■□□ 2.17
CTTN-204ENST00000393747 CCDC141Q6ZP82 1450 aa28.61■■■□□ 2.17
CTTN-204ENST00000393747 ZMYM3Q14202 1370 aa28.6■■■□□ 2.17
CTTN-204ENST00000393747 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
CTTN-204ENST00000393747 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
CTTN-204ENST00000393747 SETD1BQ9UPS6 1966 aaKnown RBP28.58■■■□□ 2.17
CTTN-204ENST00000393747 MROH2AA6NES4 1674 aa28.57■■■□□ 2.16
CTTN-204ENST00000393747 ADGBQ8N7X0 1667 aa28.57■■■□□ 2.16
CTTN-204ENST00000393747 GGT6Q6P531 493 aa28.56■■■□□ 2.16
CTTN-204ENST00000393747 NPATQ14207 1427 aa28.56■■■□□ 2.16
CTTN-204ENST00000393747 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
CTTN-204ENST00000393747 STRCQ7RTU9 1775 aa28.53■■■□□ 2.16
CTTN-204ENST00000393747 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
CTTN-204ENST00000393747 ARHGEF5Q12774 1597 aa28.51■■■□□ 2.15
CTTN-204ENST00000393747 CLTCQ00610 1675 aaKnown RBP28.51■■■□□ 2.15
CTTN-204ENST00000393747 PTPRKQ15262 1439 aa28.49■■■□□ 2.15
CTTN-204ENST00000393747 PPP6R1Q9UPN7 881 aa28.48■■■□□ 2.15
CTTN-204ENST00000393747 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
CTTN-204ENST00000393747 NCOA1Q15788 1441 aa28.45■■■□□ 2.14
CTTN-204ENST00000393747 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
CTTN-204ENST00000393747 KIF3BO15066 747 aa28.43■■■□□ 2.14
CTTN-204ENST00000393747 CERKQ8TCT0 537 aa28.42■■■□□ 2.14
CTTN-204ENST00000393747 DMRT2Q9Y5R5 561 aa28.42■■■□□ 2.14
CTTN-204ENST00000393747 TSPY4P0CV99 314 aa28.41■■■□□ 2.14
CTTN-204ENST00000393747 TSPY10P0CW01 314 aa28.41■■■□□ 2.14
CTTN-204ENST00000393747 PTPRTO14522 1441 aa28.4■■■□□ 2.14
CTTN-204ENST00000393747 MYO3AQ8NEV4 1616 aa28.38■■■□□ 2.13
CTTN-204ENST00000393747 MAST1Q9Y2H9 1570 aa28.38■■■□□ 2.13
CTTN-204ENST00000393747 CAMSAP1Q5T5Y3 1602 aa28.37■■■□□ 2.13
CTTN-204ENST00000393747 KDM5DQ9BY66 1539 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms