RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 MS4A1P11836 297 aa12.23□□□□□ -0.45
TMCC1-201ENST00000393238 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.23□□□□□ -0.45
TMCC1-201ENST00000393238 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
TMCC1-201ENST00000393238 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
TMCC1-201ENST00000393238 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
TMCC1-201ENST00000393238 TERF2IPQ9NYB0 399 aa12.22□□□□□ -0.45
TMCC1-201ENST00000393238 SAFB2Q14151 953 aaKnown RBP eCLIP12.22□□□□□ -0.45
TMCC1-201ENST00000393238 NGDNQ8NEJ9 315 aaKnown RBP12.21□□□□□ -0.45
TMCC1-201ENST00000393238 GOLGA2Q08379 1002 aa12.21□□□□□ -0.46
TMCC1-201ENST00000393238 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
TMCC1-201ENST00000393238 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
TMCC1-201ENST00000393238 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.463e-9■□□□□ 11.3
TMCC1-201ENST00000393238 LAS1LQ9Y4W2 734 aaKnown RBP12.19□□□□□ -0.46
TMCC1-201ENST00000393238 SOX12O15370 315 aa12.18□□□□□ -0.46
TMCC1-201ENST00000393238 CALD1Q05682 793 aaKnown RBP12.18□□□□□ -0.46
TMCC1-201ENST00000393238 MEX3CQ5U5Q3 659 aaKnown RBP12.18□□□□□ -0.46
TMCC1-201ENST00000393238 FTSJ3Q8IY81 847 aaKnown RBP12.18□□□□□ -0.46
TMCC1-201ENST00000393238 CASC1Q6TDU7 716 aa12.17□□□□□ -0.46
TMCC1-201ENST00000393238 RAD54L2Q9Y4B4 1467 aa12.17□□□□□ -0.46
TMCC1-201ENST00000393238 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
TMCC1-201ENST00000393238 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
TMCC1-201ENST00000393238 CFTRP13569 1480 aa12.16□□□□□ -0.46
TMCC1-201ENST00000393238 ROCK2O75116 1388 aaKnown RBP12.15□□□□□ -0.46
TMCC1-201ENST00000393238 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
TMCC1-201ENST00000393238 ANP32BQ92688 251 aaKnown RBP12.14□□□□□ -0.47
TMCC1-201ENST00000393238 POGZQ7Z3K3 1410 aa12.14□□□□□ -0.47
TMCC1-201ENST00000393238 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
TMCC1-201ENST00000393238 IGF1RP08069 1367 aa12.13□□□□□ -0.47
TMCC1-201ENST00000393238 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
TMCC1-201ENST00000393238 CDK11BP21127 795 aaKnown RBP12.13□□□□□ -0.47
TMCC1-201ENST00000393238 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
TMCC1-201ENST00000393238 FOXD1Q16676 465 aa12.12□□□□□ -0.47
TMCC1-201ENST00000393238 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
TMCC1-201ENST00000393238 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
TMCC1-201ENST00000393238 CC2D1BQ5T0F9 858 aaKnown RBP12.12□□□□□ -0.47
TMCC1-201ENST00000393238 ATF3P18847 181 aa12.11□□□□□ -0.47
TMCC1-201ENST00000393238 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
TMCC1-201ENST00000393238 EVA1CP58658 441 aa12.11□□□□□ -0.47
TMCC1-201ENST00000393238 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
TMCC1-201ENST00000393238 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
TMCC1-201ENST00000393238 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
TMCC1-201ENST00000393238 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
TMCC1-201ENST00000393238 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
TMCC1-201ENST00000393238 AMPHP49418 695 aa12.09□□□□□ -0.47
TMCC1-201ENST00000393238 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
TMCC1-201ENST00000393238 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
TMCC1-201ENST00000393238 LAMC3Q9Y6N6 1575 aa12.07□□□□□ -0.48
TMCC1-201ENST00000393238 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
TMCC1-201ENST00000393238 FKBP8Q14318 412 aa12.05□□□□□ -0.48
TMCC1-201ENST00000393238 NESP48681 1621 aa12.05□□□□□ -0.48
TMCC1-201ENST00000393238 PLEKHH2Q8IVE3 1493 aa12.05□□□□□ -0.48
TMCC1-201ENST00000393238 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
TMCC1-201ENST00000393238 EVC2Q86UK5 1308 aa12.04□□□□□ -0.48
TMCC1-201ENST00000393238 TOPBP1Q92547 1522 aa12.04□□□□□ -0.48
TMCC1-201ENST00000393238 THEMISQ8N1K5 641 aaPredicted RBP12.04□□□□□ -0.48
TMCC1-201ENST00000393238 GTF3C3Q9Y5Q9 886 aa12.03□□□□□ -0.48
TMCC1-201ENST00000393238 CUX1P39880 1505 aa12.03□□□□□ -0.48
TMCC1-201ENST00000393238 SNAPC4Q5SXM2 1469 aa12.03□□□□□ -0.48
TMCC1-201ENST00000393238 G3V3G9 751 aa12.02□□□□□ -0.48
TMCC1-201ENST00000393238 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.48
TMCC1-201ENST00000393238 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
TMCC1-201ENST00000393238 PSME1Q06323 249 aa12.02□□□□□ -0.49
TMCC1-201ENST00000393238 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
TMCC1-201ENST00000393238 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
TMCC1-201ENST00000393238 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
TMCC1-201ENST00000393238 RALBP1Q15311 655 aa12.01□□□□□ -0.49
TMCC1-201ENST00000393238 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
TMCC1-201ENST00000393238 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
TMCC1-201ENST00000393238 COG3Q96JB2 828 aa12.01□□□□□ -0.49
TMCC1-201ENST00000393238 STK31Q9BXU1 1019 aa12.01□□□□□ -0.49
TMCC1-201ENST00000393238 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
TMCC1-201ENST00000393238 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
TMCC1-201ENST00000393238 RAB3GAP2Q9H2M9 1393 aa12□□□□□ -0.49
TMCC1-201ENST00000393238 PRDM2Q13029 1718 aa12□□□□□ -0.49
TMCC1-201ENST00000393238 TRAK1Q9UPV9 953 aa11.99□□□□□ -0.49
TMCC1-201ENST00000393238 GTF2E1P29083 439 aaPredicted RBP11.99□□□□□ -0.49
TMCC1-201ENST00000393238 PHF23Q9BUL5 403 aaPredicted RBP11.99□□□□□ -0.49
TMCC1-201ENST00000393238 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
TMCC1-201ENST00000393238 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
TMCC1-201ENST00000393238 DHX57Q6P158 1386 aaKnown RBP11.98□□□□□ -0.49
TMCC1-201ENST00000393238 BECN1Q14457 450 aa11.98□□□□□ -0.49
TMCC1-201ENST00000393238 HSPA5P11021 654 aaKnown RBP11.97□□□□□ -0.49
TMCC1-201ENST00000393238 FRAT1Q92837 279 aaPredicted RBP11.97□□□□□ -0.49
TMCC1-201ENST00000393238 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
TMCC1-201ENST00000393238 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
TMCC1-201ENST00000393238 FGD1P98174 961 aa11.96□□□□□ -0.49
TMCC1-201ENST00000393238 POLA1P09884 1462 aaPredicted RBP11.96□□□□□ -0.5
TMCC1-201ENST00000393238 KCNJ4P48050 445 aa11.96□□□□□ -0.5
TMCC1-201ENST00000393238 ZRSR1Q15695 479 aaKnown RBP11.96□□□□□ -0.5
TMCC1-201ENST00000393238 TAF7LQ5H9L4 462 aa11.95□□□□□ -0.5
TMCC1-201ENST00000393238 PROSER2Q86WR7 435 aaPredicted RBP11.95□□□□□ -0.5
TMCC1-201ENST00000393238 WASHC2AQ641Q2 1341 aa11.95□□□□□ -0.5
TMCC1-201ENST00000393238 ANKLE2Q86XL3 938 aa11.95□□□□□ -0.5
TMCC1-201ENST00000393238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■□□□ 13.9
TMCC1-201ENST00000393238 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
TMCC1-201ENST00000393238 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
TMCC1-201ENST00000393238 MSH5O43196 834 aa11.94□□□□□ -0.5
TMCC1-201ENST00000393238 TXNDC2Q86VQ3 553 aa11.94□□□□□ -0.5
TMCC1-201ENST00000393238 LTV1Q96GA3 475 aaPredicted RBP11.94□□□□□ -0.5
TMCC1-201ENST00000393238 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms