RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
CALD1-203ENST00000393118 CUL7Q14999 1698 aa14.23□□□□□ -0.13
CALD1-203ENST00000393118 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
CALD1-203ENST00000393118 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
CALD1-203ENST00000393118 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
CALD1-203ENST00000393118 DEKP35659 375 aaKnown RBP14.21□□□□□ -0.13
CALD1-203ENST00000393118 MRC2Q9UBG0 1479 aa14.21□□□□□ -0.13
CALD1-203ENST00000393118 PTPRKQ15262 1439 aa14.21□□□□□ -0.13
CALD1-203ENST00000393118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.2□□□□□ -0.14
CALD1-203ENST00000393118 WASHC2AQ641Q2 1341 aa14.19□□□□□ -0.14
CALD1-203ENST00000393118 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
CALD1-203ENST00000393118 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
CALD1-203ENST00000393118 EPRSP07814 1512 aaKnown RBP14.18□□□□□ -0.14
CALD1-203ENST00000393118 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
CALD1-203ENST00000393118 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
CALD1-203ENST00000393118 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
CALD1-203ENST00000393118 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
CALD1-203ENST00000393118 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
CALD1-203ENST00000393118 ANO8Q9HCE9 1232 aaPredicted RBP14.15□□□□□ -0.14
CALD1-203ENST00000393118 NBPF8Q3BBV2 869 aa14.15□□□□□ -0.14
CALD1-203ENST00000393118 PRKRIP1Q9H875 184 aaPredicted RBP14.15□□□□□ -0.14
CALD1-203ENST00000393118 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
CALD1-203ENST00000393118 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
CALD1-203ENST00000393118 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
CALD1-203ENST00000393118 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
CALD1-203ENST00000393118 PTPRGP23470 1445 aa14.12□□□□□ -0.15
CALD1-203ENST00000393118 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
CALD1-203ENST00000393118 HECW1Q76N89 1606 aa14.11□□□□□ -0.15
CALD1-203ENST00000393118 ST20-MTHFSA0A0A6YYL1 179 aa14.11□□□□□ -0.15
CALD1-203ENST00000393118 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
CALD1-203ENST00000393118 PTPN23Q9H3S7 1636 aa14.1□□□□□ -0.15
CALD1-203ENST00000393118 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
CALD1-203ENST00000393118 CCDC184Q52MB2 194 aa14.09□□□□□ -0.15
CALD1-203ENST00000393118 CCDC7Q96M83 1385 aa14.09□□□□□ -0.15
CALD1-203ENST00000393118 KIAA0586Q9BVV6 1533 aa14.09□□□□□ -0.15
CALD1-203ENST00000393118 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.15
CALD1-203ENST00000393118 NPM2Q86SE8 214 aaKnown RBP14.08□□□□□ -0.15
CALD1-203ENST00000393118 USP47Q96K76 1375 aa14.08□□□□□ -0.16
CALD1-203ENST00000393118 DAPK1P53355 1430 aa14.08□□□□□ -0.16
CALD1-203ENST00000393118 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.16
CALD1-203ENST00000393118 PLB1Q6P1J6 1458 aa14.07□□□□□ -0.16
CALD1-203ENST00000393118 C11orf95C9JLR9 678 aaPredicted RBP14.07□□□□□ -0.16
CALD1-203ENST00000393118 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
CALD1-203ENST00000393118 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
CALD1-203ENST00000393118 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
CALD1-203ENST00000393118 TROQ12816 1431 aaPredicted RBP14.06□□□□□ -0.16
CALD1-203ENST00000393118 DAXXQ9UER7 740 aaPredicted RBP14.05□□□□□ -0.16
CALD1-203ENST00000393118 THOC2Q8NI27 1593 aaKnown RBP14.05□□□□□ -0.16
CALD1-203ENST00000393118 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.16
CALD1-203ENST00000393118 ANP32AP39687 249 aaKnown RBP14.04□□□□□ -0.16
CALD1-203ENST00000393118 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
CALD1-203ENST00000393118 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
CALD1-203ENST00000393118 ABCC5O15440 1437 aa14.04□□□□□ -0.16
CALD1-203ENST00000393118 GRIN2AQ12879 1464 aa14.02□□□□□ -0.16
CALD1-203ENST00000393118 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.16
CALD1-203ENST00000393118 CNTLNQ9NXG0 1405 aa14.02□□□□□ -0.17
CALD1-203ENST00000393118 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.17
CALD1-203ENST00000393118 UGGT2Q9NYU1 1516 aa14.01□□□□□ -0.17
CALD1-203ENST00000393118 TMF1P82094 1093 aa14□□□□□ -0.17
CALD1-203ENST00000393118 ANKRD30BQ9BXX2 1392 aa14□□□□□ -0.17
CALD1-203ENST00000393118 RSPH4AQ5TD94 716 aa13.99□□□□□ -0.17
CALD1-203ENST00000393118 CANXP27824 592 aaKnown RBP13.99□□□□□ -0.17
CALD1-203ENST00000393118 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
CALD1-203ENST00000393118 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
CALD1-203ENST00000393118 ROCK1Q13464 1354 aa13.97□□□□□ -0.17
CALD1-203ENST00000393118 KIF3BO15066 747 aa13.96□□□□□ -0.17
CALD1-203ENST00000393118 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.17
CALD1-203ENST00000393118 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.17
CALD1-203ENST00000393118 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.18
CALD1-203ENST00000393118 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
CALD1-203ENST00000393118 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
CALD1-203ENST00000393118 NUP153P49790 1475 aaKnown RBP13.95□□□□□ -0.18
CALD1-203ENST00000393118 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
CALD1-203ENST00000393118 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
CALD1-203ENST00000393118 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
CALD1-203ENST00000393118 MAGI3Q5TCQ9 1506 aa13.94□□□□□ -0.18
CALD1-203ENST00000393118 TNNT2P45379 298 aaPredicted RBP13.94□□□□□ -0.18
CALD1-203ENST00000393118 SYNJ2O15056 1496 aa13.94□□□□□ -0.18
CALD1-203ENST00000393118 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
CALD1-203ENST00000393118 NUDCQ9Y266 331 aa13.94□□□□□ -0.18
CALD1-203ENST00000393118 NBPF1Q3BBV0 1214 aa13.93□□□□□ -0.18
CALD1-203ENST00000393118 GGT6Q6P531 493 aa13.93□□□□□ -0.18
CALD1-203ENST00000393118 RALBP1Q15311 655 aa13.93□□□□□ -0.18
CALD1-203ENST00000393118 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
CALD1-203ENST00000393118 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
CALD1-203ENST00000393118 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
CALD1-203ENST00000393118 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
CALD1-203ENST00000393118 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
CALD1-203ENST00000393118 PANK3Q9H999 370 aa13.92□□□□□ -0.18
CALD1-203ENST00000393118 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
CALD1-203ENST00000393118 GLIPR1L2Q4G1C9 344 aa13.91□□□□□ -0.18
CALD1-203ENST00000393118 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
CALD1-203ENST00000393118 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
CALD1-203ENST00000393118 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
CALD1-203ENST00000393118 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
CALD1-203ENST00000393118 WDR62O43379 1518 aa13.89□□□□□ -0.19
CALD1-203ENST00000393118 RPRD2Q5VT52 1461 aaKnown RBP13.89□□□□□ -0.19
CALD1-203ENST00000393118 GPATCH8Q9UKJ3 1502 aaKnown RBP13.89□□□□□ -0.19
CALD1-203ENST00000393118 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
CALD1-203ENST00000393118 KANK1Q14678 1352 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms