RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
PSME4-201ENST00000389993 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
PSME4-201ENST00000389993 ZNF644Q9H582 1327 aaPredicted RBP19.09■□□□□ 0.65
PSME4-201ENST00000389993 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.648e-7■■■■□ 20.2
PSME4-201ENST00000389993 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
PSME4-201ENST00000389993 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
PSME4-201ENST00000389993 NESP48681 1621 aa19.07■□□□□ 0.64
PSME4-201ENST00000389993 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
PSME4-201ENST00000389993 EFCAB2Q5VUJ9 269 aa19.05■□□□□ 0.64
PSME4-201ENST00000389993 PRDM2Q13029 1718 aa19.02■□□□□ 0.64
PSME4-201ENST00000389993 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
PSME4-201ENST00000389993 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
PSME4-201ENST00000389993 NUDCQ9Y266 331 aa19■□□□□ 0.63
PSME4-201ENST00000389993 APBB1O00213 710 aa18.99■□□□□ 0.63
PSME4-201ENST00000389993 IGF1RP08069 1367 aa18.99■□□□□ 0.63
PSME4-201ENST00000389993 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
PSME4-201ENST00000389993 EIF5BO60841 1220 aaKnown RBP18.98■□□□□ 0.63
PSME4-201ENST00000389993 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
PSME4-201ENST00000389993 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
PSME4-201ENST00000389993 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
PSME4-201ENST00000389993 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
PSME4-201ENST00000389993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
PSME4-201ENST00000389993 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
PSME4-201ENST00000389993 CCDC18Q5T9S5 1454 aa18.92■□□□□ 0.62
PSME4-201ENST00000389993 U2AF1L5P0DN76 240 aaPredicted RBP18.92■□□□□ 0.62
PSME4-201ENST00000389993 U2AF1Q01081 240 aaKnown RBP eCLIP18.92■□□□□ 0.622e-8■■■□□ 18.8
PSME4-201ENST00000389993 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
PSME4-201ENST00000389993 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
PSME4-201ENST00000389993 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
PSME4-201ENST00000389993 RRP7AQ9Y3A4 280 aaKnown RBP18.91■□□□□ 0.62
PSME4-201ENST00000389993 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
PSME4-201ENST00000389993 NCLP19338 710 aaKnown RBP18.89■□□□□ 0.62
PSME4-201ENST00000389993 PTPRGP23470 1445 aa18.89■□□□□ 0.61
PSME4-201ENST00000389993 LTV1Q96GA3 475 aaPredicted RBP18.88■□□□□ 0.61
PSME4-201ENST00000389993 ANP32BQ92688 251 aaKnown RBP18.87■□□□□ 0.61
PSME4-201ENST00000389993 ZNF330Q9Y3S2 320 aaPredicted RBP18.86■□□□□ 0.61
PSME4-201ENST00000389993 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
PSME4-201ENST00000389993 OS9Q13438 667 aaPredicted RBP18.85■□□□□ 0.61
PSME4-201ENST00000389993 KIF21BO75037 1637 aa18.85■□□□□ 0.61
PSME4-201ENST00000389993 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.61
PSME4-201ENST00000389993 HDGFL2Q7Z4V5 671 aaPredicted RBP18.83■□□□□ 0.6
PSME4-201ENST00000389993 NPHP1O15259 732 aa18.82■□□□□ 0.6
PSME4-201ENST00000389993 PANK3Q9H999 370 aa18.82■□□□□ 0.6
PSME4-201ENST00000389993 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
PSME4-201ENST00000389993 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
PSME4-201ENST00000389993 TULP1O00294 542 aaPredicted RBP18.8■□□□□ 0.6
PSME4-201ENST00000389993 PLIN1O60240 522 aa18.79■□□□□ 0.6
PSME4-201ENST00000389993 TIMELESSQ9UNS1 1208 aa18.79■□□□□ 0.6
PSME4-201ENST00000389993 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.6
PSME4-201ENST00000389993 RCAN3Q9UKA8 241 aa18.77■□□□□ 0.6
PSME4-201ENST00000389993 MINK1Q8N4C8 1332 aaPredicted RBP18.77■□□□□ 0.6
PSME4-201ENST00000389993 RTN4Q9NQC3 1192 aaKnown RBP18.77■□□□□ 0.6
PSME4-201ENST00000389993 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.59
PSME4-201ENST00000389993 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
PSME4-201ENST00000389993 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
PSME4-201ENST00000389993 BECN1Q14457 450 aa18.76■□□□□ 0.59
PSME4-201ENST00000389993 NAP1L2Q9ULW6 460 aaPredicted RBP18.76■□□□□ 0.59
PSME4-201ENST00000389993 ELL2O00472 640 aaPredicted RBP18.75■□□□□ 0.59
PSME4-201ENST00000389993 ITPRIPQ8IWB1 547 aa18.75■□□□□ 0.59
PSME4-201ENST00000389993 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
PSME4-201ENST00000389993 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
PSME4-201ENST00000389993 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
PSME4-201ENST00000389993 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
PSME4-201ENST00000389993 FAM69CQ0P6D2 419 aa18.72■□□□□ 0.59
PSME4-201ENST00000389993 DDRGK1Q96HY6 314 aa18.72■□□□□ 0.59
PSME4-201ENST00000389993 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
PSME4-201ENST00000389993 AFAP1Q8N556 730 aa18.71■□□□□ 0.59
PSME4-201ENST00000389993 RBM19Q9Y4C8 960 aaKnown RBP18.7■□□□□ 0.58
PSME4-201ENST00000389993 CUX1P39880 1505 aa18.69■□□□□ 0.58
PSME4-201ENST00000389993 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
PSME4-201ENST00000389993 CASC1Q6TDU7 716 aa18.68■□□□□ 0.58
PSME4-201ENST00000389993 TCERG1O14776 1098 aaKnown RBP18.68■□□□□ 0.58
PSME4-201ENST00000389993 RALBP1Q15311 655 aa18.68■□□□□ 0.58
PSME4-201ENST00000389993 USP47Q96K76 1375 aa18.68■□□□□ 0.58
PSME4-201ENST00000389993 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
PSME4-201ENST00000389993 FGD6Q6ZV73 1430 aa18.67■□□□□ 0.58
PSME4-201ENST00000389993 SLC4A10Q6U841 1118 aa18.67■□□□□ 0.58
PSME4-201ENST00000389993 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
PSME4-201ENST00000389993 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
PSME4-201ENST00000389993 HSP90AB1P08238 724 aaKnown RBP18.65■□□□□ 0.58
PSME4-201ENST00000389993 KCNJ4P48050 445 aa18.65■□□□□ 0.58
PSME4-201ENST00000389993 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
PSME4-201ENST00000389993 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
PSME4-201ENST00000389993 CFTRP13569 1480 aa18.64■□□□□ 0.57
PSME4-201ENST00000389993 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
PSME4-201ENST00000389993 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.57
PSME4-201ENST00000389993 NCOA2Q15596 1464 aa18.63■□□□□ 0.57
PSME4-201ENST00000389993 NUTM2GQ5VZR2 741 aa18.63■□□□□ 0.57
PSME4-201ENST00000389993 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
PSME4-201ENST00000389993 AMPHP49418 695 aa18.62■□□□□ 0.57
PSME4-201ENST00000389993 EIF3AQ14152 1382 aaKnown RBP18.62■□□□□ 0.57
PSME4-201ENST00000389993 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
PSME4-201ENST00000389993 KIF15Q9NS87 1388 aa18.61■□□□□ 0.57
PSME4-201ENST00000389993 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
PSME4-201ENST00000389993 MYOM3Q5VTT5 1437 aa18.6■□□□□ 0.57
PSME4-201ENST00000389993 TERF2IPQ9NYB0 399 aa18.6■□□□□ 0.57
PSME4-201ENST00000389993 PRKRIP1Q9H875 184 aaPredicted RBP18.59■□□□□ 0.57
PSME4-201ENST00000389993 FOXD4L1Q9NU39 408 aa18.59■□□□□ 0.57
PSME4-201ENST00000389993 FGD1P98174 961 aa18.59■□□□□ 0.57
PSME4-201ENST00000389993 GOLGA2Q08379 1002 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms