RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 FHOD3Q2V2M9 1422 aa14.32□□□□□ -0.12
LAMA4-205ENST00000389463 KANK4Q5T7N3 995 aaPredicted RBP14.32□□□□□ -0.12
LAMA4-205ENST00000389463 PTPRGP23470 1445 aa14.31□□□□□ -0.12
LAMA4-205ENST00000389463 NBR1Q14596 966 aa14.3□□□□□ -0.12
LAMA4-205ENST00000389463 CSB-PGBD3P0DP91 1061 aa14.3□□□□□ -0.12
LAMA4-205ENST00000389463 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
LAMA4-205ENST00000389463 TIMELESSQ9UNS1 1208 aa14.29□□□□□ -0.12
LAMA4-205ENST00000389463 FOXD1Q16676 465 aa14.29□□□□□ -0.12
LAMA4-205ENST00000389463 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
LAMA4-205ENST00000389463 RTF1Q92541 710 aaKnown RBP14.28□□□□□ -0.12
LAMA4-205ENST00000389463 MPHOSPH9Q99550 1183 aa14.27□□□□□ -0.12
LAMA4-205ENST00000389463 OS9Q13438 667 aaPredicted RBP14.27□□□□□ -0.12
LAMA4-205ENST00000389463 MS4A1P11836 297 aa14.26□□□□□ -0.13
LAMA4-205ENST00000389463 ROCK2O75116 1388 aaKnown RBP14.26□□□□□ -0.13
LAMA4-205ENST00000389463 FRAT1Q92837 279 aaPredicted RBP14.25□□□□□ -0.13
LAMA4-205ENST00000389463 CCDC9Q9Y3X0 531 aaKnown RBP14.25□□□□□ -0.13
LAMA4-205ENST00000389463 GOLGA2Q08379 1002 aa14.25□□□□□ -0.13
LAMA4-205ENST00000389463 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
LAMA4-205ENST00000389463 CDK11BP21127 795 aaKnown RBP14.23□□□□□ -0.13
LAMA4-205ENST00000389463 NUTM2DQ5VT03 806 aaPredicted RBP14.22□□□□□ -0.13
LAMA4-205ENST00000389463 GAPVD1Q14C86 1478 aa14.21□□□□□ -0.13
LAMA4-205ENST00000389463 BECN1Q14457 450 aa14.21□□□□□ -0.13
LAMA4-205ENST00000389463 AEBP2Q6ZN18 517 aaPredicted RBP14.2□□□□□ -0.14
LAMA4-205ENST00000389463 HSPA5P11021 654 aaKnown RBP14.2□□□□□ -0.14
LAMA4-205ENST00000389463 NCLP19338 710 aaKnown RBP14.2□□□□□ -0.14
LAMA4-205ENST00000389463 NGDNQ8NEJ9 315 aaKnown RBP14.2□□□□□ -0.14
LAMA4-205ENST00000389463 FAM69CQ0P6D2 419 aa14.18□□□□□ -0.14
LAMA4-205ENST00000389463 TERF2IPQ9NYB0 399 aa14.18□□□□□ -0.14
LAMA4-205ENST00000389463 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
LAMA4-205ENST00000389463 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
LAMA4-205ENST00000389463 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
LAMA4-205ENST00000389463 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
LAMA4-205ENST00000389463 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
LAMA4-205ENST00000389463 ZNF330Q9Y3S2 320 aaPredicted RBP14.14□□□□□ -0.15
LAMA4-205ENST00000389463 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
LAMA4-205ENST00000389463 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
LAMA4-205ENST00000389463 U2AF1L5P0DN76 240 aaPredicted RBP14.13□□□□□ -0.15
LAMA4-205ENST00000389463 U2AF1Q01081 240 aaKnown RBP eCLIP14.13□□□□□ -0.15
LAMA4-205ENST00000389463 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
LAMA4-205ENST00000389463 KCNJ4P48050 445 aa14.12□□□□□ -0.15
LAMA4-205ENST00000389463 GOLGA6L22H0YM25 854 aa14.11□□□□□ -0.15
LAMA4-205ENST00000389463 FGD1P98174 961 aa14.11□□□□□ -0.15
LAMA4-205ENST00000389463 UACAQ9BZF9 1416 aa14.11□□□□□ -0.15
LAMA4-205ENST00000389463 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
LAMA4-205ENST00000389463 TMX4Q9H1E5 349 aaPredicted RBP14.11□□□□□ -0.15
LAMA4-205ENST00000389463 ZRSR1Q15695 479 aaKnown RBP14.1□□□□□ -0.15
LAMA4-205ENST00000389463 CHMP4AQ9BY43 222 aa14.1□□□□□ -0.15
LAMA4-205ENST00000389463 AMPHP49418 695 aa14.1□□□□□ -0.15
LAMA4-205ENST00000389463 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
LAMA4-205ENST00000389463 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
LAMA4-205ENST00000389463 TRAK1Q9UPV9 953 aa14.09□□□□□ -0.15
LAMA4-205ENST00000389463 CCDC144AA2RUR9 1427 aa14.08□□□□□ -0.16
LAMA4-205ENST00000389463 RGS3P49796 1198 aa14.07□□□□□ -0.16
LAMA4-205ENST00000389463 RALBP1Q15311 655 aa14.07□□□□□ -0.16
LAMA4-205ENST00000389463 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
LAMA4-205ENST00000389463 TAOK2Q9UL54 1235 aa14.07□□□□□ -0.16
LAMA4-205ENST00000389463 IPO8O15397 1037 aaKnown RBP14.06□□□□□ -0.16
LAMA4-205ENST00000389463 TULP1O00294 542 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-205ENST00000389463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
LAMA4-205ENST00000389463 NAP1L2Q9ULW6 460 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-205ENST00000389463 L3MBTL2Q969R5 705 aa14.05□□□□□ -0.16
LAMA4-205ENST00000389463 LTV1Q96GA3 475 aaPredicted RBP14.05□□□□□ -0.16
LAMA4-205ENST00000389463 IGF1RP08069 1367 aa14.05□□□□□ -0.16
LAMA4-205ENST00000389463 RUSC2Q8N2Y8 1516 aa14.04□□□□□ -0.16
LAMA4-205ENST00000389463 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
LAMA4-205ENST00000389463 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
LAMA4-205ENST00000389463 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
LAMA4-205ENST00000389463 EVA1CP58658 441 aa14.02□□□□□ -0.17
LAMA4-205ENST00000389463 CCER2I3L3R5 266 aa14.02□□□□□ -0.17
LAMA4-205ENST00000389463 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.17
LAMA4-205ENST00000389463 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
LAMA4-205ENST00000389463 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
LAMA4-205ENST00000389463 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
LAMA4-205ENST00000389463 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
LAMA4-205ENST00000389463 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
LAMA4-205ENST00000389463 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
LAMA4-205ENST00000389463 MEX3CQ5U5Q3 659 aaKnown RBP13.99□□□□□ -0.17
LAMA4-205ENST00000389463 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
LAMA4-205ENST00000389463 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
LAMA4-205ENST00000389463 MCCP23508 829 aa13.98□□□□□ -0.17
LAMA4-205ENST00000389463 TAF7LQ5H9L4 462 aa13.98□□□□□ -0.17
LAMA4-205ENST00000389463 COG3Q96JB2 828 aa13.98□□□□□ -0.17
LAMA4-205ENST00000389463 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
LAMA4-205ENST00000389463 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
LAMA4-205ENST00000389463 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
LAMA4-205ENST00000389463 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
LAMA4-205ENST00000389463 MYOM3Q5VTT5 1437 aa13.97□□□□□ -0.17
LAMA4-205ENST00000389463 G3V3G9 751 aa13.96□□□□□ -0.17
LAMA4-205ENST00000389463 APBB1O00213 710 aa13.96□□□□□ -0.17
LAMA4-205ENST00000389463 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.17
LAMA4-205ENST00000389463 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
LAMA4-205ENST00000389463 IFT140Q96RY7 1462 aa13.96□□□□□ -0.17
LAMA4-205ENST00000389463 MINK1Q8N4C8 1332 aaPredicted RBP13.96□□□□□ -0.18
LAMA4-205ENST00000389463 GORABQ5T7V8 394 aa13.95□□□□□ -0.18
LAMA4-205ENST00000389463 GTF2E1P29083 439 aaPredicted RBP13.95□□□□□ -0.18
LAMA4-205ENST00000389463 ITPRIPQ8IWB1 547 aa13.95□□□□□ -0.18
LAMA4-205ENST00000389463 PRG4Q92954 1404 aaPredicted RBP13.95□□□□□ -0.18
LAMA4-205ENST00000389463 C1orf141Q5JVX7 400 aa13.94□□□□□ -0.18
LAMA4-205ENST00000389463 NESP48681 1621 aa13.94□□□□□ -0.18
LAMA4-205ENST00000389463 PSME1Q06323 249 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms