RNA–Protein interactions for RNA: ENST00000382120.3

SOD3-201, Transcript of superoxide dismutase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD3, Length 1,526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-201ENST00000382120 LRRC9Q6ZRR7 1453 aa39.24■■■■□ 3.87
SOD3-201ENST00000382120 KANK4Q5T7N3 995 aaPredicted RBP39.22■■■■□ 3.87
SOD3-201ENST00000382120 MAP3K1Q13233 1512 aa39.21■■■■□ 3.87
SOD3-201ENST00000382120 RICTORQ6R327 1708 aa39.21■■■■□ 3.87
SOD3-201ENST00000382120 GPATCH8Q9UKJ3 1502 aaKnown RBP39.21■■■■□ 3.87
SOD3-201ENST00000382120 ADGRL1O94910 1474 aa39.2■■■■□ 3.87
SOD3-201ENST00000382120 EFCAB2Q5VUJ9 269 aa39.19■■■■□ 3.86
SOD3-201ENST00000382120 SUPT6HQ7KZ85 1726 aaKnown RBP39.19■■■■□ 3.86
SOD3-201ENST00000382120 DENND4BO75064 1496 aaPredicted RBP39.16■■■■□ 3.86
SOD3-201ENST00000382120 NCOA2Q15596 1464 aa39.15■■■■□ 3.86
SOD3-201ENST00000382120 CCNB3Q8WWL7 1395 aa39.14■■■■□ 3.86
SOD3-201ENST00000382120 SCAPERQ9BY12 1400 aa39.14■■■■□ 3.86
SOD3-201ENST00000382120 SAMD9LQ8IVG5 1584 aa39.1■■■■□ 3.85
SOD3-201ENST00000382120 ABCC1P33527 1531 aa39.07■■■■□ 3.85
SOD3-201ENST00000382120 ITSN2Q9NZM3 1697 aa39.07■■■■□ 3.84
SOD3-201ENST00000382120 ARHGEF12Q9NZN5 1544 aa39.06■■■■□ 3.84
SOD3-201ENST00000382120 POGZQ7Z3K3 1410 aa39.06■■■■□ 3.84
SOD3-201ENST00000382120 ZNF777Q9ULD5 760 aaPredicted RBP39.05■■■■□ 3.84
SOD3-201ENST00000382120 APLP2Q06481 763 aa39.04■■■■□ 3.84
SOD3-201ENST00000382120 CFDP1Q9UEE9 299 aaPredicted RBP39.01■■■■□ 3.84
SOD3-201ENST00000382120 ZMYM4Q5VZL5 1548 aa38.99■■■■□ 3.83
SOD3-201ENST00000382120 SYCP2Q9BX26 1530 aa38.97■■■■□ 3.83
SOD3-201ENST00000382120 TRAPPC8Q9Y2L5 1435 aa38.96■■■■□ 3.83
SOD3-201ENST00000382120 ZNF644Q9H582 1327 aaPredicted RBP38.95■■■■□ 3.83
SOD3-201ENST00000382120 AFAP1Q8N556 730 aa38.94■■■■□ 3.82
SOD3-201ENST00000382120 ZNF518AQ6AHZ1 1483 aa38.92■■■■□ 3.82
SOD3-201ENST00000382120 KDM5CP41229 1560 aa38.92■■■■□ 3.82
SOD3-201ENST00000382120 YEATS2Q9ULM3 1422 aa38.91■■■■□ 3.82
SOD3-201ENST00000382120 ARHGEF40Q8TER5 1519 aa38.91■■■■□ 3.82
SOD3-201ENST00000382120 HNRNPMP52272 730 aaKnown RBP eCLIP38.88■■■■□ 3.81
SOD3-201ENST00000382120 ZFYVE16Q7Z3T8 1539 aa38.87■■■■□ 3.81
SOD3-201ENST00000382120 SIGLEC1Q9BZZ2 1709 aa38.83■■■■□ 3.81
SOD3-201ENST00000382120 CAMSAP2Q08AD1 1489 aa38.82■■■■□ 3.81
SOD3-201ENST00000382120 HECW2Q9P2P5 1572 aa38.82■■■■□ 3.81
SOD3-201ENST00000382120 MYOM3Q5VTT5 1437 aa38.81■■■■□ 3.8
SOD3-201ENST00000382120 PLEKHH2Q8IVE3 1493 aa38.8■■■■□ 3.8
SOD3-201ENST00000382120 KIAA1107Q9UPP5 1409 aa38.8■■■■□ 3.8
SOD3-201ENST00000382120 MAGI2Q86UL8 1455 aa38.79■■■■□ 3.8
SOD3-201ENST00000382120 PPARGC1BQ86YN6 1023 aaKnown RBP38.76■■■■□ 3.8
SOD3-201ENST00000382120 MBD5Q9P267 1494 aa38.76■■■■□ 3.8
SOD3-201ENST00000382120 KIDINS220Q9ULH0 1771 aa38.75■■■■□ 3.79
SOD3-201ENST00000382120 KDM4FA0A1W2PPD8 638 aa38.75■■■■□ 3.79
SOD3-201ENST00000382120 ABCA6Q8N139 1617 aa38.74■■■■□ 3.79
SOD3-201ENST00000382120 DIP2CQ9Y2E4 1556 aa38.72■■■■□ 3.79
SOD3-201ENST00000382120 MLH3Q9UHC1 1453 aa38.72■■■■□ 3.79
SOD3-201ENST00000382120 MYT1LQ9UL68 1186 aa38.71■■■■□ 3.79
SOD3-201ENST00000382120 MIA2Q96PC5 1412 aa38.67■■■■□ 3.78
SOD3-201ENST00000382120 INO80Q9ULG1 1556 aaPredicted RBP38.66■■■■□ 3.78
SOD3-201ENST00000382120 ATP10AO60312 1499 aa38.65■■■■□ 3.78
SOD3-201ENST00000382120 PTPN23Q9H3S7 1636 aa38.64■■■■□ 3.78
SOD3-201ENST00000382120 ATP7AQ04656 1500 aa38.63■■■■□ 3.77
SOD3-201ENST00000382120 SPAG9O60271 1321 aaKnown RBP38.62■■■■□ 3.77
SOD3-201ENST00000382120 FGD6Q6ZV73 1430 aa38.61■■■■□ 3.77
SOD3-201ENST00000382120 ARID4BQ4LE39 1312 aaPredicted RBP38.61■■■■□ 3.77
SOD3-201ENST00000382120 C9orf84Q5VXU9 1444 aa38.61■■■■□ 3.77
SOD3-201ENST00000382120 CCDC141Q6ZP82 1450 aa38.6■■■■□ 3.77
SOD3-201ENST00000382120 ARHGEF5Q12774 1597 aa38.6■■■■□ 3.77
SOD3-201ENST00000382120 BCORL1Q5H9F3 1711 aa38.59■■■■□ 3.77
SOD3-201ENST00000382120 ADAMTSL3P82987 1691 aa38.52■■■■□ 3.76
SOD3-201ENST00000382120 TCOF1Q13428 1488 aaKnown RBP38.51■■■■□ 3.76
SOD3-201ENST00000382120 REREQ9P2R6 1566 aa38.5■■■■□ 3.75
SOD3-201ENST00000382120 ADGBQ8N7X0 1667 aa38.47■■■■□ 3.75
SOD3-201ENST00000382120 MADDQ8WXG6 1647 aa38.47■■■■□ 3.75
SOD3-201ENST00000382120 MLECQ14165 292 aa38.46■■■■□ 3.75
SOD3-201ENST00000382120 CROCC2H7BZ55 1655 aa38.45■■■■□ 3.75
SOD3-201ENST00000382120 AEBP2Q6ZN18 517 aaPredicted RBP38.44■■■■□ 3.74
SOD3-201ENST00000382120 RTEL1-TNFRSF6BF6WH68 1400 aa38.44■■■■□ 3.74
SOD3-201ENST00000382120 RSPH4AQ5TD94 716 aa38.42■■■■□ 3.74
SOD3-201ENST00000382120 DNMT1P26358 1616 aaKnown RBP38.41■■■■□ 3.74
SOD3-201ENST00000382120 ABCC5O15440 1437 aa38.4■■■■□ 3.74
SOD3-201ENST00000382120 PLXNC1O60486 1568 aa38.4■■■■□ 3.74
SOD3-201ENST00000382120 MAST1Q9Y2H9 1570 aa38.4■■■■□ 3.74
SOD3-201ENST00000382120 A2MP01023 1474 aa38.38■■■■□ 3.73
SOD3-201ENST00000382120 RIMS1Q86UR5 1692 aaKnown RBP38.37■■■■□ 3.73
SOD3-201ENST00000382120 FAM50AQ14320 339 aaKnown RBP38.37■■■■□ 3.73
SOD3-201ENST00000382120 AGLP35573 1532 aa38.36■■■■□ 3.73
SOD3-201ENST00000382120 DAPK1P53355 1430 aa38.36■■■■□ 3.73
SOD3-201ENST00000382120 TSPY4P0CV99 314 aa38.35■■■■□ 3.73
SOD3-201ENST00000382120 TSPY10P0CW01 314 aa38.35■■■■□ 3.73
SOD3-201ENST00000382120 FER1L4A9Z1Z3 1794 aa38.35■■■■□ 3.73
SOD3-201ENST00000382120 SHANK2Q9UPX8 1470 aa38.27■■■■□ 3.72
SOD3-201ENST00000382120 PTPRMP28827 1452 aa38.26■■■■□ 3.72
SOD3-201ENST00000382120 DHX29Q7Z478 1369 aaKnown RBP38.24■■■■□ 3.71
SOD3-201ENST00000382120 CHIC2Q9UKJ5 165 aa38.22■■■■□ 3.71
SOD3-201ENST00000382120 PTPRKQ15262 1439 aa38.17■■■■□ 3.7
SOD3-201ENST00000382120 PLPPR3Q6T4P5 718 aa38.16■■■■□ 3.7
SOD3-201ENST00000382120 RRP7BPQ9NSQ0 103 aa38.13■■■■□ 3.69
SOD3-201ENST00000382120 RRBP1Q9P2E9 1410 aaKnown RBP38.13■■■■□ 3.69
SOD3-201ENST00000382120 KIF15Q9NS87 1388 aa38.12■■■■□ 3.69
SOD3-201ENST00000382120 GGT6Q6P531 493 aa38.12■■■■□ 3.69
SOD3-201ENST00000382120 KIF3BO15066 747 aa38.1■■■■□ 3.69
SOD3-201ENST00000382120 DUOX2Q9NRD8 1548 aa38.1■■■■□ 3.69
SOD3-201ENST00000382120 ITGAEP38570 1179 aa38.08■■■■□ 3.69
SOD3-201ENST00000382120 CLTCQ00610 1675 aaKnown RBP38.08■■■■□ 3.69
SOD3-201ENST00000382120 ADGRL2O95490 1459 aa38.06■■■■□ 3.68
SOD3-201ENST00000382120 NCOA1Q15788 1441 aa38.06■■■■□ 3.68
SOD3-201ENST00000382120 CEBPAP49715 358 aaPredicted RBP38.05■■■■□ 3.68
SOD3-201ENST00000382120 C3P01024 1663 aa38.04■■■■□ 3.68
SOD3-201ENST00000382120 ANKRD30AQ9BXX3 1397 aa38.04■■■■□ 3.68
SOD3-201ENST00000382120 EIF2AK4Q9P2K8 1649 aaKnown RBP38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms