RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 MAP3K4Q9Y6R4 1608 aa12.13□□□□□ -0.47
FAM49A-201ENST00000381323 PLCH2O75038 1416 aa12.13□□□□□ -0.47
FAM49A-201ENST00000381323 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
FAM49A-201ENST00000381323 HSPA2P54652 639 aa12.11□□□□□ -0.47
FAM49A-201ENST00000381323 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
FAM49A-201ENST00000381323 KIF14Q15058 1648 aa12.1□□□□□ -0.47
FAM49A-201ENST00000381323 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
FAM49A-201ENST00000381323 DMRT2Q9Y5R5 561 aa12.08□□□□□ -0.47
FAM49A-201ENST00000381323 CEP162Q5TB80 1403 aa12.08□□□□□ -0.48
FAM49A-201ENST00000381323 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
FAM49A-201ENST00000381323 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
FAM49A-201ENST00000381323 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
FAM49A-201ENST00000381323 ZNF518AQ6AHZ1 1483 aa12.06□□□□□ -0.48
FAM49A-201ENST00000381323 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
FAM49A-201ENST00000381323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
FAM49A-201ENST00000381323 KIF3BO15066 747 aa12.04□□□□□ -0.48
FAM49A-201ENST00000381323 FAM50AQ14320 339 aaKnown RBP12.04□□□□□ -0.48
FAM49A-201ENST00000381323 ATP10AO60312 1499 aa12.04□□□□□ -0.48
FAM49A-201ENST00000381323 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
FAM49A-201ENST00000381323 YEATS2Q9ULM3 1422 aa12.04□□□□□ -0.48
FAM49A-201ENST00000381323 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
FAM49A-201ENST00000381323 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
FAM49A-201ENST00000381323 C9orf84Q5VXU9 1444 aa12.03□□□□□ -0.48
FAM49A-201ENST00000381323 PTPRMP28827 1452 aa12.02□□□□□ -0.48
FAM49A-201ENST00000381323 BCANQ96GW7 911 aa12.02□□□□□ -0.48
FAM49A-201ENST00000381323 SCAF1Q9H7N4 1312 aaKnown RBP12.02□□□□□ -0.49
FAM49A-201ENST00000381323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
FAM49A-201ENST00000381323 PPRC1Q5VV67 1664 aaKnown RBP12.01□□□□□ -0.49
FAM49A-201ENST00000381323 PLEKHH2Q8IVE3 1493 aa12.01□□□□□ -0.49
FAM49A-201ENST00000381323 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
FAM49A-201ENST00000381323 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
FAM49A-201ENST00000381323 TTC37Q6PGP7 1564 aa11.99□□□□□ -0.49
FAM49A-201ENST00000381323 ITGAEP38570 1179 aa11.99□□□□□ -0.49
FAM49A-201ENST00000381323 PCF11O94913 1555 aaKnown RBP11.98□□□□□ -0.49
FAM49A-201ENST00000381323 UHRF1BP1Q6BDS2 1440 aa11.98□□□□□ -0.49
FAM49A-201ENST00000381323 ZNF644Q9H582 1327 aaPredicted RBP11.97□□□□□ -0.49
FAM49A-201ENST00000381323 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.5
FAM49A-201ENST00000381323 TRAPPC8Q9Y2L5 1435 aa11.95□□□□□ -0.5
FAM49A-201ENST00000381323 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
FAM49A-201ENST00000381323 HECW2Q9P2P5 1572 aa11.94□□□□□ -0.5
FAM49A-201ENST00000381323 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
FAM49A-201ENST00000381323 FBXO41Q8TF61 875 aa11.93□□□□□ -0.5
FAM49A-201ENST00000381323 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
FAM49A-201ENST00000381323 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
FAM49A-201ENST00000381323 PPARGC1BQ86YN6 1023 aaKnown RBP11.92□□□□□ -0.5
FAM49A-201ENST00000381323 RRP7BPQ9NSQ0 103 aa11.91□□□□□ -0.5
FAM49A-201ENST00000381323 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
FAM49A-201ENST00000381323 GPATCH8Q9UKJ3 1502 aaKnown RBP11.9□□□□□ -0.5
FAM49A-201ENST00000381323 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
FAM49A-201ENST00000381323 KANK1Q14678 1352 aa11.9□□□□□ -0.5
FAM49A-201ENST00000381323 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
FAM49A-201ENST00000381323 MADDQ8WXG6 1647 aa11.9□□□□□ -0.51
FAM49A-201ENST00000381323 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
FAM49A-201ENST00000381323 CERKQ8TCT0 537 aa11.89□□□□□ -0.51
FAM49A-201ENST00000381323 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
FAM49A-201ENST00000381323 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
FAM49A-201ENST00000381323 THEMISQ8N1K5 641 aaPredicted RBP11.88□□□□□ -0.51
FAM49A-201ENST00000381323 MLH3Q9UHC1 1453 aa11.88□□□□□ -0.51
FAM49A-201ENST00000381323 A2MP01023 1474 aa11.88□□□□□ -0.51
FAM49A-201ENST00000381323 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
FAM49A-201ENST00000381323 ZMYM3Q14202 1370 aa11.88□□□□□ -0.51
FAM49A-201ENST00000381323 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
FAM49A-201ENST00000381323 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
FAM49A-201ENST00000381323 PPP1R15AO75807 674 aaPredicted RBP11.87□□□□□ -0.51
FAM49A-201ENST00000381323 EID1Q9Y6B2 187 aa11.87□□□□□ -0.51
FAM49A-201ENST00000381323 ANKLE2Q86XL3 938 aa11.86□□□□□ -0.51
FAM49A-201ENST00000381323 ZMYM4Q5VZL5 1548 aa11.85□□□□□ -0.51
FAM49A-201ENST00000381323 UBAP1LF5GYI3 381 aa11.85□□□□□ -0.51
FAM49A-201ENST00000381323 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
FAM49A-201ENST00000381323 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
FAM49A-201ENST00000381323 BCORL1Q5H9F3 1711 aa11.83□□□□□ -0.51
FAM49A-201ENST00000381323 PKD2Q13563 968 aa11.83□□□□□ -0.52
FAM49A-201ENST00000381323 DHX29Q7Z478 1369 aaKnown RBP11.83□□□□□ -0.52
FAM49A-201ENST00000381323 ABCC1P33527 1531 aa11.83□□□□□ -0.52
FAM49A-201ENST00000381323 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
FAM49A-201ENST00000381323 MYOM3Q5VTT5 1437 aa11.82□□□□□ -0.52
FAM49A-201ENST00000381323 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 FRMPD1Q5SYB0 1578 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 FBXO31Q5XUX0 539 aaPredicted RBP11.81□□□□□ -0.52
FAM49A-201ENST00000381323 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 RICTORQ6R327 1708 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
FAM49A-201ENST00000381323 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 TNRQ92752 1358 aa11.81□□□□□ -0.52
FAM49A-201ENST00000381323 LRRC9Q6ZRR7 1453 aa11.8□□□□□ -0.52
FAM49A-201ENST00000381323 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
FAM49A-201ENST00000381323 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
FAM49A-201ENST00000381323 CAMSAP2Q08AD1 1489 aa11.79□□□□□ -0.52
FAM49A-201ENST00000381323 ADAMTSL3P82987 1691 aa11.79□□□□□ -0.52
FAM49A-201ENST00000381323 ARHGEF12Q9NZN5 1544 aa11.78□□□□□ -0.52
FAM49A-201ENST00000381323 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
FAM49A-201ENST00000381323 KIF15Q9NS87 1388 aa11.78□□□□□ -0.52
FAM49A-201ENST00000381323 TOM1O60784 492 aa11.78□□□□□ -0.52
FAM49A-201ENST00000381323 SAMD9LQ8IVG5 1584 aa11.77□□□□□ -0.52
FAM49A-201ENST00000381323 ITSN2Q9NZM3 1697 aa11.77□□□□□ -0.53
FAM49A-201ENST00000381323 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.53
FAM49A-201ENST00000381323 LMTK3Q96Q04 1460 aa11.77□□□□□ -0.53
FAM49A-201ENST00000381323 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.53
FAM49A-201ENST00000381323 TXNDC2Q86VQ3 553 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms