RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
GABPB1-203ENST00000380877 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
GABPB1-203ENST00000380877 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
GABPB1-203ENST00000380877 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
GABPB1-203ENST00000380877 MYOM3Q5VTT5 1437 aa16.29■□□□□ 0.2
GABPB1-203ENST00000380877 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
GABPB1-203ENST00000380877 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
GABPB1-203ENST00000380877 ZNF644Q9H582 1327 aaPredicted RBP16.26■□□□□ 0.19
GABPB1-203ENST00000380877 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
GABPB1-203ENST00000380877 ANP32AP39687 249 aaKnown RBP16.25■□□□□ 0.19
GABPB1-203ENST00000380877 LAMC3Q9Y6N6 1575 aa16.25■□□□□ 0.19
GABPB1-203ENST00000380877 FYCO1Q9BQS8 1478 aa16.24■□□□□ 0.19
GABPB1-203ENST00000380877 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
GABPB1-203ENST00000380877 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
GABPB1-203ENST00000380877 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
GABPB1-203ENST00000380877 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
GABPB1-203ENST00000380877 CYB5RLQ6IPT4 315 aa16.22■□□□□ 0.19
GABPB1-203ENST00000380877 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
GABPB1-203ENST00000380877 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
GABPB1-203ENST00000380877 PPM1GO15355 546 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-203ENST00000380877 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
GABPB1-203ENST00000380877 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
GABPB1-203ENST00000380877 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
GABPB1-203ENST00000380877 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
GABPB1-203ENST00000380877 SAFB2Q14151 953 aaKnown RBP eCLIP16.19■□□□□ 0.18
GABPB1-203ENST00000380877 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
GABPB1-203ENST00000380877 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
GABPB1-203ENST00000380877 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
GABPB1-203ENST00000380877 PRG4Q92954 1404 aaPredicted RBP16.17■□□□□ 0.18
GABPB1-203ENST00000380877 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
GABPB1-203ENST00000380877 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
GABPB1-203ENST00000380877 ZBTB7CA1YPR0 619 aa16.16■□□□□ 0.18
GABPB1-203ENST00000380877 STK26Q9P289 416 aa16.16■□□□□ 0.18
GABPB1-203ENST00000380877 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
GABPB1-203ENST00000380877 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
GABPB1-203ENST00000380877 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
GABPB1-203ENST00000380877 KIF15Q9NS87 1388 aa16.12■□□□□ 0.17
GABPB1-203ENST00000380877 UACAQ9BZF9 1416 aa16.12■□□□□ 0.17
GABPB1-203ENST00000380877 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
GABPB1-203ENST00000380877 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
GABPB1-203ENST00000380877 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
GABPB1-203ENST00000380877 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
GABPB1-203ENST00000380877 KIAA0586Q9BVV6 1533 aa16.09■□□□□ 0.17
GABPB1-203ENST00000380877 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
GABPB1-203ENST00000380877 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
GABPB1-203ENST00000380877 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.17
GABPB1-203ENST00000380877 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.17
GABPB1-203ENST00000380877 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
GABPB1-203ENST00000380877 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.16
GABPB1-203ENST00000380877 EIF3AQ14152 1382 aaKnown RBP16.06■□□□□ 0.16
GABPB1-203ENST00000380877 NUTM2DQ5VT03 806 aaPredicted RBP16.06■□□□□ 0.16
GABPB1-203ENST00000380877 RALBP1Q15311 655 aa16.06■□□□□ 0.16
GABPB1-203ENST00000380877 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
GABPB1-203ENST00000380877 TROQ12816 1431 aaPredicted RBP16.05■□□□□ 0.16
GABPB1-203ENST00000380877 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
GABPB1-203ENST00000380877 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
GABPB1-203ENST00000380877 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
GABPB1-203ENST00000380877 AFAP1Q8N556 730 aa16.02■□□□□ 0.16
GABPB1-203ENST00000380877 CUL7Q14999 1698 aa16.02■□□□□ 0.16
GABPB1-203ENST00000380877 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
GABPB1-203ENST00000380877 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
GABPB1-203ENST00000380877 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
GABPB1-203ENST00000380877 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
GABPB1-203ENST00000380877 USP47Q96K76 1375 aa16■□□□□ 0.15
GABPB1-203ENST00000380877 FAM69CQ0P6D2 419 aa16■□□□□ 0.15
GABPB1-203ENST00000380877 LAS1LQ9Y4W2 734 aaKnown RBP16■□□□□ 0.15
GABPB1-203ENST00000380877 PPP4R2Q9NY27 417 aa16■□□□□ 0.15
GABPB1-203ENST00000380877 TRAK1Q9UPV9 953 aa16■□□□□ 0.15
GABPB1-203ENST00000380877 ARHGAP5Q13017 1502 aa16■□□□□ 0.15
GABPB1-203ENST00000380877 HAP1P54257 671 aaPredicted RBP15.99■□□□□ 0.15
GABPB1-203ENST00000380877 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
GABPB1-203ENST00000380877 SOX12O15370 315 aa15.98■□□□□ 0.15
GABPB1-203ENST00000380877 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
GABPB1-203ENST00000380877 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
GABPB1-203ENST00000380877 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
GABPB1-203ENST00000380877 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
GABPB1-203ENST00000380877 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
GABPB1-203ENST00000380877 GRIN2AQ12879 1464 aa15.96■□□□□ 0.15
GABPB1-203ENST00000380877 HSP90AA1P07900 732 aaKnown RBP15.96■□□□□ 0.15
GABPB1-203ENST00000380877 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
GABPB1-203ENST00000380877 HFM1A2PYH4 1435 aa15.96■□□□□ 0.14
GABPB1-203ENST00000380877 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.14
GABPB1-203ENST00000380877 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
GABPB1-203ENST00000380877 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
GABPB1-203ENST00000380877 A0A0G2JS52 829 aa15.94■□□□□ 0.14
GABPB1-203ENST00000380877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.94■□□□□ 0.143e-6■■□□□ 12.8
GABPB1-203ENST00000380877 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
GABPB1-203ENST00000380877 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
GABPB1-203ENST00000380877 PRKRIP1Q9H875 184 aaPredicted RBP15.92■□□□□ 0.14
GABPB1-203ENST00000380877 TERF2IPQ9NYB0 399 aa15.92■□□□□ 0.14
GABPB1-203ENST00000380877 PANK3Q9H999 370 aa15.92■□□□□ 0.14
GABPB1-203ENST00000380877 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
GABPB1-203ENST00000380877 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
GABPB1-203ENST00000380877 B4GALNT3Q6L9W6 998 aa15.92■□□□□ 0.14
GABPB1-203ENST00000380877 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
GABPB1-203ENST00000380877 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
GABPB1-203ENST00000380877 MAP3K1Q13233 1512 aa15.89■□□□□ 0.13
GABPB1-203ENST00000380877 DAPK1P53355 1430 aa15.89■□□□□ 0.13
GABPB1-203ENST00000380877 PLEKHH2Q8IVE3 1493 aa15.88■□□□□ 0.13
GABPB1-203ENST00000380877 STAC3Q96MF2 364 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms