RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 PLB1Q6P1J6 1458 aa28.36■■■□□ 2.13
EBF1-202ENST00000380654 DNMT1P26358 1616 aaKnown RBP28.36■■■□□ 2.13
EBF1-202ENST00000380654 PRG4Q92954 1404 aaPredicted RBP28.36■■■□□ 2.13
EBF1-202ENST00000380654 CDK11AQ9UQ88 783 aaPredicted RBP28.34■■■□□ 2.13
EBF1-202ENST00000380654 ANP32CO43423 234 aa28.32■■■□□ 2.12
EBF1-202ENST00000380654 ROCK1Q13464 1354 aa28.3■■■□□ 2.12
EBF1-202ENST00000380654 TROQ12816 1431 aaPredicted RBP28.28■■■□□ 2.12
EBF1-202ENST00000380654 CCER2I3L3R5 266 aa28.25■■■□□ 2.11
EBF1-202ENST00000380654 KIF14Q15058 1648 aa28.25■■■□□ 2.11
EBF1-202ENST00000380654 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
EBF1-202ENST00000380654 JPH4Q96JJ6 628 aa28.25■■■□□ 2.11
EBF1-202ENST00000380654 HSPA5P11021 654 aaKnown RBP28.23■■■□□ 2.11
EBF1-202ENST00000380654 NUP160Q12769 1436 aa28.23■■■□□ 2.11
EBF1-202ENST00000380654 CAMSAP2Q08AD1 1489 aa28.22■■■□□ 2.11
EBF1-202ENST00000380654 CFDP1Q9UEE9 299 aaPredicted RBP28.22■■■□□ 2.11
EBF1-202ENST00000380654 GPATCH8Q9UKJ3 1502 aaKnown RBP28.2■■■□□ 2.11
EBF1-202ENST00000380654 CARMIL2Q6F5E8 1435 aa28.2■■■□□ 2.1
EBF1-202ENST00000380654 ANKRD30BQ9BXX2 1392 aa28.2■■■□□ 2.1
EBF1-202ENST00000380654 ZNF777Q9ULD5 760 aaPredicted RBP28.19■■■□□ 2.1
EBF1-202ENST00000380654 ITSN2Q9NZM3 1697 aa28.18■■■□□ 2.1
EBF1-202ENST00000380654 WASHC2AQ641Q2 1341 aa28.17■■■□□ 2.1
EBF1-202ENST00000380654 SLC4A1APQ9BWU0 796 aaKnown RBP28.17■■■□□ 2.1
EBF1-202ENST00000380654 ADCY10Q96PN6 1610 aa28.16■■■□□ 2.1
EBF1-202ENST00000380654 RPRD2Q5VT52 1461 aaKnown RBP28.15■■■□□ 2.1
EBF1-202ENST00000380654 EIF4G2P78344 907 aaKnown RBP eCLIP28.13■■■□□ 2.09
EBF1-202ENST00000380654 NCOA1Q15788 1441 aa28.11■■■□□ 2.09
EBF1-202ENST00000380654 ADGBQ8N7X0 1667 aa28.1■■■□□ 2.09
EBF1-202ENST00000380654 NBPF8Q3BBV2 869 aa28.1■■■□□ 2.09
EBF1-202ENST00000380654 TEX14Q8IWB6 1497 aa28.1■■■□□ 2.09
EBF1-202ENST00000380654 PZPP20742 1482 aa28.09■■■□□ 2.09
EBF1-202ENST00000380654 CROCC2H7BZ55 1655 aa28.08■■■□□ 2.09
EBF1-202ENST00000380654 ABCA8O94911 1581 aa28.07■■■□□ 2.08
EBF1-202ENST00000380654 C11orf95C9JLR9 678 aaPredicted RBP28.04■■■□□ 2.08
EBF1-202ENST00000380654 CDC42BPAQ5VT25 1732 aa28.04■■■□□ 2.08
EBF1-202ENST00000380654 ATP10BO94823 1461 aa28.04■■■□□ 2.08
EBF1-202ENST00000380654 PLEKHD1A6NEE1 506 aa28.03■■■□□ 2.08
EBF1-202ENST00000380654 ADGRL2O95490 1459 aa28.02■■■□□ 2.08
EBF1-202ENST00000380654 FKBP8Q14318 412 aa27.99■■■□□ 2.07
EBF1-202ENST00000380654 BCANQ96GW7 911 aa27.99■■■□□ 2.07
EBF1-202ENST00000380654 ABCC10Q5T3U5 1492 aa27.99■■■□□ 2.07
EBF1-202ENST00000380654 ANKRD30AQ9BXX3 1397 aa27.97■■■□□ 2.07
EBF1-202ENST00000380654 CNTLNQ9NXG0 1405 aa27.95■■■□□ 2.06
EBF1-202ENST00000380654 CCDC7Q96M83 1385 aa27.95■■■□□ 2.06
EBF1-202ENST00000380654 ANKRD50Q9ULJ7 1429 aa27.93■■■□□ 2.06
EBF1-202ENST00000380654 PKD2Q13563 968 aa27.92■■■□□ 2.06
EBF1-202ENST00000380654 KIAA1107Q9UPP5 1409 aa27.92■■■□□ 2.06
EBF1-202ENST00000380654 SPATA31E1Q6ZUB1 1445 aa27.9■■■□□ 2.06
EBF1-202ENST00000380654 C9orf84Q5VXU9 1444 aa27.89■■■□□ 2.06
EBF1-202ENST00000380654 PTPRGP23470 1445 aa27.87■■■□□ 2.05
EBF1-202ENST00000380654 HNRNPUQ00839 825 aaKnown RBP eCLIP27.87■■■□□ 2.05
EBF1-202ENST00000380654 CCDC184Q52MB2 194 aa27.87■■■□□ 2.05
EBF1-202ENST00000380654 HNRNPMP52272 730 aaKnown RBP eCLIP27.85■■■□□ 2.05
EBF1-202ENST00000380654 MBD5Q9P267 1494 aa27.85■■■□□ 2.05
EBF1-202ENST00000380654 SHANK2Q9UPX8 1470 aa27.84■■■□□ 2.05
EBF1-202ENST00000380654 KIF7Q2M1P5 1343 aa27.84■■■□□ 2.05
EBF1-202ENST00000380654 ZNF326Q5BKZ1 582 aaKnown RBP27.84■■■□□ 2.05
EBF1-202ENST00000380654 NUP155O75694 1391 aa27.83■■■□□ 2.04
EBF1-202ENST00000380654 CHD1O14646 1710 aa27.82■■■□□ 2.04
EBF1-202ENST00000380654 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
EBF1-202ENST00000380654 TSPY4P0CV99 314 aa27.8■■■□□ 2.04
EBF1-202ENST00000380654 TSPY10P0CW01 314 aa27.8■■■□□ 2.04
EBF1-202ENST00000380654 PRKRIP1Q9H875 184 aaPredicted RBP27.8■■■□□ 2.04
EBF1-202ENST00000380654 NEFLP07196 543 aa27.8■■■□□ 2.04
EBF1-202ENST00000380654 TSHZ2Q9NRE2 1034 aa27.79■■■□□ 2.04
EBF1-202ENST00000380654 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
EBF1-202ENST00000380654 KIF15Q9NS87 1388 aa27.76■■■□□ 2.04
EBF1-202ENST00000380654 SAMD9LQ8IVG5 1584 aa27.75■■■□□ 2.03
EBF1-202ENST00000380654 ARHGEF5Q12774 1597 aa27.74■■■□□ 2.03
EBF1-202ENST00000380654 BCORL1Q5H9F3 1711 aa27.72■■■□□ 2.03
EBF1-202ENST00000380654 USP47Q96K76 1375 aa27.72■■■□□ 2.03
EBF1-202ENST00000380654 PREX2Q70Z35 1606 aa27.72■■■□□ 2.03
EBF1-202ENST00000380654 KDM5DQ9BY66 1539 aa27.7■■■□□ 2.03
EBF1-202ENST00000380654 FAM9BQ8IZU0 186 aa27.68■■■□□ 2.02
EBF1-202ENST00000380654 MRS2Q9HD23 443 aa27.68■■■□□ 2.02
EBF1-202ENST00000380654 CCDC141Q6ZP82 1450 aa27.67■■■□□ 2.02
EBF1-202ENST00000380654 KDM5CP41229 1560 aa27.67■■■□□ 2.02
EBF1-202ENST00000380654 ERCC6L2Q5T890 1561 aa27.67■■■□□ 2.02
EBF1-202ENST00000380654 POLR3GLQ9BT43 218 aa27.66■■■□□ 2.02
EBF1-202ENST00000380654 TTC37Q6PGP7 1564 aa27.65■■■□□ 2.02
EBF1-202ENST00000380654 SHROOM2Q13796 1616 aa27.65■■■□□ 2.02
EBF1-202ENST00000380654 UHRF1BP1Q6BDS2 1440 aa27.62■■■□□ 2.01
EBF1-202ENST00000380654 SYCP2Q9BX26 1530 aa27.62■■■□□ 2.01
EBF1-202ENST00000380654 CNGB1Q14028 1251 aaPredicted RBP27.62■■■□□ 2.01
EBF1-202ENST00000380654 KDM2AQ9Y2K7 1162 aa27.62■■■□□ 2.01
EBF1-202ENST00000380654 RALGAPBQ86X10 1494 aa27.6■■■□□ 2.01
EBF1-202ENST00000380654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.01
EBF1-202ENST00000380654 ARHGAP5Q13017 1502 aa27.6■■■□□ 2.01
EBF1-202ENST00000380654 DHX29Q7Z478 1369 aaKnown RBP27.59■■■□□ 2.01
EBF1-202ENST00000380654 FAM135AQ9P2D6 1515 aa27.59■■■□□ 2.01
EBF1-202ENST00000380654 IRX6P78412 446 aaPredicted RBP27.58■■■□□ 2.01
EBF1-202ENST00000380654 ARHGEF12Q9NZN5 1544 aa27.58■■■□□ 2.01
EBF1-202ENST00000380654 CARD11Q9BXL7 1154 aa27.57■■■□□ 2
EBF1-202ENST00000380654 DCAF11Q8TEB1 546 aa27.57■■■□□ 2
EBF1-202ENST00000380654 RSPH4AQ5TD94 716 aa27.54■■■□□ 2
EBF1-202ENST00000380654 ABCC2Q92887 1545 aa27.54■■■□□ 2
EBF1-202ENST00000380654 MYO5CQ9NQX4 1742 aa27.51■■□□□ 1.99
EBF1-202ENST00000380654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.5■■□□□ 1.99
EBF1-202ENST00000380654 ST20-MTHFSA0A0A6YYL1 179 aa27.48■■□□□ 1.99
EBF1-202ENST00000380654 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
EBF1-202ENST00000380654 ZBED9Q6R2W3 1325 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms