RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 CUL7Q14999 1698 aa21.66■■□□□ 1.06
BRF1-203ENST00000379937 EFCAB5A4FU69 1503 aa21.66■■□□□ 1.06
BRF1-203ENST00000379937 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
BRF1-203ENST00000379937 KDM6BO15054 1643 aa21.64■■□□□ 1.06
BRF1-203ENST00000379937 UACAQ9BZF9 1416 aa21.64■■□□□ 1.05
BRF1-203ENST00000379937 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
BRF1-203ENST00000379937 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
BRF1-203ENST00000379937 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
BRF1-203ENST00000379937 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
BRF1-203ENST00000379937 PTPRGP23470 1445 aa21.63■■□□□ 1.05
BRF1-203ENST00000379937 NUTM2DQ5VT03 806 aaPredicted RBP21.62■■□□□ 1.05
BRF1-203ENST00000379937 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
BRF1-203ENST00000379937 CTTNBP2Q8WZ74 1663 aa21.62■■□□□ 1.05
BRF1-203ENST00000379937 NUP153P49790 1475 aaKnown RBP21.6■■□□□ 1.05
BRF1-203ENST00000379937 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
BRF1-203ENST00000379937 PTPN23Q9H3S7 1636 aa21.58■■□□□ 1.04
BRF1-203ENST00000379937 DISP1Q96F81 1524 aa21.57■■□□□ 1.04
BRF1-203ENST00000379937 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
BRF1-203ENST00000379937 ABCC5O15440 1437 aa21.57■■□□□ 1.04
BRF1-203ENST00000379937 KIAA0586Q9BVV6 1533 aa21.56■■□□□ 1.04
BRF1-203ENST00000379937 ST20-MTHFSA0A0A6YYL1 179 aa21.55■■□□□ 1.04
BRF1-203ENST00000379937 NBPF1Q3BBV0 1214 aa21.55■■□□□ 1.04
BRF1-203ENST00000379937 LRRIQ1Q96JM4 1722 aa21.54■■□□□ 1.04
BRF1-203ENST00000379937 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
BRF1-203ENST00000379937 CC2D1BQ5T0F9 858 aaKnown RBP21.53■■□□□ 1.04
BRF1-203ENST00000379937 DAPK1P53355 1430 aa21.52■■□□□ 1.04
BRF1-203ENST00000379937 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
BRF1-203ENST00000379937 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
BRF1-203ENST00000379937 SUPT6HQ7KZ85 1726 aaKnown RBP21.5■■□□□ 1.03
BRF1-203ENST00000379937 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
BRF1-203ENST00000379937 EHBP1L1Q8N3D4 1523 aa21.49■■□□□ 1.03
BRF1-203ENST00000379937 PBRM1Q86U86 1689 aa21.48■■□□□ 1.03
BRF1-203ENST00000379937 KIF7Q2M1P5 1343 aa21.47■■□□□ 1.03
BRF1-203ENST00000379937 UGGT2Q9NYU1 1516 aa21.46■■□□□ 1.03
BRF1-203ENST00000379937 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
BRF1-203ENST00000379937 GGT6Q6P531 493 aa21.43■■□□□ 1.02
BRF1-203ENST00000379937 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
BRF1-203ENST00000379937 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
BRF1-203ENST00000379937 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
BRF1-203ENST00000379937 ANKRD30AQ9BXX3 1397 aa21.42■■□□□ 1.02
BRF1-203ENST00000379937 KIF15Q9NS87 1388 aa21.42■■□□□ 1.02
BRF1-203ENST00000379937 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
BRF1-203ENST00000379937 ANKRD50Q9ULJ7 1429 aa21.41■■□□□ 1.02
BRF1-203ENST00000379937 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
BRF1-203ENST00000379937 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
BRF1-203ENST00000379937 TMC1Q8TDI8 760 aa21.41■■□□□ 1.02
BRF1-203ENST00000379937 WDR62O43379 1518 aa21.4■■□□□ 1.02
BRF1-203ENST00000379937 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
BRF1-203ENST00000379937 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.02
BRF1-203ENST00000379937 ATP10BO94823 1461 aa21.39■■□□□ 1.02
BRF1-203ENST00000379937 KIF14Q15058 1648 aa21.39■■□□□ 1.02
BRF1-203ENST00000379937 KIF3BO15066 747 aa21.39■■□□□ 1.01
BRF1-203ENST00000379937 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.01
BRF1-203ENST00000379937 DENND4BO75064 1496 aaPredicted RBP21.39■■□□□ 1.01
BRF1-203ENST00000379937 TIMELESSQ9UNS1 1208 aa21.39■■□□□ 1.01
BRF1-203ENST00000379937 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
BRF1-203ENST00000379937 ANKRD30BQ9BXX2 1392 aa21.37■■□□□ 1.01
BRF1-203ENST00000379937 KIAA0556O60303 1618 aa21.36■■□□□ 1.01
BRF1-203ENST00000379937 NCOA1Q15788 1441 aa21.35■■□□□ 1.01
BRF1-203ENST00000379937 CYB5RLQ6IPT4 315 aa21.34■■□□□ 1.01
BRF1-203ENST00000379937 USP47Q96K76 1375 aa21.33■■□□□ 1.01
BRF1-203ENST00000379937 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1
BRF1-203ENST00000379937 MLECQ14165 292 aa21.31■■□□□ 1
BRF1-203ENST00000379937 C9orf84Q5VXU9 1444 aa21.31■■□□□ 1
BRF1-203ENST00000379937 CCDC7Q96M83 1385 aa21.3■■□□□ 1
BRF1-203ENST00000379937 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
BRF1-203ENST00000379937 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
BRF1-203ENST00000379937 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.28■■□□□ 13e-6■■■■■ 37.9
BRF1-203ENST00000379937 MIA2Q96PC5 1412 aa21.28■■□□□ 1
BRF1-203ENST00000379937 RAPGEF6Q8TEU7 1601 aa21.27■■□□□ 1
BRF1-203ENST00000379937 NPM1P06748 294 aaKnown RBP eCLIP21.27■■□□□ 1
BRF1-203ENST00000379937 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
BRF1-203ENST00000379937 EFCAB2Q5VUJ9 269 aa21.25■□□□□ 0.99
BRF1-203ENST00000379937 RAPGEF3O95398 923 aa21.24■□□□□ 0.99
BRF1-203ENST00000379937 CCER2I3L3R5 266 aa21.24■□□□□ 0.99
BRF1-203ENST00000379937 SPAG9O60271 1321 aaKnown RBP21.23■□□□□ 0.99
BRF1-203ENST00000379937 AKNAQ7Z591 1439 aa21.22■□□□□ 0.99
BRF1-203ENST00000379937 ARHGAP5Q13017 1502 aa21.22■□□□□ 0.99
BRF1-203ENST00000379937 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
BRF1-203ENST00000379937 BCL11AQ9H165 835 aa21.18■□□□□ 0.98
BRF1-203ENST00000379937 TMEM132EQ6IEE7 984 aa21.18■□□□□ 0.98
BRF1-203ENST00000379937 PLEKHH2Q8IVE3 1493 aa21.18■□□□□ 0.98
BRF1-203ENST00000379937 STK26Q9P289 416 aa21.17■□□□□ 0.98
BRF1-203ENST00000379937 PANK3Q9H999 370 aa21.17■□□□□ 0.98
BRF1-203ENST00000379937 SKAP1Q86WV1 359 aa21.16■□□□□ 0.98
BRF1-203ENST00000379937 PZPP20742 1482 aa21.15■□□□□ 0.98
BRF1-203ENST00000379937 PLIN1O60240 522 aa21.15■□□□□ 0.98
BRF1-203ENST00000379937 KIAA1107Q9UPP5 1409 aa21.14■□□□□ 0.98
BRF1-203ENST00000379937 NUP160Q12769 1436 aa21.14■□□□□ 0.97
BRF1-203ENST00000379937 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
BRF1-203ENST00000379937 SCAPERQ9BY12 1400 aa21.13■□□□□ 0.97
BRF1-203ENST00000379937 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
BRF1-203ENST00000379937 TRAK1Q9UPV9 953 aa21.12■□□□□ 0.97
BRF1-203ENST00000379937 TCOF1Q13428 1488 aaKnown RBP21.12■□□□□ 0.97
BRF1-203ENST00000379937 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
BRF1-203ENST00000379937 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
BRF1-203ENST00000379937 CDCA7LQ96GN5 454 aa21.12■□□□□ 0.97
BRF1-203ENST00000379937 RPRD2Q5VT52 1461 aaKnown RBP21.11■□□□□ 0.97
BRF1-203ENST00000379937 CNTLNQ9NXG0 1405 aa21.08■□□□□ 0.97
BRF1-203ENST00000379937 TRAPPC8Q9Y2L5 1435 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms