RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 ADAMTSL3P82987 1691 aa22.61■■□□□ 1.21
PCNA-202ENST00000379160 HECW1Q76N89 1606 aa22.61■■□□□ 1.21
PCNA-202ENST00000379160 NPM3O75607 178 aaKnown RBP22.58■■□□□ 1.21
PCNA-202ENST00000379160 PTPRMP28827 1452 aa22.57■■□□□ 1.2
PCNA-202ENST00000379160 RNF216Q9NWF9 866 aaPredicted RBP22.57■■□□□ 1.2
PCNA-202ENST00000379160 BCORL1Q5H9F3 1711 aa22.57■■□□□ 1.2
PCNA-202ENST00000379160 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
PCNA-202ENST00000379160 PLCH2O75038 1416 aa22.54■■□□□ 1.2
PCNA-202ENST00000379160 CDK11AQ9UQ88 783 aaPredicted RBP22.53■■□□□ 1.2
PCNA-202ENST00000379160 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
PCNA-202ENST00000379160 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
PCNA-202ENST00000379160 ZMYM4Q5VZL5 1548 aa22.51■■□□□ 1.19
PCNA-202ENST00000379160 MYO5CQ9NQX4 1742 aa22.5■■□□□ 1.19
PCNA-202ENST00000379160 SCAPERQ9BY12 1400 aa22.5■■□□□ 1.19
PCNA-202ENST00000379160 KIF14Q15058 1648 aa22.5■■□□□ 1.19
PCNA-202ENST00000379160 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
PCNA-202ENST00000379160 ZFYVE16Q7Z3T8 1539 aa22.49■■□□□ 1.19
PCNA-202ENST00000379160 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
PCNA-202ENST00000379160 RIMS1Q86UR5 1692 aaKnown RBP22.46■■□□□ 1.19
PCNA-202ENST00000379160 TROQ12816 1431 aaPredicted RBP22.46■■□□□ 1.19
PCNA-202ENST00000379160 POGZQ7Z3K3 1410 aa22.46■■□□□ 1.19
PCNA-202ENST00000379160 EFCAB2Q5VUJ9 269 aa22.46■■□□□ 1.19
PCNA-202ENST00000379160 SIGLEC1Q9BZZ2 1709 aa22.45■■□□□ 1.18
PCNA-202ENST00000379160 MAGI2Q86UL8 1455 aa22.44■■□□□ 1.18
PCNA-202ENST00000379160 HOXD11P31277 338 aaPredicted RBP22.44■■□□□ 1.18
PCNA-202ENST00000379160 CLIP1P30622 1438 aa22.43■■□□□ 1.18
PCNA-202ENST00000379160 ARHGAP5Q13017 1502 aa22.41■■□□□ 1.18
PCNA-202ENST00000379160 MLECQ14165 292 aa22.41■■□□□ 1.18
PCNA-202ENST00000379160 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
PCNA-202ENST00000379160 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
PCNA-202ENST00000379160 ATP10AO60312 1499 aa22.36■■□□□ 1.17
PCNA-202ENST00000379160 CCDC18Q5T9S5 1454 aa22.36■■□□□ 1.17
PCNA-202ENST00000379160 AFAP1Q8N556 730 aa22.35■■□□□ 1.17
PCNA-202ENST00000379160 LMTK3Q96Q04 1460 aa22.35■■□□□ 1.17
PCNA-202ENST00000379160 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
PCNA-202ENST00000379160 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
PCNA-202ENST00000379160 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
PCNA-202ENST00000379160 FER1L4A9Z1Z3 1794 aa22.33■■□□□ 1.17
PCNA-202ENST00000379160 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
PCNA-202ENST00000379160 KDM5CP41229 1560 aa22.29■■□□□ 1.16
PCNA-202ENST00000379160 PREX2Q70Z35 1606 aa22.29■■□□□ 1.16
PCNA-202ENST00000379160 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
PCNA-202ENST00000379160 HSPA2P54652 639 aa22.27■■□□□ 1.16
PCNA-202ENST00000379160 ARHGEF12Q9NZN5 1544 aa22.27■■□□□ 1.15
PCNA-202ENST00000379160 CDC42BPAQ5VT25 1732 aa22.25■■□□□ 1.15
PCNA-202ENST00000379160 ABCC1P33527 1531 aa22.24■■□□□ 1.15
PCNA-202ENST00000379160 TRAPPC8Q9Y2L5 1435 aa22.24■■□□□ 1.15
PCNA-202ENST00000379160 DIP2CQ9Y2E4 1556 aa22.23■■□□□ 1.15
PCNA-202ENST00000379160 ITSN2Q9NZM3 1697 aa22.23■■□□□ 1.15
PCNA-202ENST00000379160 ABCA6Q8N139 1617 aa22.21■■□□□ 1.15
PCNA-202ENST00000379160 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
PCNA-202ENST00000379160 CEBPAP49715 358 aaPredicted RBP22.21■■□□□ 1.15
PCNA-202ENST00000379160 ZNF777Q9ULD5 760 aaPredicted RBP22.2■■□□□ 1.14
PCNA-202ENST00000379160 POTEDQ86YR6 584 aa22.19■■□□□ 1.14
PCNA-202ENST00000379160 REREQ9P2R6 1566 aa22.17■■□□□ 1.14
PCNA-202ENST00000379160 FBXO41Q8TF61 875 aa22.16■■□□□ 1.14
PCNA-202ENST00000379160 GPATCH8Q9UKJ3 1502 aaKnown RBP22.15■■□□□ 1.14
PCNA-202ENST00000379160 KIDINS220Q9ULH0 1771 aa22.15■■□□□ 1.14
PCNA-202ENST00000379160 SAMD9LQ8IVG5 1584 aa22.14■■□□□ 1.14
PCNA-202ENST00000379160 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.13
PCNA-202ENST00000379160 SYCP2Q9BX26 1530 aa22.12■■□□□ 1.13
PCNA-202ENST00000379160 HNRNPMP52272 730 aaKnown RBP eCLIP22.11■■□□□ 1.13
PCNA-202ENST00000379160 AGLP35573 1532 aa22.1■■□□□ 1.13
PCNA-202ENST00000379160 MTUS2Q5JR59 1369 aa22.1■■□□□ 1.13
PCNA-202ENST00000379160 ESF1Q9H501 851 aaKnown RBP22.1■■□□□ 1.13
PCNA-202ENST00000379160 CFDP1Q9UEE9 299 aaPredicted RBP22.1■■□□□ 1.13
PCNA-202ENST00000379160 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
PCNA-202ENST00000379160 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.12
PCNA-202ENST00000379160 C3P01024 1663 aa22.06■■□□□ 1.12
PCNA-202ENST00000379160 SETD1BQ9UPS6 1966 aaKnown RBP22.05■■□□□ 1.12
PCNA-202ENST00000379160 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
PCNA-202ENST00000379160 UHRF1BP1Q6BDS2 1440 aa22.04■■□□□ 1.12
PCNA-202ENST00000379160 KIAA1107Q9UPP5 1409 aa22.04■■□□□ 1.12
PCNA-202ENST00000379160 PLEKHH2Q8IVE3 1493 aa22.03■■□□□ 1.12
PCNA-202ENST00000379160 SUPT6HQ7KZ85 1726 aaKnown RBP22.02■■□□□ 1.12
PCNA-202ENST00000379160 ATP7AQ04656 1500 aa22.02■■□□□ 1.12
PCNA-202ENST00000379160 EHBP1L1Q8N3D4 1523 aa22■■□□□ 1.11
PCNA-202ENST00000379160 ZNF644Q9H582 1327 aaPredicted RBP21.99■■□□□ 1.11
PCNA-202ENST00000379160 TIAM1Q13009 1591 aa21.99■■□□□ 1.11
PCNA-202ENST00000379160 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
PCNA-202ENST00000379160 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
PCNA-202ENST00000379160 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
PCNA-202ENST00000379160 CERKQ8TCT0 537 aa21.97■■□□□ 1.11
PCNA-202ENST00000379160 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
PCNA-202ENST00000379160 A2MP01023 1474 aa21.95■■□□□ 1.11
PCNA-202ENST00000379160 PLXNC1O60486 1568 aa21.93■■□□□ 1.1
PCNA-202ENST00000379160 MROH2AA6NES4 1674 aa21.92■■□□□ 1.1
PCNA-202ENST00000379160 ZMYM3Q14202 1370 aa21.92■■□□□ 1.1
PCNA-202ENST00000379160 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
PCNA-202ENST00000379160 GGT6Q6P531 493 aa21.91■■□□□ 1.1
PCNA-202ENST00000379160 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
PCNA-202ENST00000379160 ADGBQ8N7X0 1667 aa21.9■■□□□ 1.1
PCNA-202ENST00000379160 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.1
PCNA-202ENST00000379160 NCOA2Q15596 1464 aa21.88■■□□□ 1.09
PCNA-202ENST00000379160 NPATQ14207 1427 aa21.87■■□□□ 1.09
PCNA-202ENST00000379160 RTEL1-TNFRSF6BF6WH68 1400 aa21.84■■□□□ 1.09
PCNA-202ENST00000379160 PTPRTO14522 1441 aa21.84■■□□□ 1.09
PCNA-202ENST00000379160 CAMSAP2Q08AD1 1489 aa21.83■■□□□ 1.09
PCNA-202ENST00000379160 NCOA1Q15788 1441 aa21.83■■□□□ 1.08
PCNA-202ENST00000379160 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms