RNA–Protein interactions for RNA: ENST00000379060.8

TPT1-204, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 5 BASIC

Gene TPT1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-204ENST00000379060 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
TPT1-204ENST00000379060 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
TPT1-204ENST00000379060 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
TPT1-204ENST00000379060 KIF3CO14782 793 aa11.82□□□□□ -0.52
TPT1-204ENST00000379060 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
TPT1-204ENST00000379060 VSIG10Q8N0Z9 540 aa11.8□□□□□ -0.52
TPT1-204ENST00000379060 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
TPT1-204ENST00000379060 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
TPT1-204ENST00000379060 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
TPT1-204ENST00000379060 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
TPT1-204ENST00000379060 MFSD10Q14728 455 aa11.77□□□□□ -0.53
TPT1-204ENST00000379060 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
TPT1-204ENST00000379060 PDE4AP27815 886 aa11.76□□□□□ -0.53
TPT1-204ENST00000379060 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
TPT1-204ENST00000379060 TMC2Q8TDI7 906 aa11.74□□□□□ -0.53
TPT1-204ENST00000379060 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
TPT1-204ENST00000379060 DSG2Q14126 1118 aa11.72□□□□□ -0.53
TPT1-204ENST00000379060 FOXK1P85037 733 aa11.71□□□□□ -0.53
TPT1-204ENST00000379060 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
TPT1-204ENST00000379060 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
TPT1-204ENST00000379060 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
TPT1-204ENST00000379060 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
TPT1-204ENST00000379060 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
TPT1-204ENST00000379060 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
TPT1-204ENST00000379060 PLSCR2Q9NRY7 297 aa11.62□□□□□ -0.55
TPT1-204ENST00000379060 HOXB3P14651 431 aaPredicted RBP11.59□□□□□ -0.55
TPT1-204ENST00000379060 E2F4Q16254 413 aa11.59□□□□□ -0.55
TPT1-204ENST00000379060 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
TPT1-204ENST00000379060 EMILIN3Q9NT22 766 aa11.59□□□□□ -0.55
TPT1-204ENST00000379060 ABCC9O60706 1549 aa11.59□□□□□ -0.55
TPT1-204ENST00000379060 SLC34A2O95436 690 aa11.56□□□□□ -0.56
TPT1-204ENST00000379060 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
TPT1-204ENST00000379060 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
TPT1-204ENST00000379060 P3H3Q8IVL6 736 aa11.52□□□□□ -0.57
TPT1-204ENST00000379060 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
TPT1-204ENST00000379060 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
TPT1-204ENST00000379060 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
TPT1-204ENST00000379060 SNPHO15079 494 aa11.48□□□□□ -0.57
TPT1-204ENST00000379060 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
TPT1-204ENST00000379060 ZCCHC6Q5VYS8 1495 aaKnown RBP11.48□□□□□ -0.57
TPT1-204ENST00000379060 DPYSL4O14531 572 aa11.47□□□□□ -0.57
TPT1-204ENST00000379060 PCDHGA4Q9Y5G9 962 aa11.47□□□□□ -0.57
TPT1-204ENST00000379060 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
TPT1-204ENST00000379060 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
TPT1-204ENST00000379060 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
TPT1-204ENST00000379060 PDIA6Q15084 440 aa11.42□□□□□ -0.58
TPT1-204ENST00000379060 ARSIQ5FYB1 569 aa11.42□□□□□ -0.58
TPT1-204ENST00000379060 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■□□□ 14
TPT1-204ENST00000379060 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
TPT1-204ENST00000379060 MAP3K9P80192 1104 aa11.41□□□□□ -0.58
TPT1-204ENST00000379060 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
TPT1-204ENST00000379060 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.58
TPT1-204ENST00000379060 POTEMA6NI47 508 aa11.4□□□□□ -0.58
TPT1-204ENST00000379060 ZNF710Q8N1W2 664 aa11.4□□□□□ -0.58
TPT1-204ENST00000379060 ST18O60284 1047 aa11.39□□□□□ -0.59
TPT1-204ENST00000379060 TBC1D12O60347 775 aa11.39□□□□□ -0.59
TPT1-204ENST00000379060 HOXB1P14653 301 aaPredicted RBP11.39□□□□□ -0.59
TPT1-204ENST00000379060 NACADO15069 1562 aa11.38□□□□□ -0.59
TPT1-204ENST00000379060 EVI5O60447 810 aa11.38□□□□□ -0.59
TPT1-204ENST00000379060 SPDYE16A6NNV3 312 aaPredicted RBP11.37□□□□□ -0.59
TPT1-204ENST00000379060 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
TPT1-204ENST00000379060 NUDT7P0C024 238 aa11.36□□□□□ -0.59
TPT1-204ENST00000379060 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
TPT1-204ENST00000379060 POTEGQ6S5H5 508 aa11.35□□□□□ -0.59
TPT1-204ENST00000379060 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
TPT1-204ENST00000379060 SEMA3EO15041 775 aa11.34□□□□□ -0.59
TPT1-204ENST00000379060 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
TPT1-204ENST00000379060 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
TPT1-204ENST00000379060 PTGER2P43116 358 aa11.31□□□□□ -0.6
TPT1-204ENST00000379060 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
TPT1-204ENST00000379060 NBR1Q14596 966 aa11.29□□□□□ -0.6
TPT1-204ENST00000379060 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
TPT1-204ENST00000379060 ZNF316A6NFI3 1004 aaPredicted RBP11.27□□□□□ -0.61
TPT1-204ENST00000379060 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
TPT1-204ENST00000379060 BCANQ96GW7 911 aa11.27□□□□□ -0.61
TPT1-204ENST00000379060 DDX12PQ92771 950 aa11.25□□□□□ -0.61
TPT1-204ENST00000379060 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
TPT1-204ENST00000379060 FOSBP53539 338 aa11.24□□□□□ -0.61
TPT1-204ENST00000379060 JPH4Q96JJ6 628 aa11.24□□□□□ -0.61
TPT1-204ENST00000379060 EMP3P54852 163 aa11.23□□□□□ -0.61
TPT1-204ENST00000379060 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
TPT1-204ENST00000379060 PHF14O94880 888 aa11.22□□□□□ -0.61
TPT1-204ENST00000379060 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
TPT1-204ENST00000379060 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
TPT1-204ENST00000379060 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
TPT1-204ENST00000379060 OSBPP22059 807 aa11.21□□□□□ -0.61
TPT1-204ENST00000379060 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
TPT1-204ENST00000379060 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
TPT1-204ENST00000379060 ERBB3P21860 1342 aa11.18□□□□□ -0.62
TPT1-204ENST00000379060 VARS2Q5ST30 1063 aaKnown RBP11.18□□□□□ -0.62
TPT1-204ENST00000379060 EPAS1Q99814 870 aa11.18□□□□□ -0.62
TPT1-204ENST00000379060 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
TPT1-204ENST00000379060 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
TPT1-204ENST00000379060 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
TPT1-204ENST00000379060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
TPT1-204ENST00000379060 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
TPT1-204ENST00000379060 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
TPT1-204ENST00000379060 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
TPT1-204ENST00000379060 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
TPT1-204ENST00000379060 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms