RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 CD109Q6YHK3 1445 aa10.83□□□□□ -0.68
GPCPD1-201ENST00000379019 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
GPCPD1-201ENST00000379019 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
GPCPD1-201ENST00000379019 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
GPCPD1-201ENST00000379019 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
GPCPD1-201ENST00000379019 TRIM52Q96A61 297 aa10.79□□□□□ -0.68
GPCPD1-201ENST00000379019 ZMYM4Q5VZL5 1548 aa10.78□□□□□ -0.68
GPCPD1-201ENST00000379019 MYO5CQ9NQX4 1742 aa10.78□□□□□ -0.68
GPCPD1-201ENST00000379019 PLEKHH2Q8IVE3 1493 aa10.78□□□□□ -0.68
GPCPD1-201ENST00000379019 CCDC184Q52MB2 194 aa10.78□□□□□ -0.68
GPCPD1-201ENST00000379019 IRX6P78412 446 aaPredicted RBP10.78□□□□□ -0.68
GPCPD1-201ENST00000379019 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.68
GPCPD1-201ENST00000379019 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.68
GPCPD1-201ENST00000379019 SENP3-EIF4A1A0A087X0R7 540 aa10.77□□□□□ -0.69
GPCPD1-201ENST00000379019 PLCH2O75038 1416 aa10.76□□□□□ -0.69
GPCPD1-201ENST00000379019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.76□□□□□ -0.692e-7■■■■□ 20.8
GPCPD1-201ENST00000379019 DDX10Q13206 875 aaKnown RBP10.74□□□□□ -0.69
GPCPD1-201ENST00000379019 ITSN2Q9NZM3 1697 aa10.74□□□□□ -0.69
GPCPD1-201ENST00000379019 PREX2Q70Z35 1606 aa10.74□□□□□ -0.69
GPCPD1-201ENST00000379019 ANP32EQ9BTT0 268 aa10.73□□□□□ -0.69
GPCPD1-201ENST00000379019 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
GPCPD1-201ENST00000379019 FKBP8Q14318 412 aa10.72□□□□□ -0.69
GPCPD1-201ENST00000379019 DENND4BO75064 1496 aaPredicted RBP10.72□□□□□ -0.69
GPCPD1-201ENST00000379019 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
GPCPD1-201ENST00000379019 RBM19Q9Y4C8 960 aaKnown RBP10.71□□□□□ -0.69
GPCPD1-201ENST00000379019 FANCAO15360 1455 aa10.71□□□□□ -0.7
GPCPD1-201ENST00000379019 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
GPCPD1-201ENST00000379019 CDK13Q14004 1512 aaKnown RBP10.7□□□□□ -0.7
GPCPD1-201ENST00000379019 TTC37Q6PGP7 1564 aa10.7□□□□□ -0.7
GPCPD1-201ENST00000379019 AKNAQ7Z591 1439 aa10.7□□□□□ -0.7
GPCPD1-201ENST00000379019 FAM135AQ9P2D6 1515 aa10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 KIAA1107Q9UPP5 1409 aa10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 EFCAB2Q5VUJ9 269 aa10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 RICTORQ6R327 1708 aa10.69□□□□□ -0.7
GPCPD1-201ENST00000379019 LRRIQ1Q96JM4 1722 aa10.68□□□□□ -0.7
GPCPD1-201ENST00000379019 KDM5CP41229 1560 aa10.68□□□□□ -0.7
GPCPD1-201ENST00000379019 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
GPCPD1-201ENST00000379019 ZNF518AQ6AHZ1 1483 aa10.67□□□□□ -0.7
GPCPD1-201ENST00000379019 POGZQ7Z3K3 1410 aa10.67□□□□□ -0.7
GPCPD1-201ENST00000379019 TIAM1Q13009 1591 aa10.66□□□□□ -0.7
GPCPD1-201ENST00000379019 FRMPD1Q5SYB0 1578 aa10.66□□□□□ -0.7
GPCPD1-201ENST00000379019 RRBP1Q9P2E9 1410 aaKnown RBP10.66□□□□□ -0.7
GPCPD1-201ENST00000379019 ABCC1P33527 1531 aa10.65□□□□□ -0.7
GPCPD1-201ENST00000379019 ZFYVE16Q7Z3T8 1539 aa10.65□□□□□ -0.7
GPCPD1-201ENST00000379019 RSPH4AQ5TD94 716 aa10.65□□□□□ -0.7
GPCPD1-201ENST00000379019 ADGRL1O94910 1474 aa10.65□□□□□ -0.7
GPCPD1-201ENST00000379019 ARHGAP5Q13017 1502 aa10.65□□□□□ -0.71
GPCPD1-201ENST00000379019 MLH3Q9UHC1 1453 aa10.64□□□□□ -0.71
GPCPD1-201ENST00000379019 PTPRKQ15262 1439 aa10.63□□□□□ -0.71
GPCPD1-201ENST00000379019 AGLP35573 1532 aa10.63□□□□□ -0.71
GPCPD1-201ENST00000379019 HECW2Q9P2P5 1572 aa10.63□□□□□ -0.71
GPCPD1-201ENST00000379019 CDC42BPAQ5VT25 1732 aa10.63□□□□□ -0.71
GPCPD1-201ENST00000379019 MTUS2Q5JR59 1369 aa10.62□□□□□ -0.71
GPCPD1-201ENST00000379019 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
GPCPD1-201ENST00000379019 MIA2Q96PC5 1412 aa10.62□□□□□ -0.71
GPCPD1-201ENST00000379019 CDC42BPBQ9Y5S2 1711 aa10.62□□□□□ -0.71
GPCPD1-201ENST00000379019 ARHGEF5Q12774 1597 aa10.62□□□□□ -0.71
GPCPD1-201ENST00000379019 C9orf84Q5VXU9 1444 aa10.61□□□□□ -0.71
GPCPD1-201ENST00000379019 RTEL1-TNFRSF6BF6WH68 1400 aa10.61□□□□□ -0.71
GPCPD1-201ENST00000379019 CCNB3Q8WWL7 1395 aa10.6□□□□□ -0.71
GPCPD1-201ENST00000379019 ATP10AO60312 1499 aa10.6□□□□□ -0.71
GPCPD1-201ENST00000379019 GPATCH8Q9UKJ3 1502 aaKnown RBP10.6□□□□□ -0.71
GPCPD1-201ENST00000379019 COL17A1Q9UMD9 1497 aaPredicted RBP10.59□□□□□ -0.71
GPCPD1-201ENST00000379019 MAST1Q9Y2H9 1570 aa10.59□□□□□ -0.71
GPCPD1-201ENST00000379019 SCAPERQ9BY12 1400 aa10.59□□□□□ -0.71
GPCPD1-201ENST00000379019 LRRC9Q6ZRR7 1453 aa10.59□□□□□ -0.71
GPCPD1-201ENST00000379019 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
GPCPD1-201ENST00000379019 ADAMTSL3P82987 1691 aa10.58□□□□□ -0.72
GPCPD1-201ENST00000379019 BCORL1Q5H9F3 1711 aa10.58□□□□□ -0.72
GPCPD1-201ENST00000379019 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
GPCPD1-201ENST00000379019 CNTLNQ9NXG0 1405 aa10.56□□□□□ -0.72
GPCPD1-201ENST00000379019 INO80Q9ULG1 1556 aaPredicted RBP10.56□□□□□ -0.72
GPCPD1-201ENST00000379019 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
GPCPD1-201ENST00000379019 PAK3O75914 559 aaPredicted RBP10.55□□□□□ -0.72
GPCPD1-201ENST00000379019 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
GPCPD1-201ENST00000379019 SHANK2Q9UPX8 1470 aa10.55□□□□□ -0.72
GPCPD1-201ENST00000379019 APLP2Q06481 763 aa10.54□□□□□ -0.72
GPCPD1-201ENST00000379019 MROH2AA6NES4 1674 aa10.54□□□□□ -0.72
GPCPD1-201ENST00000379019 DIP2CQ9Y2E4 1556 aa10.53□□□□□ -0.72
GPCPD1-201ENST00000379019 ARHGEF12Q9NZN5 1544 aa10.53□□□□□ -0.72
GPCPD1-201ENST00000379019 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
GPCPD1-201ENST00000379019 CCDC141Q6ZP82 1450 aa10.53□□□□□ -0.72
GPCPD1-201ENST00000379019 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.72
GPCPD1-201ENST00000379019 SKAP1Q86WV1 359 aa10.52□□□□□ -0.72
GPCPD1-201ENST00000379019 EIF2AK4Q9P2K8 1649 aaKnown RBP10.52□□□□□ -0.72
GPCPD1-201ENST00000379019 AEBP2Q6ZN18 517 aaPredicted RBP10.52□□□□□ -0.73
GPCPD1-201ENST00000379019 ATP7AQ04656 1500 aa10.52□□□□□ -0.73
GPCPD1-201ENST00000379019 MYOM3Q5VTT5 1437 aa10.52□□□□□ -0.73
GPCPD1-201ENST00000379019 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
GPCPD1-201ENST00000379019 CFDP1Q9UEE9 299 aaPredicted RBP10.51□□□□□ -0.73
GPCPD1-201ENST00000379019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.5□□□□□ -0.73
GPCPD1-201ENST00000379019 FOXD1Q16676 465 aa10.5□□□□□ -0.73
GPCPD1-201ENST00000379019 SYCP2Q9BX26 1530 aa10.49□□□□□ -0.73
GPCPD1-201ENST00000379019 CAMSAP2Q08AD1 1489 aa10.49□□□□□ -0.73
GPCPD1-201ENST00000379019 ABCA6Q8N139 1617 aa10.49□□□□□ -0.73
GPCPD1-201ENST00000379019 KIDINS220Q9ULH0 1771 aa10.49□□□□□ -0.73
GPCPD1-201ENST00000379019 ZC3H13Q5T200 1668 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms