RNA–Protein interactions for RNA: ENST00000378883.5

MCM8-202, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM8, Length 3,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-202ENST00000378883 SKAP1Q86WV1 359 aa11.58□□□□□ -0.56
MCM8-202ENST00000378883 POGKQ9P215 609 aa11.58□□□□□ -0.56
MCM8-202ENST00000378883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.57□□□□□ -0.56
MCM8-202ENST00000378883 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
MCM8-202ENST00000378883 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
MCM8-202ENST00000378883 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
MCM8-202ENST00000378883 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
MCM8-202ENST00000378883 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
MCM8-202ENST00000378883 HFM1A2PYH4 1435 aa11.54□□□□□ -0.56
MCM8-202ENST00000378883 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.564e-6■■■□□ 19.1
MCM8-202ENST00000378883 FAM161AQ3B820 660 aa11.51□□□□□ -0.57
MCM8-202ENST00000378883 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
MCM8-202ENST00000378883 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
MCM8-202ENST00000378883 PTPN23Q9H3S7 1636 aa11.51□□□□□ -0.57
MCM8-202ENST00000378883 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
MCM8-202ENST00000378883 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
MCM8-202ENST00000378883 XRCC6P12956 609 aaKnown RBP eCLIP11.5□□□□□ -0.57
MCM8-202ENST00000378883 L3MBTL2Q969R5 705 aa11.5□□□□□ -0.57
MCM8-202ENST00000378883 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
MCM8-202ENST00000378883 AAMPQ13685 434 aa11.49□□□□□ -0.57
MCM8-202ENST00000378883 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
MCM8-202ENST00000378883 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
MCM8-202ENST00000378883 ARXQ96QS3 562 aa11.49□□□□□ -0.57
MCM8-202ENST00000378883 PDCL3Q9H2J4 239 aa11.49□□□□□ -0.57
MCM8-202ENST00000378883 NAIPQ13075 1403 aa11.48□□□□□ -0.57
MCM8-202ENST00000378883 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
MCM8-202ENST00000378883 FMN1Q68DA7 1419 aa11.48□□□□□ -0.57
MCM8-202ENST00000378883 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
MCM8-202ENST00000378883 CALD1Q05682 793 aaKnown RBP11.48□□□□□ -0.57
MCM8-202ENST00000378883 CRBNQ96SW2 442 aa11.47□□□□□ -0.57
MCM8-202ENST00000378883 GOLGA6L3A6NEY3 463 aa11.47□□□□□ -0.57
MCM8-202ENST00000378883 PLIN1O60240 522 aa11.47□□□□□ -0.57
MCM8-202ENST00000378883 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
MCM8-202ENST00000378883 PRDM4Q9UKN5 801 aa11.47□□□□□ -0.57
MCM8-202ENST00000378883 PRDM2Q13029 1718 aa11.46□□□□□ -0.57
MCM8-202ENST00000378883 KTN1Q86UP2 1357 aaKnown RBP11.46□□□□□ -0.57
MCM8-202ENST00000378883 SPATA31E1Q6ZUB1 1445 aa11.46□□□□□ -0.57
MCM8-202ENST00000378883 FGD1P98174 961 aa11.46□□□□□ -0.58
MCM8-202ENST00000378883 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.58
MCM8-202ENST00000378883 PANK2Q9BZ23 570 aa11.46□□□□□ -0.58
MCM8-202ENST00000378883 POLR1AO95602 1720 aaPredicted RBP11.45□□□□□ -0.58
MCM8-202ENST00000378883 NBPF8Q3BBV2 869 aa11.45□□□□□ -0.58
MCM8-202ENST00000378883 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
MCM8-202ENST00000378883 PDE3BQ13370 1112 aa11.44□□□□□ -0.58
MCM8-202ENST00000378883 ARID4BQ4LE39 1312 aaPredicted RBP11.44□□□□□ -0.58
MCM8-202ENST00000378883 FSD2A1L4K1 749 aa11.44□□□□□ -0.58
MCM8-202ENST00000378883 TPM2P07951 284 aa11.44□□□□□ -0.58
MCM8-202ENST00000378883 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
MCM8-202ENST00000378883 CENPQQ7L2Z9 268 aaPredicted RBP11.43□□□□□ -0.58
MCM8-202ENST00000378883 PCF11O94913 1555 aaKnown RBP11.43□□□□□ -0.58
MCM8-202ENST00000378883 RGS3P49796 1198 aa11.42□□□□□ -0.58
MCM8-202ENST00000378883 ESPNB1AK53 854 aa11.42□□□□□ -0.58
MCM8-202ENST00000378883 SLKQ9H2G2 1235 aaPredicted RBP11.42□□□□□ -0.58
MCM8-202ENST00000378883 DENND4BO75064 1496 aaPredicted RBP11.42□□□□□ -0.58
MCM8-202ENST00000378883 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.58
MCM8-202ENST00000378883 BECN1Q14457 450 aa11.4□□□□□ -0.58
MCM8-202ENST00000378883 BRD4O60885 1362 aaPredicted RBP11.39□□□□□ -0.59
MCM8-202ENST00000378883 MYOM3Q5VTT5 1437 aa11.39□□□□□ -0.59
MCM8-202ENST00000378883 GZF1Q9H116 711 aaPredicted RBP11.39□□□□□ -0.59
MCM8-202ENST00000378883 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
MCM8-202ENST00000378883 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
MCM8-202ENST00000378883 MRE11P49959 708 aa11.38□□□□□ -0.59
MCM8-202ENST00000378883 C20orf194Q5TEA3 1177 aa11.38□□□□□ -0.59
MCM8-202ENST00000378883 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
MCM8-202ENST00000378883 PDE4CQ08493 712 aa11.37□□□□□ -0.59
MCM8-202ENST00000378883 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
MCM8-202ENST00000378883 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
MCM8-202ENST00000378883 ANTXR1Q9H6X2 564 aa11.37□□□□□ -0.59
MCM8-202ENST00000378883 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
MCM8-202ENST00000378883 USP19O94966 1318 aa11.36□□□□□ -0.59
MCM8-202ENST00000378883 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
MCM8-202ENST00000378883 FOXD1Q16676 465 aa11.36□□□□□ -0.59
MCM8-202ENST00000378883 CUX1P39880 1505 aa11.36□□□□□ -0.59
MCM8-202ENST00000378883 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
MCM8-202ENST00000378883 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
MCM8-202ENST00000378883 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
MCM8-202ENST00000378883 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
MCM8-202ENST00000378883 MCM4P33991 863 aa11.33□□□□□ -0.6
MCM8-202ENST00000378883 RALBP1Q15311 655 aa11.33□□□□□ -0.6
MCM8-202ENST00000378883 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
MCM8-202ENST00000378883 TEX14Q8IWB6 1497 aa11.33□□□□□ -0.6
MCM8-202ENST00000378883 CASKIN1Q8WXD9 1431 aa11.33□□□□□ -0.6
MCM8-202ENST00000378883 IGF1RP08069 1367 aa11.33□□□□□ -0.6
MCM8-202ENST00000378883 RPRD2Q5VT52 1461 aaKnown RBP11.33□□□□□ -0.6
MCM8-202ENST00000378883 CHIC2Q9UKJ5 165 aa11.32□□□□□ -0.6
MCM8-202ENST00000378883 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
MCM8-202ENST00000378883 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
MCM8-202ENST00000378883 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
MCM8-202ENST00000378883 USP47Q96K76 1375 aa11.32□□□□□ -0.6
MCM8-202ENST00000378883 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
MCM8-202ENST00000378883 TRAK2O60296 914 aa11.31□□□□□ -0.6
MCM8-202ENST00000378883 MAP7D2Q96T17 732 aa11.31□□□□□ -0.6
MCM8-202ENST00000378883 SEC24BO95487 1268 aa11.3□□□□□ -0.6
MCM8-202ENST00000378883 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
MCM8-202ENST00000378883 ANKRD30BQ9BXX2 1392 aa11.3□□□□□ -0.6
MCM8-202ENST00000378883 ATAD2BQ9ULI0 1458 aa11.3□□□□□ -0.6
MCM8-202ENST00000378883 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
MCM8-202ENST00000378883 RIPK4P57078 832 aa11.29□□□□□ -0.6
MCM8-202ENST00000378883 NLRP13Q86W25 1043 aa11.29□□□□□ -0.6
MCM8-202ENST00000378883 SMAP1Q8IYB5 467 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms