RNA–Protein interactions for RNA: ENST00000378757.6

OPTN-205, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-205ENST00000378757 FKBP8Q14318 412 aa13.45□□□□□ -0.26
OPTN-205ENST00000378757 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
OPTN-205ENST00000378757 SUPT16HQ9Y5B9 1047 aaKnown RBP13.43□□□□□ -0.26
OPTN-205ENST00000378757 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
OPTN-205ENST00000378757 NEFLP07196 543 aa13.42□□□□□ -0.26
OPTN-205ENST00000378757 CHD1O14646 1710 aa13.42□□□□□ -0.26
OPTN-205ENST00000378757 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
OPTN-205ENST00000378757 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
OPTN-205ENST00000378757 L3MBTL2Q969R5 705 aa13.41□□□□□ -0.26
OPTN-205ENST00000378757 NAIPQ13075 1403 aa13.41□□□□□ -0.26
OPTN-205ENST00000378757 IRX6P78412 446 aaPredicted RBP13.41□□□□□ -0.26
OPTN-205ENST00000378757 HNRNPUQ00839 825 aaKnown RBP eCLIP13.4□□□□□ -0.26
OPTN-205ENST00000378757 KDM6BO15054 1643 aa13.4□□□□□ -0.26
OPTN-205ENST00000378757 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
OPTN-205ENST00000378757 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
OPTN-205ENST00000378757 FAM9BQ8IZU0 186 aa13.38□□□□□ -0.27
OPTN-205ENST00000378757 PRG4Q92954 1404 aaPredicted RBP13.38□□□□□ -0.27
OPTN-205ENST00000378757 KIF14Q15058 1648 aa13.37□□□□□ -0.27
OPTN-205ENST00000378757 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
OPTN-205ENST00000378757 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
OPTN-205ENST00000378757 ABCA8O94911 1581 aa13.36□□□□□ -0.27
OPTN-205ENST00000378757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.271e-7■■■□□ 16.3
OPTN-205ENST00000378757 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
OPTN-205ENST00000378757 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
OPTN-205ENST00000378757 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
OPTN-205ENST00000378757 DENND4BO75064 1496 aaPredicted RBP13.34□□□□□ -0.27
OPTN-205ENST00000378757 UACAQ9BZF9 1416 aa13.34□□□□□ -0.27
OPTN-205ENST00000378757 CARMIL2Q6F5E8 1435 aa13.34□□□□□ -0.27
OPTN-205ENST00000378757 ADCY10Q96PN6 1610 aa13.33□□□□□ -0.27
OPTN-205ENST00000378757 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
OPTN-205ENST00000378757 TROQ12816 1431 aaPredicted RBP13.31□□□□□ -0.28
OPTN-205ENST00000378757 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
OPTN-205ENST00000378757 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
OPTN-205ENST00000378757 ERCC6L2Q5T890 1561 aa13.31□□□□□ -0.28
OPTN-205ENST00000378757 PKD2Q13563 968 aa13.31□□□□□ -0.28
OPTN-205ENST00000378757 ATP10BO94823 1461 aa13.31□□□□□ -0.28
OPTN-205ENST00000378757 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
OPTN-205ENST00000378757 TSPY4P0CV99 314 aa13.3□□□□□ -0.28
OPTN-205ENST00000378757 TSPY10P0CW01 314 aa13.3□□□□□ -0.28
OPTN-205ENST00000378757 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
OPTN-205ENST00000378757 DAPK1P53355 1430 aa13.29□□□□□ -0.28
OPTN-205ENST00000378757 ABCC5O15440 1437 aa13.29□□□□□ -0.28
OPTN-205ENST00000378757 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
OPTN-205ENST00000378757 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
OPTN-205ENST00000378757 CDC42BPAQ5VT25 1732 aa13.28□□□□□ -0.28
OPTN-205ENST00000378757 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
OPTN-205ENST00000378757 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
OPTN-205ENST00000378757 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
OPTN-205ENST00000378757 AKNAQ7Z591 1439 aa13.26□□□□□ -0.29
OPTN-205ENST00000378757 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
OPTN-205ENST00000378757 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
OPTN-205ENST00000378757 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
OPTN-205ENST00000378757 CCDC184Q52MB2 194 aa13.26□□□□□ -0.29
OPTN-205ENST00000378757 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
OPTN-205ENST00000378757 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
OPTN-205ENST00000378757 CROCC2H7BZ55 1655 aa13.24□□□□□ -0.29
OPTN-205ENST00000378757 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
OPTN-205ENST00000378757 PTPRGP23470 1445 aa13.23□□□□□ -0.29
OPTN-205ENST00000378757 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
OPTN-205ENST00000378757 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
OPTN-205ENST00000378757 NUP155O75694 1391 aa13.21□□□□□ -0.29
OPTN-205ENST00000378757 CCER2I3L3R5 266 aa13.21□□□□□ -0.3
OPTN-205ENST00000378757 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
OPTN-205ENST00000378757 ADGBQ8N7X0 1667 aa13.2□□□□□ -0.3
OPTN-205ENST00000378757 CDC42BPBQ9Y5S2 1711 aa13.19□□□□□ -0.3
OPTN-205ENST00000378757 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
OPTN-205ENST00000378757 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
OPTN-205ENST00000378757 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
OPTN-205ENST00000378757 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
OPTN-205ENST00000378757 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.31
OPTN-205ENST00000378757 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
OPTN-205ENST00000378757 SAMD9LQ8IVG5 1584 aa13.14□□□□□ -0.31
OPTN-205ENST00000378757 PREX2Q70Z35 1606 aa13.14□□□□□ -0.31
OPTN-205ENST00000378757 ANKRD30AQ9BXX3 1397 aa13.13□□□□□ -0.31
OPTN-205ENST00000378757 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
OPTN-205ENST00000378757 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
OPTN-205ENST00000378757 ABCC2Q92887 1545 aa13.13□□□□□ -0.31
OPTN-205ENST00000378757 PZPP20742 1482 aa13.13□□□□□ -0.31
OPTN-205ENST00000378757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
OPTN-205ENST00000378757 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
OPTN-205ENST00000378757 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
OPTN-205ENST00000378757 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
OPTN-205ENST00000378757 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
OPTN-205ENST00000378757 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
OPTN-205ENST00000378757 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
OPTN-205ENST00000378757 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
OPTN-205ENST00000378757 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
OPTN-205ENST00000378757 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
OPTN-205ENST00000378757 SHANK2Q9UPX8 1470 aa13.08□□□□□ -0.32
OPTN-205ENST00000378757 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
OPTN-205ENST00000378757 USP47Q96K76 1375 aa13.06□□□□□ -0.32
OPTN-205ENST00000378757 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
OPTN-205ENST00000378757 B4GALNT3Q6L9W6 998 aa13.06□□□□□ -0.32
OPTN-205ENST00000378757 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
OPTN-205ENST00000378757 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
OPTN-205ENST00000378757 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
OPTN-205ENST00000378757 SYCP2Q9BX26 1530 aa13.05□□□□□ -0.32
OPTN-205ENST00000378757 CC2D1BQ5T0F9 858 aaKnown RBP13.03□□□□□ -0.32
OPTN-205ENST00000378757 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
OPTN-205ENST00000378757 NBPF1Q3BBV0 1214 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms