RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 NCLP19338 710 aaKnown RBP24.2■■□□□ 1.46
CNTNAP3B-203ENST00000377561 EFCAB2Q5VUJ9 269 aa24.19■■□□□ 1.46
CNTNAP3B-203ENST00000377561 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
CNTNAP3B-203ENST00000377561 PNNQ9H307 717 aaKnown RBP24.18■■□□□ 1.46
CNTNAP3B-203ENST00000377561 U2SURPO15042 1029 aaKnown RBP24.17■■□□□ 1.46
CNTNAP3B-203ENST00000377561 CHMP4BQ9H444 224 aaKnown RBP24.16■■□□□ 1.46
CNTNAP3B-203ENST00000377561 MORC1Q86VD1 984 aa24.15■■□□□ 1.46
CNTNAP3B-203ENST00000377561 GOLGA6L22H0YM25 854 aa24.15■■□□□ 1.46
CNTNAP3B-203ENST00000377561 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
CNTNAP3B-203ENST00000377561 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
CNTNAP3B-203ENST00000377561 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
CNTNAP3B-203ENST00000377561 CASC1Q6TDU7 716 aa24.11■■□□□ 1.45
CNTNAP3B-203ENST00000377561 IGF1RP08069 1367 aa24.11■■□□□ 1.45
CNTNAP3B-203ENST00000377561 HNRNPMP52272 730 aaKnown RBP eCLIP24.1■■□□□ 1.45
CNTNAP3B-203ENST00000377561 SRPK2P78362 688 aaKnown RBP24.09■■□□□ 1.45
CNTNAP3B-203ENST00000377561 GGT6Q6P531 493 aa24.08■■□□□ 1.45
CNTNAP3B-203ENST00000377561 RCAN3Q9UKA8 241 aa24.07■■□□□ 1.44
CNTNAP3B-203ENST00000377561 JPH4Q96JJ6 628 aa24.06■■□□□ 1.44
CNTNAP3B-203ENST00000377561 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
CNTNAP3B-203ENST00000377561 TRIM44Q96DX7 344 aaPredicted RBP24.06■■□□□ 1.44
CNTNAP3B-203ENST00000377561 RTN4Q9NQC3 1192 aaKnown RBP24.06■■□□□ 1.44
CNTNAP3B-203ENST00000377561 KIF21BO75037 1637 aa24.04■■□□□ 1.44
CNTNAP3B-203ENST00000377561 HDGFP51858 240 aaKnown RBP24.02■■□□□ 1.44
CNTNAP3B-203ENST00000377561 ZRSR1Q15695 479 aaKnown RBP24.01■■□□□ 1.43
CNTNAP3B-203ENST00000377561 EIF3AQ14152 1382 aaKnown RBP24.01■■□□□ 1.43
CNTNAP3B-203ENST00000377561 SAFB2Q14151 953 aaKnown RBP eCLIP24■■□□□ 1.43
CNTNAP3B-203ENST00000377561 NLRP13Q86W25 1043 aa23.98■■□□□ 1.43
CNTNAP3B-203ENST00000377561 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
CNTNAP3B-203ENST00000377561 KIF3BO15066 747 aa23.96■■□□□ 1.43
CNTNAP3B-203ENST00000377561 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
CNTNAP3B-203ENST00000377561 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
CNTNAP3B-203ENST00000377561 TSHZ2Q9NRE2 1034 aa23.94■■□□□ 1.42
CNTNAP3B-203ENST00000377561 HDGFL2Q7Z4V5 671 aaPredicted RBP23.94■■□□□ 1.42
CNTNAP3B-203ENST00000377561 STK26Q9P289 416 aa23.94■■□□□ 1.42
CNTNAP3B-203ENST00000377561 DEKP35659 375 aaKnown RBP23.92■■□□□ 1.42
CNTNAP3B-203ENST00000377561 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
CNTNAP3B-203ENST00000377561 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
CNTNAP3B-203ENST00000377561 MLECQ14165 292 aa23.92■■□□□ 1.42
CNTNAP3B-203ENST00000377561 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
CNTNAP3B-203ENST00000377561 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
CNTNAP3B-203ENST00000377561 PTMAP06454 111 aaKnown RBP23.91■■□□□ 1.42
CNTNAP3B-203ENST00000377561 FGD6Q6ZV73 1430 aa23.9■■□□□ 1.42
CNTNAP3B-203ENST00000377561 LMOD2Q6P5Q4 547 aa23.89■■□□□ 1.42
CNTNAP3B-203ENST00000377561 PHLDB1Q86UU1 1377 aa23.89■■□□□ 1.41
CNTNAP3B-203ENST00000377561 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.41
CNTNAP3B-203ENST00000377561 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
CNTNAP3B-203ENST00000377561 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3B-203ENST00000377561 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
CNTNAP3B-203ENST00000377561 ST20-MTHFSA0A0A6YYL1 179 aa23.88■■□□□ 1.41
CNTNAP3B-203ENST00000377561 LRRC9Q6ZRR7 1453 aa23.88■■□□□ 1.41
CNTNAP3B-203ENST00000377561 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3B-203ENST00000377561 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
CNTNAP3B-203ENST00000377561 CUX1P39880 1505 aa23.87■■□□□ 1.41
CNTNAP3B-203ENST00000377561 MYBBP1AQ9BQG0 1328 aaKnown RBP23.87■■□□□ 1.41
CNTNAP3B-203ENST00000377561 IPO8O15397 1037 aaKnown RBP23.87■■□□□ 1.41
CNTNAP3B-203ENST00000377561 MYOM3Q5VTT5 1437 aa23.86■■□□□ 1.41
CNTNAP3B-203ENST00000377561 GOLGA2Q08379 1002 aa23.85■■□□□ 1.41
CNTNAP3B-203ENST00000377561 TPRNQ4KMQ1 711 aa23.84■■□□□ 1.41
CNTNAP3B-203ENST00000377561 SYNJ1O43426 1573 aa23.83■■□□□ 1.41
CNTNAP3B-203ENST00000377561 HSCBQ8IWL3 235 aa23.83■■□□□ 1.41
CNTNAP3B-203ENST00000377561 PTPRGP23470 1445 aa23.82■■□□□ 1.4
CNTNAP3B-203ENST00000377561 USP47Q96K76 1375 aa23.82■■□□□ 1.4
CNTNAP3B-203ENST00000377561 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
CNTNAP3B-203ENST00000377561 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
CNTNAP3B-203ENST00000377561 CASKIN1Q8WXD9 1431 aa23.8■■□□□ 1.4
CNTNAP3B-203ENST00000377561 RWDD1Q9H446 243 aaPredicted RBP23.8■■□□□ 1.4
CNTNAP3B-203ENST00000377561 NPHP1O15259 732 aa23.79■■□□□ 1.4
CNTNAP3B-203ENST00000377561 SOX12O15370 315 aa23.79■■□□□ 1.4
CNTNAP3B-203ENST00000377561 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
CNTNAP3B-203ENST00000377561 DNTTIP2Q5QJE6 756 aaKnown RBP23.78■■□□□ 1.4
CNTNAP3B-203ENST00000377561 CFAP44Q96MT7 982 aa23.78■■□□□ 1.4
CNTNAP3B-203ENST00000377561 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
CNTNAP3B-203ENST00000377561 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
CNTNAP3B-203ENST00000377561 TULP1O00294 542 aaPredicted RBP23.77■■□□□ 1.4
CNTNAP3B-203ENST00000377561 PANK3Q9H999 370 aa23.76■■□□□ 1.39
CNTNAP3B-203ENST00000377561 RTF1Q92541 710 aaKnown RBP23.76■■□□□ 1.39
CNTNAP3B-203ENST00000377561 TERF2IPQ9NYB0 399 aa23.76■■□□□ 1.39
CNTNAP3B-203ENST00000377561 WASHC2CQ9Y4E1 1318 aa23.75■■□□□ 1.39
CNTNAP3B-203ENST00000377561 RRBP1Q9P2E9 1410 aaKnown RBP23.75■■□□□ 1.39
CNTNAP3B-203ENST00000377561 CFTRP13569 1480 aa23.75■■□□□ 1.39
CNTNAP3B-203ENST00000377561 PMFBP1Q8TBY8 1022 aa23.74■■□□□ 1.39
CNTNAP3B-203ENST00000377561 FGD1P98174 961 aa23.73■■□□□ 1.39
CNTNAP3B-203ENST00000377561 CCDC146Q8IYE0 955 aa23.73■■□□□ 1.39
CNTNAP3B-203ENST00000377561 ITPRIPQ8IWB1 547 aa23.72■■□□□ 1.39
CNTNAP3B-203ENST00000377561 FYCO1Q9BQS8 1478 aa23.72■■□□□ 1.39
CNTNAP3B-203ENST00000377561 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
CNTNAP3B-203ENST00000377561 TAOK2Q9UL54 1235 aa23.7■■□□□ 1.38
CNTNAP3B-203ENST00000377561 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
CNTNAP3B-203ENST00000377561 NAP1L5Q96NT1 182 aaPredicted RBP23.69■■□□□ 1.38
CNTNAP3B-203ENST00000377561 KCNJ4P48050 445 aa23.69■■□□□ 1.38
CNTNAP3B-203ENST00000377561 PRXQ9BXM0 1461 aa23.69■■□□□ 1.38
CNTNAP3B-203ENST00000377561 IPO9Q96P70 1041 aaKnown RBP23.68■■□□□ 1.38
CNTNAP3B-203ENST00000377561 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
CNTNAP3B-203ENST00000377561 PLCB2Q00722 1185 aa23.67■■□□□ 1.38
CNTNAP3B-203ENST00000377561 TRAK1Q9UPV9 953 aa23.67■■□□□ 1.38
CNTNAP3B-203ENST00000377561 MCCP23508 829 aa23.66■■□□□ 1.38
CNTNAP3B-203ENST00000377561 SMC4Q9NTJ3 1288 aa23.66■■□□□ 1.38
CNTNAP3B-203ENST00000377561 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
CNTNAP3B-203ENST00000377561 CCDC7Q96M83 1385 aa23.65■■□□□ 1.38
CNTNAP3B-203ENST00000377561 L1TD1Q5T7N2 865 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms