RNA–Protein interactions for RNA: ENST00000377351.8

UBA1-203, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-203ENST00000377351 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
UBA1-203ENST00000377351 DISP1Q96F81 1524 aa13.23□□□□□ -0.29
UBA1-203ENST00000377351 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
UBA1-203ENST00000377351 EHBP1L1Q8N3D4 1523 aa13.22□□□□□ -0.29
UBA1-203ENST00000377351 KIAA0556O60303 1618 aa13.22□□□□□ -0.29
UBA1-203ENST00000377351 CEP170Q5SW79 1584 aa13.21□□□□□ -0.29
UBA1-203ENST00000377351 SUPT6HQ7KZ85 1726 aaKnown RBP13.21□□□□□ -0.29
UBA1-203ENST00000377351 JPH4Q96JJ6 628 aa13.21□□□□□ -0.29
UBA1-203ENST00000377351 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.21□□□□□ -0.32e-8■■□□□ 13.2
UBA1-203ENST00000377351 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.3
UBA1-203ENST00000377351 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
UBA1-203ENST00000377351 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
UBA1-203ENST00000377351 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
UBA1-203ENST00000377351 NUP160Q12769 1436 aa13.17□□□□□ -0.3
UBA1-203ENST00000377351 FGD1P98174 961 aa13.17□□□□□ -0.3
UBA1-203ENST00000377351 CARMIL2Q6F5E8 1435 aa13.16□□□□□ -0.3
UBA1-203ENST00000377351 NUP153P49790 1475 aaKnown RBP13.14□□□□□ -0.31
UBA1-203ENST00000377351 RAPGEF6Q8TEU7 1601 aa13.14□□□□□ -0.31
UBA1-203ENST00000377351 PTPRKQ15262 1439 aa13.13□□□□□ -0.31
UBA1-203ENST00000377351 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
UBA1-203ENST00000377351 PTPN23Q9H3S7 1636 aa13.12□□□□□ -0.31
UBA1-203ENST00000377351 PLB1Q6P1J6 1458 aa13.12□□□□□ -0.31
UBA1-203ENST00000377351 FANCIQ9NVI1 1328 aa13.12□□□□□ -0.31
UBA1-203ENST00000377351 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
UBA1-203ENST00000377351 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
UBA1-203ENST00000377351 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
UBA1-203ENST00000377351 RRP7BPQ9NSQ0 103 aa13.09□□□□□ -0.31
UBA1-203ENST00000377351 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
UBA1-203ENST00000377351 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
UBA1-203ENST00000377351 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
UBA1-203ENST00000377351 MIA2Q96PC5 1412 aa13.07□□□□□ -0.32
UBA1-203ENST00000377351 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
UBA1-203ENST00000377351 AAMPQ13685 434 aa13.07□□□□□ -0.32
UBA1-203ENST00000377351 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
UBA1-203ENST00000377351 NEFMP07197 916 aa13.06□□□□□ -0.32
UBA1-203ENST00000377351 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
UBA1-203ENST00000377351 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
UBA1-203ENST00000377351 NAIPQ13075 1403 aa13.05□□□□□ -0.32
UBA1-203ENST00000377351 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
UBA1-203ENST00000377351 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
UBA1-203ENST00000377351 CHD1O14646 1710 aa13.04□□□□□ -0.32
UBA1-203ENST00000377351 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
UBA1-203ENST00000377351 PLEKHD1A6NEE1 506 aa13.03□□□□□ -0.32
UBA1-203ENST00000377351 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
UBA1-203ENST00000377351 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
UBA1-203ENST00000377351 PTPRGP23470 1445 aa13.03□□□□□ -0.32
UBA1-203ENST00000377351 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.33
UBA1-203ENST00000377351 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
UBA1-203ENST00000377351 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
UBA1-203ENST00000377351 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
UBA1-203ENST00000377351 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
UBA1-203ENST00000377351 ABCA8O94911 1581 aa12.99□□□□□ -0.33
UBA1-203ENST00000377351 ATP10BO94823 1461 aa12.98□□□□□ -0.33
UBA1-203ENST00000377351 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
UBA1-203ENST00000377351 DAPK1P53355 1430 aa12.97□□□□□ -0.33
UBA1-203ENST00000377351 ANP32AP39687 249 aaKnown RBP12.97□□□□□ -0.33
UBA1-203ENST00000377351 KIF14Q15058 1648 aa12.97□□□□□ -0.33
UBA1-203ENST00000377351 ARID4BQ4LE39 1312 aaPredicted RBP12.96□□□□□ -0.33
UBA1-203ENST00000377351 ABCC5O15440 1437 aa12.96□□□□□ -0.33
UBA1-203ENST00000377351 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
UBA1-203ENST00000377351 DDX10Q13206 875 aaKnown RBP12.96□□□□□ -0.33
UBA1-203ENST00000377351 NAP1L5Q96NT1 182 aaPredicted RBP12.96□□□□□ -0.33
UBA1-203ENST00000377351 GPATCH8Q9UKJ3 1502 aaKnown RBP12.96□□□□□ -0.34
UBA1-203ENST00000377351 AKNAQ7Z591 1439 aa12.94□□□□□ -0.34
UBA1-203ENST00000377351 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
UBA1-203ENST00000377351 TONSLQ96HA7 1378 aa12.93□□□□□ -0.34
UBA1-203ENST00000377351 CAMSAP2Q08AD1 1489 aa12.93□□□□□ -0.34
UBA1-203ENST00000377351 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
UBA1-203ENST00000377351 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
UBA1-203ENST00000377351 DNMT1P26358 1616 aaKnown RBP12.93□□□□□ -0.34
UBA1-203ENST00000377351 ITSN2Q9NZM3 1697 aa12.93□□□□□ -0.34
UBA1-203ENST00000377351 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
UBA1-203ENST00000377351 KDM6BO15054 1643 aa12.92□□□□□ -0.34
UBA1-203ENST00000377351 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
UBA1-203ENST00000377351 ROCK1Q13464 1354 aa12.92□□□□□ -0.34
UBA1-203ENST00000377351 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
UBA1-203ENST00000377351 MPHOSPH9Q99550 1183 aa12.91□□□□□ -0.34
UBA1-203ENST00000377351 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
UBA1-203ENST00000377351 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
UBA1-203ENST00000377351 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
UBA1-203ENST00000377351 AMER1Q5JTC6 1135 aaPredicted RBP12.89□□□□□ -0.35
UBA1-203ENST00000377351 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
UBA1-203ENST00000377351 ABCC10Q5T3U5 1492 aa12.88□□□□□ -0.35
UBA1-203ENST00000377351 FOXD1Q16676 465 aa12.88□□□□□ -0.35
UBA1-203ENST00000377351 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
UBA1-203ENST00000377351 CDC42BPAQ5VT25 1732 aa12.87□□□□□ -0.35
UBA1-203ENST00000377351 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
UBA1-203ENST00000377351 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
UBA1-203ENST00000377351 HIRIP3Q9BW71 556 aaPredicted RBP12.86□□□□□ -0.35
UBA1-203ENST00000377351 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
UBA1-203ENST00000377351 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
UBA1-203ENST00000377351 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBA1-203ENST00000377351 TSPY4P0CV99 314 aa12.85□□□□□ -0.35
UBA1-203ENST00000377351 TSPY10P0CW01 314 aa12.85□□□□□ -0.35
UBA1-203ENST00000377351 ANKRD30AQ9BXX3 1397 aa12.85□□□□□ -0.35
UBA1-203ENST00000377351 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
UBA1-203ENST00000377351 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
UBA1-203ENST00000377351 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
UBA1-203ENST00000377351 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.36
UBA1-203ENST00000377351 ADGBQ8N7X0 1667 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms