RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 MIER1Q8N108 512 aa21.39■■□□□ 1.02
UBA1-202ENST00000377269 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.01
UBA1-202ENST00000377269 WDR7Q9Y4E6 1490 aa21.39■■□□□ 1.01
UBA1-202ENST00000377269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.37■■□□□ 1.01
UBA1-202ENST00000377269 MIA2Q96PC5 1412 aa21.35■■□□□ 1.01
UBA1-202ENST00000377269 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
UBA1-202ENST00000377269 TTC37Q6PGP7 1564 aa21.34■■□□□ 1.01
UBA1-202ENST00000377269 PTPN23Q9H3S7 1636 aa21.34■■□□□ 1.01
UBA1-202ENST00000377269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.31■■□□□ 1
UBA1-202ENST00000377269 PTPRKQ15262 1439 aa21.3■■□□□ 1
UBA1-202ENST00000377269 TCOF1Q13428 1488 aaKnown RBP21.3■■□□□ 1
UBA1-202ENST00000377269 CDC42BPAQ5VT25 1732 aa21.29■■□□□ 1
UBA1-202ENST00000377269 ANP32EQ9BTT0 268 aa21.27■■□□□ 1
UBA1-202ENST00000377269 CHIC2Q9UKJ5 165 aa21.27■□□□□ 0.99
UBA1-202ENST00000377269 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
UBA1-202ENST00000377269 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
UBA1-202ENST00000377269 BCL11AQ9H165 835 aa21.25■□□□□ 0.99
UBA1-202ENST00000377269 ITSN2Q9NZM3 1697 aa21.24■□□□□ 0.99
UBA1-202ENST00000377269 PLCH2O75038 1416 aa21.23■□□□□ 0.99
UBA1-202ENST00000377269 HNRNPMP52272 730 aaKnown RBP eCLIP21.23■□□□□ 0.99
UBA1-202ENST00000377269 ARHGAP5Q13017 1502 aa21.23■□□□□ 0.99
UBA1-202ENST00000377269 MAPKBP1O60336 1514 aa21.22■□□□□ 0.99
UBA1-202ENST00000377269 CDC42BPBQ9Y5S2 1711 aa21.22■□□□□ 0.99
UBA1-202ENST00000377269 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
UBA1-202ENST00000377269 ABCC5O15440 1437 aa21.19■□□□□ 0.98
UBA1-202ENST00000377269 EFCAB2Q5VUJ9 269 aa21.18■□□□□ 0.98
UBA1-202ENST00000377269 SUPT16HQ9Y5B9 1047 aaKnown RBP21.18■□□□□ 0.98
UBA1-202ENST00000377269 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
UBA1-202ENST00000377269 DAPK1P53355 1430 aa21.18■□□□□ 0.98
UBA1-202ENST00000377269 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
UBA1-202ENST00000377269 RRP7BPQ9NSQ0 103 aa21.17■□□□□ 0.98
UBA1-202ENST00000377269 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
UBA1-202ENST00000377269 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
UBA1-202ENST00000377269 CD109Q6YHK3 1445 aa21.16■□□□□ 0.98
UBA1-202ENST00000377269 MBD5Q9P267 1494 aa21.14■□□□□ 0.97
UBA1-202ENST00000377269 TSHZ2Q9NRE2 1034 aa21.14■□□□□ 0.97
UBA1-202ENST00000377269 ARHGEF12Q9NZN5 1544 aa21.12■□□□□ 0.97
UBA1-202ENST00000377269 FANCAO15360 1455 aa21.12■□□□□ 0.97
UBA1-202ENST00000377269 DNMT1P26358 1616 aaKnown RBP21.12■□□□□ 0.97
UBA1-202ENST00000377269 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
UBA1-202ENST00000377269 RAB3GAP2Q9H2M9 1393 aa21.11■□□□□ 0.97
UBA1-202ENST00000377269 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
UBA1-202ENST00000377269 NAIPQ13075 1403 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 ARAP3Q8WWN8 1544 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 AFAP1Q8N556 730 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 HFM1A2PYH4 1435 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
UBA1-202ENST00000377269 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
UBA1-202ENST00000377269 DIP2BQ9P265 1576 aa21.06■□□□□ 0.96
UBA1-202ENST00000377269 TRAPPC8Q9Y2L5 1435 aa21.06■□□□□ 0.96
UBA1-202ENST00000377269 C9orf84Q5VXU9 1444 aa21.04■□□□□ 0.96
UBA1-202ENST00000377269 CCDC141Q6ZP82 1450 aa21.04■□□□□ 0.96
UBA1-202ENST00000377269 ABCC1P33527 1531 aa21.04■□□□□ 0.96
UBA1-202ENST00000377269 NCOA1Q15788 1441 aa21.03■□□□□ 0.96
UBA1-202ENST00000377269 SCAPERQ9BY12 1400 aa21.03■□□□□ 0.96
UBA1-202ENST00000377269 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
UBA1-202ENST00000377269 RSPH4AQ5TD94 716 aa21.02■□□□□ 0.96
UBA1-202ENST00000377269 ADGRL1O94910 1474 aa21.02■□□□□ 0.96
UBA1-202ENST00000377269 GLI2P10070 1586 aa21.02■□□□□ 0.96
UBA1-202ENST00000377269 ARHGEF5Q12774 1597 aa21.02■□□□□ 0.96
UBA1-202ENST00000377269 ROCK1Q13464 1354 aa21.01■□□□□ 0.95
UBA1-202ENST00000377269 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
UBA1-202ENST00000377269 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
UBA1-202ENST00000377269 CROCC2H7BZ55 1655 aa20.98■□□□□ 0.95
UBA1-202ENST00000377269 KDM6BO15054 1643 aa20.97■□□□□ 0.95
UBA1-202ENST00000377269 SHANK2Q9UPX8 1470 aa20.97■□□□□ 0.95
UBA1-202ENST00000377269 RAPGEF3O95398 923 aa20.96■□□□□ 0.95
UBA1-202ENST00000377269 ADGRL2O95490 1459 aa20.96■□□□□ 0.95
UBA1-202ENST00000377269 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
UBA1-202ENST00000377269 SPAG9O60271 1321 aaKnown RBP20.94■□□□□ 0.94
UBA1-202ENST00000377269 KIF15Q9NS87 1388 aa20.93■□□□□ 0.94
UBA1-202ENST00000377269 TSPOAP1O95153 1857 aa20.93■□□□□ 0.94
UBA1-202ENST00000377269 NEO1Q92859 1461 aa20.92■□□□□ 0.94
UBA1-202ENST00000377269 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
UBA1-202ENST00000377269 MYT1LQ9UL68 1186 aa20.92■□□□□ 0.94
UBA1-202ENST00000377269 KIF13AQ9H1H9 1805 aa20.91■□□□□ 0.94
UBA1-202ENST00000377269 TRIM52Q96A61 297 aa20.89■□□□□ 0.94
UBA1-202ENST00000377269 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.93
UBA1-202ENST00000377269 GCC2Q8IWJ2 1684 aa20.89■□□□□ 0.93
UBA1-202ENST00000377269 ADGBQ8N7X0 1667 aa20.88■□□□□ 0.93
UBA1-202ENST00000377269 PPRC1Q5VV67 1664 aaKnown RBP20.88■□□□□ 0.93
UBA1-202ENST00000377269 POGZQ7Z3K3 1410 aa20.88■□□□□ 0.93
UBA1-202ENST00000377269 CFAP74Q9C0B2 1584 aa20.86■□□□□ 0.93
UBA1-202ENST00000377269 MAST1Q9Y2H9 1570 aa20.86■□□□□ 0.93
UBA1-202ENST00000377269 ZNF518AQ6AHZ1 1483 aa20.86■□□□□ 0.93
UBA1-202ENST00000377269 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
UBA1-202ENST00000377269 ZFYVE16Q7Z3T8 1539 aa20.84■□□□□ 0.93
UBA1-202ENST00000377269 RTEL1-TNFRSF6BF6WH68 1400 aa20.83■□□□□ 0.92
UBA1-202ENST00000377269 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
UBA1-202ENST00000377269 ATP7AQ04656 1500 aa20.81■□□□□ 0.92
UBA1-202ENST00000377269 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
UBA1-202ENST00000377269 PLXNC1O60486 1568 aa20.79■□□□□ 0.92
UBA1-202ENST00000377269 INO80Q9ULG1 1556 aaPredicted RBP20.79■□□□□ 0.92
UBA1-202ENST00000377269 KDM5CP41229 1560 aa20.78■□□□□ 0.92
UBA1-202ENST00000377269 FOXD1Q16676 465 aa20.78■□□□□ 0.92
UBA1-202ENST00000377269 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
UBA1-202ENST00000377269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.76■□□□□ 0.913e-6■■■■□ 20.1
UBA1-202ENST00000377269 KIDINS220Q9ULH0 1771 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms