RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
TRIM27-202ENST00000377199 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
TRIM27-202ENST00000377199 C11orf95C9JLR9 678 aaPredicted RBP22.62■■□□□ 1.21
TRIM27-202ENST00000377199 CFDP1Q9UEE9 299 aaPredicted RBP22.62■■□□□ 1.21
TRIM27-202ENST00000377199 DAPK1P53355 1430 aa22.6■■□□□ 1.21
TRIM27-202ENST00000377199 NBPF8Q3BBV2 869 aa22.6■■□□□ 1.21
TRIM27-202ENST00000377199 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
TRIM27-202ENST00000377199 CCDC184Q52MB2 194 aa22.59■■□□□ 1.21
TRIM27-202ENST00000377199 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
TRIM27-202ENST00000377199 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
TRIM27-202ENST00000377199 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.21
TRIM27-202ENST00000377199 ABCC5O15440 1437 aa22.57■■□□□ 1.2
TRIM27-202ENST00000377199 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
TRIM27-202ENST00000377199 GCC2Q8IWJ2 1684 aa22.57■■□□□ 1.2
TRIM27-202ENST00000377199 FAM9BQ8IZU0 186 aa22.57■■□□□ 1.2
TRIM27-202ENST00000377199 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
TRIM27-202ENST00000377199 KIAA0556O60303 1618 aa22.54■■□□□ 1.2
TRIM27-202ENST00000377199 PLB1Q6P1J6 1458 aa22.54■■□□□ 1.2
TRIM27-202ENST00000377199 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
TRIM27-202ENST00000377199 AKNAQ7Z591 1439 aa22.51■■□□□ 1.19
TRIM27-202ENST00000377199 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
TRIM27-202ENST00000377199 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
TRIM27-202ENST00000377199 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
TRIM27-202ENST00000377199 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
TRIM27-202ENST00000377199 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
TRIM27-202ENST00000377199 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
TRIM27-202ENST00000377199 CCDC7Q96M83 1385 aa22.45■■□□□ 1.18
TRIM27-202ENST00000377199 PKD2Q13563 968 aa22.45■■□□□ 1.18
TRIM27-202ENST00000377199 ROCK1Q13464 1354 aa22.45■■□□□ 1.18
TRIM27-202ENST00000377199 CNTLNQ9NXG0 1405 aa22.44■■□□□ 1.18
TRIM27-202ENST00000377199 PRKRIP1Q9H875 184 aaPredicted RBP22.44■■□□□ 1.18
TRIM27-202ENST00000377199 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
TRIM27-202ENST00000377199 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
TRIM27-202ENST00000377199 KIF7Q2M1P5 1343 aa22.42■■□□□ 1.18
TRIM27-202ENST00000377199 CAMSAP2Q08AD1 1489 aa22.42■■□□□ 1.18
TRIM27-202ENST00000377199 DNMT1P26358 1616 aaKnown RBP22.42■■□□□ 1.18
TRIM27-202ENST00000377199 PLEKHD1A6NEE1 506 aa22.4■■□□□ 1.18
TRIM27-202ENST00000377199 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.17
TRIM27-202ENST00000377199 KIF14Q15058 1648 aa22.38■■□□□ 1.17
TRIM27-202ENST00000377199 NCOA1Q15788 1441 aa22.37■■□□□ 1.17
TRIM27-202ENST00000377199 GPATCH8Q9UKJ3 1502 aaKnown RBP22.37■■□□□ 1.17
TRIM27-202ENST00000377199 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
TRIM27-202ENST00000377199 CEP170Q5SW79 1584 aa22.37■■□□□ 1.17
TRIM27-202ENST00000377199 MYT1Q01538 1121 aa22.36■■□□□ 1.17
TRIM27-202ENST00000377199 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
TRIM27-202ENST00000377199 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.17
TRIM27-202ENST00000377199 PZPP20742 1482 aa22.34■■□□□ 1.17
TRIM27-202ENST00000377199 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.17
TRIM27-202ENST00000377199 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
TRIM27-202ENST00000377199 NUP155O75694 1391 aa22.32■■□□□ 1.16
TRIM27-202ENST00000377199 ANKRD30AQ9BXX3 1397 aa22.32■■□□□ 1.16
TRIM27-202ENST00000377199 TSPY4P0CV99 314 aa22.31■■□□□ 1.16
TRIM27-202ENST00000377199 TSPY10P0CW01 314 aa22.31■■□□□ 1.16
TRIM27-202ENST00000377199 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
TRIM27-202ENST00000377199 ANKRD50Q9ULJ7 1429 aa22.29■■□□□ 1.16
TRIM27-202ENST00000377199 USP47Q96K76 1375 aa22.28■■□□□ 1.16
TRIM27-202ENST00000377199 KIAA1107Q9UPP5 1409 aa22.27■■□□□ 1.16
TRIM27-202ENST00000377199 SPATA31E1Q6ZUB1 1445 aa22.25■■□□□ 1.15
TRIM27-202ENST00000377199 CARD11Q9BXL7 1154 aa22.25■■□□□ 1.15
TRIM27-202ENST00000377199 DCAF11Q8TEB1 546 aa22.23■■□□□ 1.15
TRIM27-202ENST00000377199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.154e-8■□□□□ 10.2
TRIM27-202ENST00000377199 ITSN2Q9NZM3 1697 aa22.21■■□□□ 1.15
TRIM27-202ENST00000377199 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
TRIM27-202ENST00000377199 RGL3Q3MIN7 710 aa22.2■■□□□ 1.15
TRIM27-202ENST00000377199 ATP10BO94823 1461 aa22.2■■□□□ 1.14
TRIM27-202ENST00000377199 B4GALNT3Q6L9W6 998 aa22.2■■□□□ 1.14
TRIM27-202ENST00000377199 ANP32EQ9BTT0 268 aa22.18■■□□□ 1.14
TRIM27-202ENST00000377199 NUP160Q12769 1436 aa22.17■■□□□ 1.14
TRIM27-202ENST00000377199 KIF15Q9NS87 1388 aa22.17■■□□□ 1.14
TRIM27-202ENST00000377199 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
TRIM27-202ENST00000377199 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
TRIM27-202ENST00000377199 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.13
TRIM27-202ENST00000377199 PTPRGP23470 1445 aa22.13■■□□□ 1.13
TRIM27-202ENST00000377199 ADGRL2O95490 1459 aa22.13■■□□□ 1.13
TRIM27-202ENST00000377199 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
TRIM27-202ENST00000377199 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
TRIM27-202ENST00000377199 DHX29Q7Z478 1369 aaKnown RBP22.1■■□□□ 1.13
TRIM27-202ENST00000377199 BCORL1Q5H9F3 1711 aa22.1■■□□□ 1.13
TRIM27-202ENST00000377199 PPP4R2Q9NY27 417 aa22.1■■□□□ 1.13
TRIM27-202ENST00000377199 CDC42BPAQ5VT25 1732 aa22.09■■□□□ 1.13
TRIM27-202ENST00000377199 MBD5Q9P267 1494 aa22.09■■□□□ 1.13
TRIM27-202ENST00000377199 ABCC10Q5T3U5 1492 aa22.08■■□□□ 1.13
TRIM27-202ENST00000377199 CROCC2H7BZ55 1655 aa22.08■■□□□ 1.13
TRIM27-202ENST00000377199 ADCY10Q96PN6 1610 aa22.08■■□□□ 1.12
TRIM27-202ENST00000377199 ABCA8O94911 1581 aa22.06■■□□□ 1.12
TRIM27-202ENST00000377199 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
TRIM27-202ENST00000377199 NBPF1Q3BBV0 1214 aa22.02■■□□□ 1.12
TRIM27-202ENST00000377199 KDM5CP41229 1560 aa22■■□□□ 1.11
TRIM27-202ENST00000377199 MSH5O43196 834 aa21.99■■□□□ 1.11
TRIM27-202ENST00000377199 PNISRQ8TF01 805 aaKnown RBP21.97■■□□□ 1.11
TRIM27-202ENST00000377199 RALGAPBQ86X10 1494 aa21.97■■□□□ 1.11
TRIM27-202ENST00000377199 SHANK2Q9UPX8 1470 aa21.97■■□□□ 1.11
TRIM27-202ENST00000377199 CCDC144AA2RUR9 1427 aa21.96■■□□□ 1.11
TRIM27-202ENST00000377199 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
TRIM27-202ENST00000377199 NUDCQ9Y266 331 aa21.96■■□□□ 1.11
TRIM27-202ENST00000377199 POLR1AO95602 1720 aaPredicted RBP21.95■■□□□ 1.1
TRIM27-202ENST00000377199 ARHGAP5Q13017 1502 aa21.94■■□□□ 1.1
TRIM27-202ENST00000377199 UHRF1BP1Q6BDS2 1440 aa21.93■■□□□ 1.1
TRIM27-202ENST00000377199 SYCP2Q9BX26 1530 aa21.93■■□□□ 1.1
TRIM27-202ENST00000377199 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms