RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 ARXQ96QS3 562 aa15.75■□□□□ 0.11
TM9SF2-201ENST00000376387 KDM6BO15054 1643 aa15.74■□□□□ 0.11
TM9SF2-201ENST00000376387 FMN1Q68DA7 1419 aa15.74■□□□□ 0.11
TM9SF2-201ENST00000376387 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
TM9SF2-201ENST00000376387 MYOM3Q5VTT5 1437 aa15.73■□□□□ 0.11
TM9SF2-201ENST00000376387 SENP3-EIF4A1A0A087X0R7 540 aa15.73■□□□□ 0.11
TM9SF2-201ENST00000376387 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
TM9SF2-201ENST00000376387 L3MBTL2Q969R5 705 aa15.72■□□□□ 0.11
TM9SF2-201ENST00000376387 CNGB1Q14028 1251 aaPredicted RBP15.72■□□□□ 0.11
TM9SF2-201ENST00000376387 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
TM9SF2-201ENST00000376387 BCL11BQ9C0K0 894 aaPredicted RBP15.72■□□□□ 0.11
TM9SF2-201ENST00000376387 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
TM9SF2-201ENST00000376387 CCDC7Q96M83 1385 aa15.71■□□□□ 0.11
TM9SF2-201ENST00000376387 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.1
TM9SF2-201ENST00000376387 NCOA1Q15788 1441 aa15.69■□□□□ 0.1
TM9SF2-201ENST00000376387 AKNAQ7Z591 1439 aa15.69■□□□□ 0.1
TM9SF2-201ENST00000376387 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
TM9SF2-201ENST00000376387 NBPF8Q3BBV2 869 aa15.68■□□□□ 0.1
TM9SF2-201ENST00000376387 DHX37Q8IY37 1157 aaKnown RBP15.68■□□□□ 0.1
TM9SF2-201ENST00000376387 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
TM9SF2-201ENST00000376387 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
TM9SF2-201ENST00000376387 MPHOSPH9Q99550 1183 aa15.67■□□□□ 0.1
TM9SF2-201ENST00000376387 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
TM9SF2-201ENST00000376387 HECW1Q76N89 1606 aa15.66■□□□□ 0.1
TM9SF2-201ENST00000376387 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
TM9SF2-201ENST00000376387 KIF7Q2M1P5 1343 aa15.65■□□□□ 0.1
TM9SF2-201ENST00000376387 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
TM9SF2-201ENST00000376387 UGGT2Q9NYU1 1516 aa15.63■□□□□ 0.09
TM9SF2-201ENST00000376387 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
TM9SF2-201ENST00000376387 GCC2Q8IWJ2 1684 aa15.63■□□□□ 0.09
TM9SF2-201ENST00000376387 CUL7Q14999 1698 aa15.63■□□□□ 0.09
TM9SF2-201ENST00000376387 SAMD9Q5K651 1589 aa15.62■□□□□ 0.09
TM9SF2-201ENST00000376387 EHBP1L1Q8N3D4 1523 aa15.61■□□□□ 0.09
TM9SF2-201ENST00000376387 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
TM9SF2-201ENST00000376387 ARHGEF11O15085 1522 aa15.59■□□□□ 0.09
TM9SF2-201ENST00000376387 ABCA5Q8WWZ7 1642 aa15.59■□□□□ 0.09
TM9SF2-201ENST00000376387 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.08
TM9SF2-201ENST00000376387 SMG6Q86US8 1419 aaKnown RBP15.58■□□□□ 0.08
TM9SF2-201ENST00000376387 SPATA31E1Q6ZUB1 1445 aa15.57■□□□□ 0.08
TM9SF2-201ENST00000376387 WDR62O43379 1518 aa15.57■□□□□ 0.08
TM9SF2-201ENST00000376387 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
TM9SF2-201ENST00000376387 TCOF1Q13428 1488 aaKnown RBP15.56■□□□□ 0.08
TM9SF2-201ENST00000376387 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
TM9SF2-201ENST00000376387 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
TM9SF2-201ENST00000376387 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
TM9SF2-201ENST00000376387 TEX14Q8IWB6 1497 aa15.55■□□□□ 0.08
TM9SF2-201ENST00000376387 ANKRD30BQ9BXX2 1392 aa15.54■□□□□ 0.08
TM9SF2-201ENST00000376387 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
TM9SF2-201ENST00000376387 RPRD2Q5VT52 1461 aaKnown RBP15.53■□□□□ 0.08
TM9SF2-201ENST00000376387 RNF123Q5XPI4 1314 aa15.53■□□□□ 0.08
TM9SF2-201ENST00000376387 ANP32AP39687 249 aaKnown RBP15.53■□□□□ 0.08
TM9SF2-201ENST00000376387 POLR1AO95602 1720 aaPredicted RBP15.52■□□□□ 0.08
TM9SF2-201ENST00000376387 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.08
TM9SF2-201ENST00000376387 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
TM9SF2-201ENST00000376387 ZBTB47Q9UFB7 747 aaPredicted RBP15.51■□□□□ 0.07
TM9SF2-201ENST00000376387 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
TM9SF2-201ENST00000376387 BCORL1Q5H9F3 1711 aa15.5■□□□□ 0.07
TM9SF2-201ENST00000376387 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
TM9SF2-201ENST00000376387 ZNF326Q5BKZ1 582 aaKnown RBP15.48■□□□□ 0.07
TM9SF2-201ENST00000376387 NPM2Q86SE8 214 aaKnown RBP15.48■□□□□ 0.07
TM9SF2-201ENST00000376387 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
TM9SF2-201ENST00000376387 ZNF644Q9H582 1327 aaPredicted RBP15.47■□□□□ 0.07
TM9SF2-201ENST00000376387 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
TM9SF2-201ENST00000376387 RTL5Q5HYW3 569 aaPredicted RBP15.46■□□□□ 0.06
TM9SF2-201ENST00000376387 IL27Q8NEV9 243 aa15.46■□□□□ 0.06
TM9SF2-201ENST00000376387 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.06
TM9SF2-201ENST00000376387 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
TM9SF2-201ENST00000376387 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
TM9SF2-201ENST00000376387 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
TM9SF2-201ENST00000376387 DAPK1P53355 1430 aa15.43■□□□□ 0.06
TM9SF2-201ENST00000376387 USP47Q96K76 1375 aa15.43■□□□□ 0.06
TM9SF2-201ENST00000376387 MIA2Q96PC5 1412 aa15.42■□□□□ 0.06
TM9SF2-201ENST00000376387 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
TM9SF2-201ENST00000376387 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
TM9SF2-201ENST00000376387 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
TM9SF2-201ENST00000376387 ABCC5O15440 1437 aa15.41■□□□□ 0.06
TM9SF2-201ENST00000376387 TMC1Q8TDI8 760 aa15.41■□□□□ 0.06
TM9SF2-201ENST00000376387 HOMEZQ8IX15 550 aa15.4■□□□□ 0.06
TM9SF2-201ENST00000376387 SKAP1Q86WV1 359 aa15.38■□□□□ 0.05
TM9SF2-201ENST00000376387 PZPP20742 1482 aa15.38■□□□□ 0.05
TM9SF2-201ENST00000376387 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
TM9SF2-201ENST00000376387 ADAMTS12P58397 1594 aa15.37■□□□□ 0.05
TM9SF2-201ENST00000376387 ROCK1Q13464 1354 aa15.37■□□□□ 0.05
TM9SF2-201ENST00000376387 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
TM9SF2-201ENST00000376387 PAXIP1Q6ZW49 1069 aaPredicted RBP15.37■□□□□ 0.05
TM9SF2-201ENST00000376387 FGD1P98174 961 aa15.36■□□□□ 0.05
TM9SF2-201ENST00000376387 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
TM9SF2-201ENST00000376387 KDM5CP41229 1560 aa15.36■□□□□ 0.05
TM9SF2-201ENST00000376387 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
TM9SF2-201ENST00000376387 PDE4AP27815 886 aa15.36■□□□□ 0.05
TM9SF2-201ENST00000376387 NEFMP07197 916 aa15.35■□□□□ 0.05
TM9SF2-201ENST00000376387 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
TM9SF2-201ENST00000376387 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
TM9SF2-201ENST00000376387 BACH2Q9BYV9 841 aa15.31■□□□□ 0.04
TM9SF2-201ENST00000376387 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
TM9SF2-201ENST00000376387 PKD2Q13563 968 aa15.31■□□□□ 0.04
TM9SF2-201ENST00000376387 KIF14Q15058 1648 aa15.31■□□□□ 0.04
TM9SF2-201ENST00000376387 TCERG1O14776 1098 aaKnown RBP15.3■□□□□ 0.04
TM9SF2-201ENST00000376387 PLIN1O60240 522 aa15.3■□□□□ 0.04
TM9SF2-201ENST00000376387 CDCA7LQ96GN5 454 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms