RNA–Protein interactions for RNA: ENST00000374907.7

ITGAV-202, Transcript of integrin subunit alpha V, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGAV, Length 6,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-202ENST00000374907 FRAT2O75474 233 aaPredicted RBP21.01■□□□□ 0.95
ITGAV-202ENST00000374907 CHAF1AQ13111 956 aaPredicted RBP21■□□□□ 0.95
ITGAV-202ENST00000374907 DCAF8L1A6NGE4 600 aa20.99■□□□□ 0.95
ITGAV-202ENST00000374907 FBXO3Q9UK99 471 aa20.99■□□□□ 0.95
ITGAV-202ENST00000374907 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
ITGAV-202ENST00000374907 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
ITGAV-202ENST00000374907 SPRYD3Q8NCJ5 442 aa20.97■□□□□ 0.95
ITGAV-202ENST00000374907 L1TD1Q5T7N2 865 aaKnown RBP20.97■□□□□ 0.95
ITGAV-202ENST00000374907 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
ITGAV-202ENST00000374907 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
ITGAV-202ENST00000374907 MS4A1P11836 297 aa20.95■□□□□ 0.94
ITGAV-202ENST00000374907 KIAA1211Q6ZU35 1233 aa20.94■□□□□ 0.94
ITGAV-202ENST00000374907 HDGFL2Q7Z4V5 671 aaPredicted RBP20.94■□□□□ 0.94
ITGAV-202ENST00000374907 NAP1L5Q96NT1 182 aaPredicted RBP20.93■□□□□ 0.94
ITGAV-202ENST00000374907 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
ITGAV-202ENST00000374907 CREBRFQ8IUR6 639 aa20.93■□□□□ 0.94
ITGAV-202ENST00000374907 RASSF8Q8NHQ8 419 aa20.93■□□□□ 0.94
ITGAV-202ENST00000374907 MARCH6O60337 910 aa20.92■□□□□ 0.94
ITGAV-202ENST00000374907 CWC22Q9HCG8 908 aaKnown RBP20.91■□□□□ 0.94
ITGAV-202ENST00000374907 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
ITGAV-202ENST00000374907 RAD21O60216 631 aa20.89■□□□□ 0.93
ITGAV-202ENST00000374907 DCAF11Q8TEB1 546 aa20.89■□□□□ 0.93
ITGAV-202ENST00000374907 EVA1CP58658 441 aa20.89■□□□□ 0.93
ITGAV-202ENST00000374907 TMF1P82094 1093 aa20.88■□□□□ 0.93
ITGAV-202ENST00000374907 TOMM22Q9NS69 142 aa20.88■□□□□ 0.93
ITGAV-202ENST00000374907 A0A0U1RQG5 324 aaPredicted RBP20.88■□□□□ 0.93
ITGAV-202ENST00000374907 LTV1Q96GA3 475 aaPredicted RBP20.88■□□□□ 0.93
ITGAV-202ENST00000374907 HSCBQ8IWL3 235 aa20.87■□□□□ 0.93
ITGAV-202ENST00000374907 CTDP1Q9Y5B0 961 aaPredicted RBP20.87■□□□□ 0.93
ITGAV-202ENST00000374907 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
ITGAV-202ENST00000374907 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
ITGAV-202ENST00000374907 NUTM2FA1L443 756 aa20.84■□□□□ 0.93
ITGAV-202ENST00000374907 TRIM34Q9BYJ4 488 aa20.83■□□□□ 0.92
ITGAV-202ENST00000374907 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
ITGAV-202ENST00000374907 NGDNQ8NEJ9 315 aaKnown RBP20.82■□□□□ 0.92
ITGAV-202ENST00000374907 CLIP1P30622 1438 aa20.81■□□□□ 0.92
ITGAV-202ENST00000374907 CEP89Q96ST8 783 aa20.81■□□□□ 0.92
ITGAV-202ENST00000374907 TCEAL9Q9UHQ7 104 aa20.81■□□□□ 0.92
ITGAV-202ENST00000374907 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
ITGAV-202ENST00000374907 MIER1Q8N108 512 aa20.8■□□□□ 0.92
ITGAV-202ENST00000374907 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
ITGAV-202ENST00000374907 GPATCH3Q96I76 525 aa20.76■□□□□ 0.91
ITGAV-202ENST00000374907 SPAG9O60271 1321 aaKnown RBP20.76■□□□□ 0.91
ITGAV-202ENST00000374907 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
ITGAV-202ENST00000374907 TRIM6-TRIM34B2RNG4 842 aa20.73■□□□□ 0.91
ITGAV-202ENST00000374907 AMPHP49418 695 aa20.73■□□□□ 0.91
ITGAV-202ENST00000374907 STK31Q9BXU1 1019 aa20.73■□□□□ 0.91
ITGAV-202ENST00000374907 SLC4A10Q6U841 1118 aa20.73■□□□□ 0.91
ITGAV-202ENST00000374907 SYTL4Q96C24 671 aaPredicted RBP20.72■□□□□ 0.91
ITGAV-202ENST00000374907 RTN4Q9NQC3 1192 aaKnown RBP20.72■□□□□ 0.91
ITGAV-202ENST00000374907 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
ITGAV-202ENST00000374907 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
ITGAV-202ENST00000374907 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
ITGAV-202ENST00000374907 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.94e-6■■■■□ 21.8
ITGAV-202ENST00000374907 MSNP26038 577 aaKnown RBP20.69■□□□□ 0.9
ITGAV-202ENST00000374907 TPM4P67936 248 aa20.69■□□□□ 0.9
ITGAV-202ENST00000374907 PES1O00541 588 aaKnown RBP20.68■□□□□ 0.9
ITGAV-202ENST00000374907 IPO8O15397 1037 aaKnown RBP20.66■□□□□ 0.9
ITGAV-202ENST00000374907 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
ITGAV-202ENST00000374907 NOL10Q9BSC4 688 aaKnown RBP20.66■□□□□ 0.9
ITGAV-202ENST00000374907 HTATSF1O43719 755 aaKnown RBP20.66■□□□□ 0.9
ITGAV-202ENST00000374907 CALD1Q05682 793 aaKnown RBP20.65■□□□□ 0.9
ITGAV-202ENST00000374907 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
ITGAV-202ENST00000374907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.64■□□□□ 0.89
ITGAV-202ENST00000374907 CCDC34Q96HJ3 373 aa20.64■□□□□ 0.89
ITGAV-202ENST00000374907 SIN3AQ96ST3 1273 aa20.63■□□□□ 0.89
ITGAV-202ENST00000374907 PPP1R1BQ9UD71 204 aaPredicted RBP20.63■□□□□ 0.89
ITGAV-202ENST00000374907 CFAP44Q96MT7 982 aa20.62■□□□□ 0.89
ITGAV-202ENST00000374907 AMOTL1Q8IY63 956 aa20.6■□□□□ 0.89
ITGAV-202ENST00000374907 ARID3AQ99856 593 aa20.59■□□□□ 0.89
ITGAV-202ENST00000374907 C1orf141Q5JVX7 400 aa20.57■□□□□ 0.88
ITGAV-202ENST00000374907 TPD52L1Q16890 204 aaPredicted RBP20.57■□□□□ 0.88
ITGAV-202ENST00000374907 DHX16O60231 1041 aaKnown RBP20.56■□□□□ 0.88
ITGAV-202ENST00000374907 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
ITGAV-202ENST00000374907 CHMP4AQ9BY43 222 aa20.56■□□□□ 0.88
ITGAV-202ENST00000374907 VPS37DQ86XT2 251 aa20.55■□□□□ 0.88
ITGAV-202ENST00000374907 AKAP17AQ02040 695 aaKnown RBP20.54■□□□□ 0.88
ITGAV-202ENST00000374907 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
ITGAV-202ENST00000374907 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.88
ITGAV-202ENST00000374907 KIF3BO15066 747 aa20.51■□□□□ 0.87
ITGAV-202ENST00000374907 SF3A1Q15459 793 aaKnown RBP20.51■□□□□ 0.87
ITGAV-202ENST00000374907 WASHC2CQ9Y4E1 1318 aa20.51■□□□□ 0.87
ITGAV-202ENST00000374907 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
ITGAV-202ENST00000374907 GOLGA6L1Q8N7Z2 621 aa20.5■□□□□ 0.87
ITGAV-202ENST00000374907 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
ITGAV-202ENST00000374907 FOXD1Q16676 465 aa20.49■□□□□ 0.87
ITGAV-202ENST00000374907 TPM3P06753 285 aa20.49■□□□□ 0.87
ITGAV-202ENST00000374907 CCDC43Q96MW1 224 aaKnown RBP20.49■□□□□ 0.87
ITGAV-202ENST00000374907 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.48■□□□□ 0.87
ITGAV-202ENST00000374907 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
ITGAV-202ENST00000374907 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
ITGAV-202ENST00000374907 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
ITGAV-202ENST00000374907 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
ITGAV-202ENST00000374907 FOXD4L1Q9NU39 408 aa20.48■□□□□ 0.87
ITGAV-202ENST00000374907 GZF1Q9H116 711 aaPredicted RBP20.48■□□□□ 0.87
ITGAV-202ENST00000374907 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
ITGAV-202ENST00000374907 HMMRO75330 724 aa20.47■□□□□ 0.87
ITGAV-202ENST00000374907 SF3B2Q13435 895 aaKnown RBP20.46■□□□□ 0.87
ITGAV-202ENST00000374907 FOXD4L5Q5VV16 416 aaPredicted RBP20.46■□□□□ 0.87
ITGAV-202ENST00000374907 FOXD4L4Q8WXT5 416 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms