RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 PDE4CQ08493 712 aa16.56■□□□□ 0.24
SLC44A1-202ENST00000374723 AMER1Q5JTC6 1135 aaPredicted RBP16.55■□□□□ 0.24
SLC44A1-202ENST00000374723 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
SLC44A1-202ENST00000374723 STK26Q9P289 416 aa16.55■□□□□ 0.24
SLC44A1-202ENST00000374723 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
SLC44A1-202ENST00000374723 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
SLC44A1-202ENST00000374723 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
SLC44A1-202ENST00000374723 DCAF11Q8TEB1 546 aa16.53■□□□□ 0.24
SLC44A1-202ENST00000374723 NOP58Q9Y2X3 529 aaKnown RBP16.53■□□□□ 0.24
SLC44A1-202ENST00000374723 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
SLC44A1-202ENST00000374723 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
SLC44A1-202ENST00000374723 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
SLC44A1-202ENST00000374723 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
SLC44A1-202ENST00000374723 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
SLC44A1-202ENST00000374723 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
SLC44A1-202ENST00000374723 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
SLC44A1-202ENST00000374723 HSP90B1P14625 803 aaKnown RBP16.48■□□□□ 0.23
SLC44A1-202ENST00000374723 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
SLC44A1-202ENST00000374723 TPM4P67936 248 aa16.48■□□□□ 0.23
SLC44A1-202ENST00000374723 IPO8O15397 1037 aaKnown RBP16.47■□□□□ 0.23
SLC44A1-202ENST00000374723 RASSF8Q8NHQ8 419 aa16.47■□□□□ 0.23
SLC44A1-202ENST00000374723 VPS53Q5VIR6 699 aa16.47■□□□□ 0.23
SLC44A1-202ENST00000374723 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
SLC44A1-202ENST00000374723 CALD1Q05682 793 aaKnown RBP16.45■□□□□ 0.22
SLC44A1-202ENST00000374723 CREBRFQ8IUR6 639 aa16.45■□□□□ 0.22
SLC44A1-202ENST00000374723 CCDC34Q96HJ3 373 aa16.45■□□□□ 0.22
SLC44A1-202ENST00000374723 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
SLC44A1-202ENST00000374723 GGT6Q6P531 493 aa16.44■□□□□ 0.22
SLC44A1-202ENST00000374723 KRI1Q8N9T8 703 aaKnown RBP16.44■□□□□ 0.22
SLC44A1-202ENST00000374723 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
SLC44A1-202ENST00000374723 SPAG9O60271 1321 aaKnown RBP16.43■□□□□ 0.22
SLC44A1-202ENST00000374723 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
SLC44A1-202ENST00000374723 CEP89Q96ST8 783 aa16.43■□□□□ 0.22
SLC44A1-202ENST00000374723 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
SLC44A1-202ENST00000374723 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
SLC44A1-202ENST00000374723 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
SLC44A1-202ENST00000374723 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
SLC44A1-202ENST00000374723 TRIM6-TRIM34B2RNG4 842 aa16.41■□□□□ 0.22
SLC44A1-202ENST00000374723 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
SLC44A1-202ENST00000374723 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
SLC44A1-202ENST00000374723 PTMSP20962 102 aa16.4■□□□□ 0.22
SLC44A1-202ENST00000374723 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
SLC44A1-202ENST00000374723 MARCH6O60337 910 aa16.39■□□□□ 0.21
SLC44A1-202ENST00000374723 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
SLC44A1-202ENST00000374723 GOLGA6L1Q8N7Z2 621 aa16.39■□□□□ 0.21
SLC44A1-202ENST00000374723 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
SLC44A1-202ENST00000374723 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
SLC44A1-202ENST00000374723 EEA1Q15075 1411 aa16.37■□□□□ 0.21
SLC44A1-202ENST00000374723 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
SLC44A1-202ENST00000374723 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
SLC44A1-202ENST00000374723 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
SLC44A1-202ENST00000374723 ARID3AQ99856 593 aa16.36■□□□□ 0.21
SLC44A1-202ENST00000374723 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
SLC44A1-202ENST00000374723 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
SLC44A1-202ENST00000374723 GZF1Q9H116 711 aaPredicted RBP16.34■□□□□ 0.21
SLC44A1-202ENST00000374723 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.21
SLC44A1-202ENST00000374723 CSPP1Q1MSJ5 1256 aa16.32■□□□□ 0.2
SLC44A1-202ENST00000374723 SLC4A10Q6U841 1118 aa16.32■□□□□ 0.2
SLC44A1-202ENST00000374723 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
SLC44A1-202ENST00000374723 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
SLC44A1-202ENST00000374723 WRNQ14191 1432 aaPredicted RBP eCLIP16.32■□□□□ 0.2
SLC44A1-202ENST00000374723 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
SLC44A1-202ENST00000374723 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
SLC44A1-202ENST00000374723 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
SLC44A1-202ENST00000374723 ROCK2O75116 1388 aaKnown RBP16.31■□□□□ 0.2
SLC44A1-202ENST00000374723 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
SLC44A1-202ENST00000374723 MSH5O43196 834 aa16.3■□□□□ 0.2
SLC44A1-202ENST00000374723 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
SLC44A1-202ENST00000374723 HMMRO75330 724 aa16.29■□□□□ 0.2
SLC44A1-202ENST00000374723 TPM3P06753 285 aa16.29■□□□□ 0.2
SLC44A1-202ENST00000374723 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
SLC44A1-202ENST00000374723 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
SLC44A1-202ENST00000374723 TNNT3P45378 269 aaPredicted RBP16.29■□□□□ 0.2
SLC44A1-202ENST00000374723 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
SLC44A1-202ENST00000374723 AMPHP49418 695 aa16.28■□□□□ 0.2
SLC44A1-202ENST00000374723 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
SLC44A1-202ENST00000374723 NOL8Q76FK4 1167 aaKnown RBP16.28■□□□□ 0.2
SLC44A1-202ENST00000374723 LTV1Q96GA3 475 aaPredicted RBP16.28■□□□□ 0.2
SLC44A1-202ENST00000374723 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
SLC44A1-202ENST00000374723 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
SLC44A1-202ENST00000374723 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
SLC44A1-202ENST00000374723 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
SLC44A1-202ENST00000374723 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
SLC44A1-202ENST00000374723 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
SLC44A1-202ENST00000374723 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
SLC44A1-202ENST00000374723 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
SLC44A1-202ENST00000374723 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
SLC44A1-202ENST00000374723 RAD21O60216 631 aa16.25■□□□□ 0.19
SLC44A1-202ENST00000374723 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
SLC44A1-202ENST00000374723 EVA1CP58658 441 aa16.24■□□□□ 0.19
SLC44A1-202ENST00000374723 TSR1Q2NL82 804 aaKnown RBP16.24■□□□□ 0.19
SLC44A1-202ENST00000374723 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
SLC44A1-202ENST00000374723 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
SLC44A1-202ENST00000374723 AKAP17AQ02040 695 aaKnown RBP16.22■□□□□ 0.19
SLC44A1-202ENST00000374723 PHF14O94880 888 aa16.22■□□□□ 0.19
SLC44A1-202ENST00000374723 ARHGAP35Q9NRY4 1499 aa16.21■□□□□ 0.19
SLC44A1-202ENST00000374723 PKD2Q13563 968 aa16.21■□□□□ 0.19
SLC44A1-202ENST00000374723 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
SLC44A1-202ENST00000374723 H3BQV1 296 aa16.21■□□□□ 0.19
SLC44A1-202ENST00000374723 IFFO2Q5TF58 517 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms