RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
RXRB-201ENST00000374680 WDR62O43379 1518 aa23.84■■□□□ 1.41
RXRB-201ENST00000374680 DISP1Q96F81 1524 aa23.84■■□□□ 1.41
RXRB-201ENST00000374680 PLB1Q6P1J6 1458 aa23.84■■□□□ 1.41
RXRB-201ENST00000374680 KIAA0586Q9BVV6 1533 aa23.83■■□□□ 1.41
RXRB-201ENST00000374680 CCER2I3L3R5 266 aa23.82■■□□□ 1.4
RXRB-201ENST00000374680 NUP153P49790 1475 aaKnown RBP23.82■■□□□ 1.4
RXRB-201ENST00000374680 IRX6P78412 446 aaPredicted RBP23.81■■□□□ 1.4
RXRB-201ENST00000374680 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
RXRB-201ENST00000374680 CCDC184Q52MB2 194 aa23.8■■□□□ 1.4
RXRB-201ENST00000374680 ABCC5O15440 1437 aa23.8■■□□□ 1.4
RXRB-201ENST00000374680 SENP3-EIF4A1A0A087X0R7 540 aa23.8■■□□□ 1.4
RXRB-201ENST00000374680 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
RXRB-201ENST00000374680 DAPK1P53355 1430 aa23.79■■□□□ 1.4
RXRB-201ENST00000374680 MIA2Q96PC5 1412 aa23.79■■□□□ 1.4
RXRB-201ENST00000374680 NEFLP07196 543 aa23.78■■□□□ 1.4
RXRB-201ENST00000374680 FAM9BQ8IZU0 186 aa23.76■■□□□ 1.39
RXRB-201ENST00000374680 KDM5BQ9UGL1 1544 aa23.74■■□□□ 1.39
RXRB-201ENST00000374680 PLEKHD1A6NEE1 506 aa23.74■■□□□ 1.39
RXRB-201ENST00000374680 KIAA0556O60303 1618 aa23.73■■□□□ 1.39
RXRB-201ENST00000374680 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
RXRB-201ENST00000374680 PKD2Q13563 968 aa23.72■■□□□ 1.39
RXRB-201ENST00000374680 TSHZ2Q9NRE2 1034 aa23.71■■□□□ 1.39
RXRB-201ENST00000374680 KDM2AQ9Y2K7 1162 aa23.7■■□□□ 1.38
RXRB-201ENST00000374680 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.38
RXRB-201ENST00000374680 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
RXRB-201ENST00000374680 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
RXRB-201ENST00000374680 TROQ12816 1431 aaPredicted RBP23.65■■□□□ 1.38
RXRB-201ENST00000374680 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
RXRB-201ENST00000374680 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
RXRB-201ENST00000374680 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
RXRB-201ENST00000374680 GCC2Q8IWJ2 1684 aa23.6■■□□□ 1.37
RXRB-201ENST00000374680 GPATCH8Q9UKJ3 1502 aaKnown RBP23.6■■□□□ 1.37
RXRB-201ENST00000374680 TSPY4P0CV99 314 aa23.6■■□□□ 1.37
RXRB-201ENST00000374680 TSPY10P0CW01 314 aa23.6■■□□□ 1.37
RXRB-201ENST00000374680 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
RXRB-201ENST00000374680 CAMSAP2Q08AD1 1489 aa23.59■■□□□ 1.37
RXRB-201ENST00000374680 AKNAQ7Z591 1439 aa23.59■■□□□ 1.37
RXRB-201ENST00000374680 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
RXRB-201ENST00000374680 KIF7Q2M1P5 1343 aa23.58■■□□□ 1.37
RXRB-201ENST00000374680 CCDC7Q96M83 1385 aa23.58■■□□□ 1.36
RXRB-201ENST00000374680 NCOA1Q15788 1441 aa23.58■■□□□ 1.36
RXRB-201ENST00000374680 MYT1Q01538 1121 aa23.57■■□□□ 1.36
RXRB-201ENST00000374680 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
RXRB-201ENST00000374680 KIF14Q15058 1648 aa23.57■■□□□ 1.36
RXRB-201ENST00000374680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.57■■□□□ 1.361e-7■□□□□ 10.6
RXRB-201ENST00000374680 NUP155O75694 1391 aa23.56■■□□□ 1.36
RXRB-201ENST00000374680 RPRD2Q5VT52 1461 aaKnown RBP23.54■■□□□ 1.36
RXRB-201ENST00000374680 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
RXRB-201ENST00000374680 DNMT1P26358 1616 aaKnown RBP23.52■■□□□ 1.36
RXRB-201ENST00000374680 ANKRD30AQ9BXX3 1397 aa23.52■■□□□ 1.36
RXRB-201ENST00000374680 RGL3Q3MIN7 710 aa23.52■■□□□ 1.36
RXRB-201ENST00000374680 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
RXRB-201ENST00000374680 ANKRD50Q9ULJ7 1429 aa23.49■■□□□ 1.35
RXRB-201ENST00000374680 PZPP20742 1482 aa23.49■■□□□ 1.35
RXRB-201ENST00000374680 DCAF11Q8TEB1 546 aa23.49■■□□□ 1.35
RXRB-201ENST00000374680 ATP10BO94823 1461 aa23.48■■□□□ 1.35
RXRB-201ENST00000374680 CARD11Q9BXL7 1154 aa23.46■■□□□ 1.35
RXRB-201ENST00000374680 PTPRGP23470 1445 aa23.46■■□□□ 1.35
RXRB-201ENST00000374680 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
RXRB-201ENST00000374680 NUP160Q12769 1436 aa23.42■■□□□ 1.34
RXRB-201ENST00000374680 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
RXRB-201ENST00000374680 USP47Q96K76 1375 aa23.42■■□□□ 1.34
RXRB-201ENST00000374680 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
RXRB-201ENST00000374680 ST20-MTHFSA0A0A6YYL1 179 aa23.39■■□□□ 1.33
RXRB-201ENST00000374680 KIF15Q9NS87 1388 aa23.38■■□□□ 1.33
RXRB-201ENST00000374680 SPATA31E1Q6ZUB1 1445 aa23.35■■□□□ 1.33
RXRB-201ENST00000374680 SALL2Q9Y467 1007 aaPredicted RBP23.35■■□□□ 1.33
RXRB-201ENST00000374680 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
RXRB-201ENST00000374680 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
RXRB-201ENST00000374680 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
RXRB-201ENST00000374680 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
RXRB-201ENST00000374680 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
RXRB-201ENST00000374680 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
RXRB-201ENST00000374680 ABCA8O94911 1581 aa23.25■■□□□ 1.31
RXRB-201ENST00000374680 ADGRL2O95490 1459 aa23.24■■□□□ 1.31
RXRB-201ENST00000374680 CDC42BPAQ5VT25 1732 aa23.24■■□□□ 1.31
RXRB-201ENST00000374680 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
RXRB-201ENST00000374680 ROCK2O75116 1388 aaKnown RBP23.21■■□□□ 1.31
RXRB-201ENST00000374680 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.31
RXRB-201ENST00000374680 ZBED9Q6R2W3 1325 aa23.19■■□□□ 1.3
RXRB-201ENST00000374680 BCORL1Q5H9F3 1711 aa23.18■■□□□ 1.3
RXRB-201ENST00000374680 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
RXRB-201ENST00000374680 ADGBQ8N7X0 1667 aa23.18■■□□□ 1.3
RXRB-201ENST00000374680 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
RXRB-201ENST00000374680 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
RXRB-201ENST00000374680 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
RXRB-201ENST00000374680 CC2D1BQ5T0F9 858 aaKnown RBP23.14■■□□□ 1.29
RXRB-201ENST00000374680 AFAP1Q8N556 730 aa23.12■■□□□ 1.29
RXRB-201ENST00000374680 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
RXRB-201ENST00000374680 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
RXRB-201ENST00000374680 CCDC141Q6ZP82 1450 aa23.12■■□□□ 1.29
RXRB-201ENST00000374680 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
RXRB-201ENST00000374680 SYCP2Q9BX26 1530 aa23.11■■□□□ 1.29
RXRB-201ENST00000374680 PNISRQ8TF01 805 aaKnown RBP23.11■■□□□ 1.29
RXRB-201ENST00000374680 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
RXRB-201ENST00000374680 SAMD9LQ8IVG5 1584 aa23.09■■□□□ 1.29
RXRB-201ENST00000374680 RSPH4AQ5TD94 716 aa23.08■■□□□ 1.29
RXRB-201ENST00000374680 SHANK2Q9UPX8 1470 aa23.06■■□□□ 1.28
RXRB-201ENST00000374680 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms