RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
A1CF-202ENST00000373993 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.89
A1CF-202ENST00000373993 NEO1Q92859 1461 aa20.57■□□□□ 0.88
A1CF-202ENST00000373993 CLIP1P30622 1438 aa20.55■□□□□ 0.88
A1CF-202ENST00000373993 FANCAO15360 1455 aa20.54■□□□□ 0.88
A1CF-202ENST00000373993 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
A1CF-202ENST00000373993 KIF14Q15058 1648 aa20.53■□□□□ 0.88
A1CF-202ENST00000373993 MYT1LQ9UL68 1186 aa20.53■□□□□ 0.88
A1CF-202ENST00000373993 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
A1CF-202ENST00000373993 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
A1CF-202ENST00000373993 CFAP74Q9C0B2 1584 aa20.51■□□□□ 0.87
A1CF-202ENST00000373993 AKNAQ7Z591 1439 aa20.51■□□□□ 0.87
A1CF-202ENST00000373993 CASKIN1Q8WXD9 1431 aa20.49■□□□□ 0.87
A1CF-202ENST00000373993 MYO5CQ9NQX4 1742 aa20.49■□□□□ 0.87
A1CF-202ENST00000373993 TROQ12816 1431 aaPredicted RBP20.48■□□□□ 0.87
A1CF-202ENST00000373993 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
A1CF-202ENST00000373993 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
A1CF-202ENST00000373993 CCDC18Q5T9S5 1454 aa20.46■□□□□ 0.87
A1CF-202ENST00000373993 PLCH2O75038 1416 aa20.45■□□□□ 0.86
A1CF-202ENST00000373993 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
A1CF-202ENST00000373993 ARHGAP5Q13017 1502 aa20.41■□□□□ 0.86
A1CF-202ENST00000373993 ARID4BQ4LE39 1312 aaPredicted RBP20.4■□□□□ 0.86
A1CF-202ENST00000373993 SCAPERQ9BY12 1400 aa20.4■□□□□ 0.86
A1CF-202ENST00000373993 ARHGEF40Q8TER5 1519 aa20.39■□□□□ 0.85
A1CF-202ENST00000373993 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
A1CF-202ENST00000373993 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
A1CF-202ENST00000373993 CDC42BPBQ9Y5S2 1711 aa20.37■□□□□ 0.85
A1CF-202ENST00000373993 POGZQ7Z3K3 1410 aa20.35■□□□□ 0.85
A1CF-202ENST00000373993 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
A1CF-202ENST00000373993 ZFYVE16Q7Z3T8 1539 aa20.34■□□□□ 0.85
A1CF-202ENST00000373993 ZMYM4Q5VZL5 1548 aa20.34■□□□□ 0.85
A1CF-202ENST00000373993 PREX2Q70Z35 1606 aa20.33■□□□□ 0.85
A1CF-202ENST00000373993 CDC42BPAQ5VT25 1732 aa20.32■□□□□ 0.84
A1CF-202ENST00000373993 BCORL1Q5H9F3 1711 aa20.31■□□□□ 0.84
A1CF-202ENST00000373993 ADAMTSL3P82987 1691 aa20.3■□□□□ 0.84
A1CF-202ENST00000373993 SIGLEC1Q9BZZ2 1709 aa20.29■□□□□ 0.84
A1CF-202ENST00000373993 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
A1CF-202ENST00000373993 AFAP1Q8N556 730 aa20.28■□□□□ 0.84
A1CF-202ENST00000373993 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
A1CF-202ENST00000373993 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.84
A1CF-202ENST00000373993 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
A1CF-202ENST00000373993 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
A1CF-202ENST00000373993 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.84
A1CF-202ENST00000373993 FANCIQ9NVI1 1328 aa20.26■□□□□ 0.83
A1CF-202ENST00000373993 MAGI2Q86UL8 1455 aa20.26■□□□□ 0.83
A1CF-202ENST00000373993 MLECQ14165 292 aa20.26■□□□□ 0.83
A1CF-202ENST00000373993 HECW2Q9P2P5 1572 aa20.25■□□□□ 0.83
A1CF-202ENST00000373993 ABCC1P33527 1531 aa20.25■□□□□ 0.83
A1CF-202ENST00000373993 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
A1CF-202ENST00000373993 RIMS1Q86UR5 1692 aaKnown RBP20.24■□□□□ 0.83
A1CF-202ENST00000373993 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
A1CF-202ENST00000373993 ITSN2Q9NZM3 1697 aa20.24■□□□□ 0.83
A1CF-202ENST00000373993 PTPRMP28827 1452 aa20.23■□□□□ 0.83
A1CF-202ENST00000373993 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
A1CF-202ENST00000373993 KDM5CP41229 1560 aa20.22■□□□□ 0.83
A1CF-202ENST00000373993 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
A1CF-202ENST00000373993 GPATCH8Q9UKJ3 1502 aaKnown RBP20.2■□□□□ 0.82
A1CF-202ENST00000373993 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
A1CF-202ENST00000373993 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
A1CF-202ENST00000373993 ATP10AO60312 1499 aa20.2■□□□□ 0.82
A1CF-202ENST00000373993 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
A1CF-202ENST00000373993 EHBP1L1Q8N3D4 1523 aa20.19■□□□□ 0.82
A1CF-202ENST00000373993 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
A1CF-202ENST00000373993 NEFLP07196 543 aa20.18■□□□□ 0.82
A1CF-202ENST00000373993 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
A1CF-202ENST00000373993 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
A1CF-202ENST00000373993 FER1L4A9Z1Z3 1794 aa20.17■□□□□ 0.82
A1CF-202ENST00000373993 ABCA6Q8N139 1617 aa20.16■□□□□ 0.82
A1CF-202ENST00000373993 DIP2CQ9Y2E4 1556 aa20.16■□□□□ 0.82
A1CF-202ENST00000373993 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
A1CF-202ENST00000373993 HNRNPMP52272 730 aaKnown RBP eCLIP20.14■□□□□ 0.81
A1CF-202ENST00000373993 APLP2Q06481 763 aa20.13■□□□□ 0.81
A1CF-202ENST00000373993 MLH3Q9UHC1 1453 aa20.12■□□□□ 0.81
A1CF-202ENST00000373993 KIDINS220Q9ULH0 1771 aa20.12■□□□□ 0.81
A1CF-202ENST00000373993 FKBP8Q14318 412 aa20.1■□□□□ 0.81
A1CF-202ENST00000373993 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
A1CF-202ENST00000373993 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
A1CF-202ENST00000373993 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
A1CF-202ENST00000373993 ZNF644Q9H582 1327 aaPredicted RBP20.09■□□□□ 0.81
A1CF-202ENST00000373993 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
A1CF-202ENST00000373993 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
A1CF-202ENST00000373993 PLEKHH2Q8IVE3 1493 aa20.06■□□□□ 0.8
A1CF-202ENST00000373993 REREQ9P2R6 1566 aa20.04■□□□□ 0.8
A1CF-202ENST00000373993 KIAA1107Q9UPP5 1409 aa20.04■□□□□ 0.8
A1CF-202ENST00000373993 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
A1CF-202ENST00000373993 CEBPAP49715 358 aaPredicted RBP20.03■□□□□ 0.8
A1CF-202ENST00000373993 LRRC9Q6ZRR7 1453 aa20.02■□□□□ 0.8
A1CF-202ENST00000373993 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
A1CF-202ENST00000373993 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
A1CF-202ENST00000373993 LMTK3Q96Q04 1460 aa20.01■□□□□ 0.79
A1CF-202ENST00000373993 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
A1CF-202ENST00000373993 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
A1CF-202ENST00000373993 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
A1CF-202ENST00000373993 MSH5O43196 834 aa19.99■□□□□ 0.79
A1CF-202ENST00000373993 ESF1Q9H501 851 aaKnown RBP19.99■□□□□ 0.79
A1CF-202ENST00000373993 AGLP35573 1532 aa19.98■□□□□ 0.79
A1CF-202ENST00000373993 HSPA2P54652 639 aa19.98■□□□□ 0.79
A1CF-202ENST00000373993 MBD5Q9P267 1494 aa19.97■□□□□ 0.79
A1CF-202ENST00000373993 A2MP01023 1474 aa19.94■□□□□ 0.78
A1CF-202ENST00000373993 C3P01024 1663 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms