RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 EID1Q9Y6B2 187 aa14.17□□□□□ -0.14
PHACTR4-202ENST00000373839 PKD2Q13563 968 aa14.16□□□□□ -0.14
PHACTR4-202ENST00000373839 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
PHACTR4-202ENST00000373839 VPS8Q8N3P4 1428 aa14.16□□□□□ -0.14
PHACTR4-202ENST00000373839 SUPT16HQ9Y5B9 1047 aaKnown RBP14.15□□□□□ -0.14
PHACTR4-202ENST00000373839 TMX4Q9H1E5 349 aaPredicted RBP14.15□□□□□ -0.14
PHACTR4-202ENST00000373839 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
PHACTR4-202ENST00000373839 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
PHACTR4-202ENST00000373839 GOLGA6L4A6NEF3 574 aa14.14□□□□□ -0.15
PHACTR4-202ENST00000373839 CCER2I3L3R5 266 aa14.14□□□□□ -0.15
PHACTR4-202ENST00000373839 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
PHACTR4-202ENST00000373839 RGS3P49796 1198 aa14.13□□□□□ -0.15
PHACTR4-202ENST00000373839 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
PHACTR4-202ENST00000373839 SOX12O15370 315 aa14.11□□□□□ -0.15
PHACTR4-202ENST00000373839 NUP155O75694 1391 aa14.11□□□□□ -0.15
PHACTR4-202ENST00000373839 RALBP1Q15311 655 aa14.11□□□□□ -0.15
PHACTR4-202ENST00000373839 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
PHACTR4-202ENST00000373839 NAP1L2Q9ULW6 460 aaPredicted RBP14.11□□□□□ -0.15
PHACTR4-202ENST00000373839 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
PHACTR4-202ENST00000373839 STK26Q9P289 416 aa14.1□□□□□ -0.15
PHACTR4-202ENST00000373839 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
PHACTR4-202ENST00000373839 DNTTIP2Q5QJE6 756 aaKnown RBP14.09□□□□□ -0.15
PHACTR4-202ENST00000373839 ERICH6BQ5W0A0 696 aa14.09□□□□□ -0.15
PHACTR4-202ENST00000373839 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
PHACTR4-202ENST00000373839 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
PHACTR4-202ENST00000373839 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.15
PHACTR4-202ENST00000373839 TDRD9Q8NDG6 1382 aaKnown RBP14.08□□□□□ -0.16
PHACTR4-202ENST00000373839 TULP1O00294 542 aaPredicted RBP14.07□□□□□ -0.16
PHACTR4-202ENST00000373839 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
PHACTR4-202ENST00000373839 CCDC18Q5T9S5 1454 aa14.07□□□□□ -0.16
PHACTR4-202ENST00000373839 KIF3BO15066 747 aa14.07□□□□□ -0.16
PHACTR4-202ENST00000373839 STK31Q9BXU1 1019 aa14.07□□□□□ -0.16
PHACTR4-202ENST00000373839 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
PHACTR4-202ENST00000373839 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
PHACTR4-202ENST00000373839 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
PHACTR4-202ENST00000373839 U2AF1L5P0DN76 240 aaPredicted RBP14.06□□□□□ -0.16
PHACTR4-202ENST00000373839 U2AF1Q01081 240 aaKnown RBP eCLIP14.06□□□□□ -0.16
PHACTR4-202ENST00000373839 HSPA5P11021 654 aaKnown RBP14.05□□□□□ -0.16
PHACTR4-202ENST00000373839 MPHOSPH9Q99550 1183 aa14.04□□□□□ -0.16
PHACTR4-202ENST00000373839 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
PHACTR4-202ENST00000373839 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
PHACTR4-202ENST00000373839 PTMSP20962 102 aa14.03□□□□□ -0.16
PHACTR4-202ENST00000373839 RWDD1Q9H446 243 aaPredicted RBP14.03□□□□□ -0.16
PHACTR4-202ENST00000373839 ISY1Q9ULR0 285 aaKnown RBP14.03□□□□□ -0.16
PHACTR4-202ENST00000373839 GNL2Q13823 731 aaKnown RBP14.03□□□□□ -0.16
PHACTR4-202ENST00000373839 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.16
PHACTR4-202ENST00000373839 HMMRO75330 724 aa14.02□□□□□ -0.17
PHACTR4-202ENST00000373839 GPATCH3Q96I76 525 aa14.02□□□□□ -0.17
PHACTR4-202ENST00000373839 UACAQ9BZF9 1416 aa14.02□□□□□ -0.17
PHACTR4-202ENST00000373839 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.17
PHACTR4-202ENST00000373839 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
PHACTR4-202ENST00000373839 NGDNQ8NEJ9 315 aaKnown RBP14.01□□□□□ -0.17
PHACTR4-202ENST00000373839 CCDC34Q96HJ3 373 aa14.01□□□□□ -0.17
PHACTR4-202ENST00000373839 ABCC8Q09428 1581 aa14□□□□□ -0.17
PHACTR4-202ENST00000373839 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
PHACTR4-202ENST00000373839 SENP3-EIF4A1A0A087X0R7 540 aa14□□□□□ -0.17
PHACTR4-202ENST00000373839 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
PHACTR4-202ENST00000373839 TPRNQ4KMQ1 711 aa13.99□□□□□ -0.17
PHACTR4-202ENST00000373839 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
PHACTR4-202ENST00000373839 CHAF1AQ13111 956 aaPredicted RBP13.98□□□□□ -0.17
PHACTR4-202ENST00000373839 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
PHACTR4-202ENST00000373839 JPH4Q96JJ6 628 aa13.98□□□□□ -0.17
PHACTR4-202ENST00000373839 TAF7LQ5H9L4 462 aa13.97□□□□□ -0.17
PHACTR4-202ENST00000373839 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
PHACTR4-202ENST00000373839 PMFBP1Q8TBY8 1022 aa13.97□□□□□ -0.17
PHACTR4-202ENST00000373839 ZNF330Q9Y3S2 320 aaPredicted RBP13.97□□□□□ -0.17
PHACTR4-202ENST00000373839 NOP58Q9Y2X3 529 aaKnown RBP13.96□□□□□ -0.17
PHACTR4-202ENST00000373839 CLSTN1O94985 981 aa13.96□□□□□ -0.17
PHACTR4-202ENST00000373839 AMPHP49418 695 aa13.96□□□□□ -0.18
PHACTR4-202ENST00000373839 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.18
PHACTR4-202ENST00000373839 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
PHACTR4-202ENST00000373839 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
PHACTR4-202ENST00000373839 RAB3GAP2Q9H2M9 1393 aa13.94□□□□□ -0.18
PHACTR4-202ENST00000373839 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
PHACTR4-202ENST00000373839 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.182e-7■■■■□ 22
PHACTR4-202ENST00000373839 KIAA2012Q0VF49 1180 aa13.93□□□□□ -0.18
PHACTR4-202ENST00000373839 NLRP13Q86W25 1043 aa13.93□□□□□ -0.18
PHACTR4-202ENST00000373839 GBP4Q96PP9 640 aa13.93□□□□□ -0.18
PHACTR4-202ENST00000373839 G3V3G9 751 aa13.92□□□□□ -0.18
PHACTR4-202ENST00000373839 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
PHACTR4-202ENST00000373839 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
PHACTR4-202ENST00000373839 CHMP4CQ96CF2 233 aa13.92□□□□□ -0.18
PHACTR4-202ENST00000373839 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
PHACTR4-202ENST00000373839 SYAP1Q96A49 352 aaPredicted RBP13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 PTPRGP23470 1445 aa13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 B4GALNT3Q6L9W6 998 aa13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 SMC4Q9NTJ3 1288 aa13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 KIF3AQ9Y496 699 aa13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 GTF2E1P29083 439 aaPredicted RBP13.9□□□□□ -0.18
PHACTR4-202ENST00000373839 CHMP3Q9Y3E7 222 aa13.89□□□□□ -0.19
PHACTR4-202ENST00000373839 TPM4P67936 248 aa13.89□□□□□ -0.19
PHACTR4-202ENST00000373839 FOXD1Q16676 465 aa13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 APBB1O00213 710 aa13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 DRC7Q8IY82 874 aa13.88□□□□□ -0.19
PHACTR4-202ENST00000373839 MSNP26038 577 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms