RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PKD2Q13563 968 aa16.1■□□□□ 0.17
NCDN-202ENST00000373243 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
NCDN-202ENST00000373243 NEFMP07197 916 aa16.1■□□□□ 0.17
NCDN-202ENST00000373243 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
NCDN-202ENST00000373243 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
NCDN-202ENST00000373243 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
NCDN-202ENST00000373243 DCAF11Q8TEB1 546 aa16.09■□□□□ 0.17
NCDN-202ENST00000373243 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
NCDN-202ENST00000373243 MAPKBP1O60336 1514 aa16.07■□□□□ 0.16
NCDN-202ENST00000373243 CC2D1BQ5T0F9 858 aaKnown RBP16.07■□□□□ 0.16
NCDN-202ENST00000373243 C11orf95C9JLR9 678 aaPredicted RBP16.06■□□□□ 0.16
NCDN-202ENST00000373243 A0A0U1RQG5 324 aaPredicted RBP16.05■□□□□ 0.16
NCDN-202ENST00000373243 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
NCDN-202ENST00000373243 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
NCDN-202ENST00000373243 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
NCDN-202ENST00000373243 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
NCDN-202ENST00000373243 KIF7Q2M1P5 1343 aa16.01■□□□□ 0.15
NCDN-202ENST00000373243 PLEKHD1A6NEE1 506 aa16.01■□□□□ 0.15
NCDN-202ENST00000373243 CANXP27824 592 aaKnown RBP16■□□□□ 0.15
NCDN-202ENST00000373243 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
NCDN-202ENST00000373243 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
NCDN-202ENST00000373243 NCOA2Q15596 1464 aa15.98■□□□□ 0.15
NCDN-202ENST00000373243 MYOM3Q5VTT5 1437 aa15.98■□□□□ 0.15
NCDN-202ENST00000373243 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
NCDN-202ENST00000373243 CCDC7Q96M83 1385 aa15.98■□□□□ 0.15
NCDN-202ENST00000373243 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
NCDN-202ENST00000373243 ZBED9Q6R2W3 1325 aa15.97■□□□□ 0.15
NCDN-202ENST00000373243 ST20-MTHFSA0A0A6YYL1 179 aa15.96■□□□□ 0.15
NCDN-202ENST00000373243 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
NCDN-202ENST00000373243 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
NCDN-202ENST00000373243 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
NCDN-202ENST00000373243 WDR43Q15061 677 aaKnown RBP eCLIP15.95■□□□□ 0.14
NCDN-202ENST00000373243 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
NCDN-202ENST00000373243 ARXQ96QS3 562 aa15.94■□□□□ 0.14
NCDN-202ENST00000373243 NAIPQ13075 1403 aa15.94■□□□□ 0.14
NCDN-202ENST00000373243 PLIN1O60240 522 aa15.93■□□□□ 0.14
NCDN-202ENST00000373243 RGS3P49796 1198 aa15.93■□□□□ 0.14
NCDN-202ENST00000373243 NUP155O75694 1391 aa15.93■□□□□ 0.14
NCDN-202ENST00000373243 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
NCDN-202ENST00000373243 HFM1A2PYH4 1435 aa15.92■□□□□ 0.14
NCDN-202ENST00000373243 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
NCDN-202ENST00000373243 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
NCDN-202ENST00000373243 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
NCDN-202ENST00000373243 CHGAP10645 457 aaKnown RBP15.92■□□□□ 0.14
NCDN-202ENST00000373243 EXOC6Q8TAG9 804 aa15.92■□□□□ 0.14
NCDN-202ENST00000373243 AKNAQ7Z591 1439 aa15.91■□□□□ 0.14
NCDN-202ENST00000373243 FYCO1Q9BQS8 1478 aa15.9■□□□□ 0.14
NCDN-202ENST00000373243 HNRNPMP52272 730 aaKnown RBP eCLIP15.89■□□□□ 0.13
NCDN-202ENST00000373243 USP47Q96K76 1375 aa15.89■□□□□ 0.13
NCDN-202ENST00000373243 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
NCDN-202ENST00000373243 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
NCDN-202ENST00000373243 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
NCDN-202ENST00000373243 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
NCDN-202ENST00000373243 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
NCDN-202ENST00000373243 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.13
NCDN-202ENST00000373243 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.12
NCDN-202ENST00000373243 TNNT2P45379 298 aaPredicted RBP15.83■□□□□ 0.12
NCDN-202ENST00000373243 NAP1L5Q96NT1 182 aaPredicted RBP15.82■□□□□ 0.12
NCDN-202ENST00000373243 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
NCDN-202ENST00000373243 ARID4BQ4LE39 1312 aaPredicted RBP15.81■□□□□ 0.12
NCDN-202ENST00000373243 GSE1Q14687 1217 aa15.8■□□□□ 0.12
NCDN-202ENST00000373243 SKAP1Q86WV1 359 aa15.8■□□□□ 0.12
NCDN-202ENST00000373243 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
NCDN-202ENST00000373243 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
NCDN-202ENST00000373243 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
NCDN-202ENST00000373243 RRP1P56182 461 aaKnown RBP15.79■□□□□ 0.12
NCDN-202ENST00000373243 PDE4AP27815 886 aa15.78■□□□□ 0.12
NCDN-202ENST00000373243 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.78■□□□□ 0.12
NCDN-202ENST00000373243 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
NCDN-202ENST00000373243 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
NCDN-202ENST00000373243 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
NCDN-202ENST00000373243 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
NCDN-202ENST00000373243 RALBP1Q15311 655 aa15.77■□□□□ 0.12
NCDN-202ENST00000373243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.76■□□□□ 0.11
NCDN-202ENST00000373243 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
NCDN-202ENST00000373243 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
NCDN-202ENST00000373243 PNISRQ8TF01 805 aaKnown RBP15.75■□□□□ 0.11
NCDN-202ENST00000373243 PANK3Q9H999 370 aa15.75■□□□□ 0.11
NCDN-202ENST00000373243 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
NCDN-202ENST00000373243 MYBBP1AQ9BQG0 1328 aaKnown RBP15.75■□□□□ 0.11
NCDN-202ENST00000373243 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
NCDN-202ENST00000373243 TMF1P82094 1093 aa15.75■□□□□ 0.11
NCDN-202ENST00000373243 CDK13Q14004 1512 aaKnown RBP15.75■□□□□ 0.11
NCDN-202ENST00000373243 CRBNQ96SW2 442 aa15.74■□□□□ 0.11
NCDN-202ENST00000373243 USP35Q9P2H5 1018 aa15.74■□□□□ 0.11
NCDN-202ENST00000373243 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
NCDN-202ENST00000373243 KIF15Q9NS87 1388 aa15.73■□□□□ 0.11
NCDN-202ENST00000373243 EFCAB5A4FU69 1503 aa15.73■□□□□ 0.11
NCDN-202ENST00000373243 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
NCDN-202ENST00000373243 NBPF1Q3BBV0 1214 aa15.72■□□□□ 0.11
NCDN-202ENST00000373243 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
NCDN-202ENST00000373243 PTPN23Q9H3S7 1636 aa15.71■□□□□ 0.11
NCDN-202ENST00000373243 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
NCDN-202ENST00000373243 ANKRD30BQ9BXX2 1392 aa15.69■□□□□ 0.1
NCDN-202ENST00000373243 PRG4Q92954 1404 aaPredicted RBP15.67■□□□□ 0.1
NCDN-202ENST00000373243 NCOA1Q15788 1441 aa15.66■□□□□ 0.1
NCDN-202ENST00000373243 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
NCDN-202ENST00000373243 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
NCDN-202ENST00000373243 UPF2Q9HAU5 1272 aaKnown RBP15.65■□□□□ 0.1
NCDN-202ENST00000373243 RBM10P98175 930 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms