RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CALD1Q05682 793 aaKnown RBP14.62□□□□□ -0.07
VCL-202ENST00000372755 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
VCL-202ENST00000372755 FHAD1B1AJZ9 1412 aa14.61□□□□□ -0.07
VCL-202ENST00000372755 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
VCL-202ENST00000372755 HDGFL2Q7Z4V5 671 aaPredicted RBP14.61□□□□□ -0.07
VCL-202ENST00000372755 CCER2I3L3R5 266 aa14.6□□□□□ -0.07
VCL-202ENST00000372755 SOX12O15370 315 aa14.6□□□□□ -0.07
VCL-202ENST00000372755 GBP4Q96PP9 640 aa14.6□□□□□ -0.07
VCL-202ENST00000372755 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
VCL-202ENST00000372755 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
VCL-202ENST00000372755 CHMP4AQ9BY43 222 aa14.58□□□□□ -0.07
VCL-202ENST00000372755 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
VCL-202ENST00000372755 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
VCL-202ENST00000372755 RWDD1Q9H446 243 aaPredicted RBP14.56□□□□□ -0.08
VCL-202ENST00000372755 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
VCL-202ENST00000372755 SYAP1Q96A49 352 aaPredicted RBP14.55□□□□□ -0.08
VCL-202ENST00000372755 TPM4P67936 248 aa14.54□□□□□ -0.08
VCL-202ENST00000372755 MLECQ14165 292 aa14.53□□□□□ -0.08
VCL-202ENST00000372755 SAFB2Q14151 953 aaKnown RBP eCLIP14.53□□□□□ -0.08
VCL-202ENST00000372755 APBB1O00213 710 aa14.53□□□□□ -0.08
VCL-202ENST00000372755 NOC3LQ8WTT2 800 aaKnown RBP14.53□□□□□ -0.08
VCL-202ENST00000372755 CCDC34Q96HJ3 373 aa14.53□□□□□ -0.08
VCL-202ENST00000372755 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.08
VCL-202ENST00000372755 HDAC5Q9UQL6 1122 aa14.52□□□□□ -0.09
VCL-202ENST00000372755 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
VCL-202ENST00000372755 HSPA5P11021 654 aaKnown RBP14.51□□□□□ -0.09
VCL-202ENST00000372755 GPATCH3Q96I76 525 aa14.51□□□□□ -0.09
VCL-202ENST00000372755 EIF4G1Q04637 1599 aaKnown RBP14.5□□□□□ -0.09
VCL-202ENST00000372755 CSB-PGBD3P0DP91 1061 aa14.5□□□□□ -0.09
VCL-202ENST00000372755 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
VCL-202ENST00000372755 RALBP1Q15311 655 aa14.5□□□□□ -0.09
VCL-202ENST00000372755 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
VCL-202ENST00000372755 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.091e-8■□□□□ 9.3
VCL-202ENST00000372755 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
VCL-202ENST00000372755 STK26Q9P289 416 aa14.49□□□□□ -0.09
VCL-202ENST00000372755 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
VCL-202ENST00000372755 GORABQ5T7V8 394 aa14.48□□□□□ -0.09
VCL-202ENST00000372755 SETD5Q9C0A6 1442 aa14.48□□□□□ -0.09
VCL-202ENST00000372755 SPAG9O60271 1321 aaKnown RBP14.48□□□□□ -0.09
VCL-202ENST00000372755 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
VCL-202ENST00000372755 RCAN3Q9UKA8 241 aa14.48□□□□□ -0.09
VCL-202ENST00000372755 CSPP1Q1MSJ5 1256 aa14.48□□□□□ -0.09
VCL-202ENST00000372755 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
VCL-202ENST00000372755 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
VCL-202ENST00000372755 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
VCL-202ENST00000372755 HMMRO75330 724 aa14.47□□□□□ -0.09
VCL-202ENST00000372755 GGT6Q6P531 493 aa14.47□□□□□ -0.09
VCL-202ENST00000372755 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
VCL-202ENST00000372755 ZNF330Q9Y3S2 320 aaPredicted RBP14.46□□□□□ -0.09
VCL-202ENST00000372755 PKD2Q13563 968 aa14.46□□□□□ -0.09
VCL-202ENST00000372755 ARHGAP35Q9NRY4 1499 aa14.46□□□□□ -0.09
VCL-202ENST00000372755 ROCK2O75116 1388 aaKnown RBP14.45□□□□□ -0.1
VCL-202ENST00000372755 CARMIL1Q5VZK9 1371 aa14.45□□□□□ -0.1
VCL-202ENST00000372755 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
VCL-202ENST00000372755 TAF7LQ5H9L4 462 aa14.44□□□□□ -0.1
VCL-202ENST00000372755 RBM19Q9Y4C8 960 aaKnown RBP14.43□□□□□ -0.1
VCL-202ENST00000372755 GOLGA6L1Q8N7Z2 621 aa14.42□□□□□ -0.1
VCL-202ENST00000372755 USP35Q9P2H5 1018 aa14.42□□□□□ -0.1
VCL-202ENST00000372755 CHMP3Q9Y3E7 222 aa14.41□□□□□ -0.1
VCL-202ENST00000372755 SLKQ9H2G2 1235 aaPredicted RBP14.41□□□□□ -0.1
VCL-202ENST00000372755 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
VCL-202ENST00000372755 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
VCL-202ENST00000372755 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
VCL-202ENST00000372755 RASSF8Q8NHQ8 419 aa14.4□□□□□ -0.1
VCL-202ENST00000372755 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
VCL-202ENST00000372755 MFAP1P55081 439 aaKnown RBP14.4□□□□□ -0.1
VCL-202ENST00000372755 TERF2IPQ9NYB0 399 aa14.4□□□□□ -0.1
VCL-202ENST00000372755 LMOD3Q0VAK6 560 aa14.4□□□□□ -0.1
VCL-202ENST00000372755 A0A0U1RQG5 324 aaPredicted RBP14.4□□□□□ -0.1
VCL-202ENST00000372755 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
VCL-202ENST00000372755 CUX2O14529 1486 aa14.39□□□□□ -0.11
VCL-202ENST00000372755 KIF3AQ9Y496 699 aa14.38□□□□□ -0.11
VCL-202ENST00000372755 NACADO15069 1562 aa14.38□□□□□ -0.11
VCL-202ENST00000372755 PRM3Q9NNZ6 103 aa14.37□□□□□ -0.11
VCL-202ENST00000372755 PHF14O94880 888 aa14.37□□□□□ -0.11
VCL-202ENST00000372755 G3V3G9 751 aa14.37□□□□□ -0.11
VCL-202ENST00000372755 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
VCL-202ENST00000372755 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
VCL-202ENST00000372755 ANKRD30AQ9BXX3 1397 aa14.36□□□□□ -0.11
VCL-202ENST00000372755 CEP89Q96ST8 783 aa14.36□□□□□ -0.11
VCL-202ENST00000372755 TPM3P06753 285 aa14.36□□□□□ -0.11
VCL-202ENST00000372755 TNNT3P45378 269 aaPredicted RBP14.36□□□□□ -0.11
VCL-202ENST00000372755 EFCAB2Q5VUJ9 269 aa14.36□□□□□ -0.11
VCL-202ENST00000372755 NUP155O75694 1391 aa14.36□□□□□ -0.11
VCL-202ENST00000372755 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
VCL-202ENST00000372755 ST18O60284 1047 aa14.35□□□□□ -0.11
VCL-202ENST00000372755 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
VCL-202ENST00000372755 KIF16BQ96L93 1317 aa14.34□□□□□ -0.11
VCL-202ENST00000372755 CENPJQ9HC77 1338 aaPredicted RBP14.34□□□□□ -0.11
VCL-202ENST00000372755 PDE3BQ13370 1112 aa14.34□□□□□ -0.11
VCL-202ENST00000372755 CHMP4CQ96CF2 233 aa14.34□□□□□ -0.11
VCL-202ENST00000372755 SLC4A10Q6U841 1118 aa14.33□□□□□ -0.11
VCL-202ENST00000372755 EID1Q9Y6B2 187 aa14.33□□□□□ -0.12
VCL-202ENST00000372755 FOXD1Q16676 465 aa14.32□□□□□ -0.12
VCL-202ENST00000372755 MARCH6O60337 910 aa14.32□□□□□ -0.12
VCL-202ENST00000372755 TOMM22Q9NS69 142 aa14.32□□□□□ -0.12
VCL-202ENST00000372755 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
VCL-202ENST00000372755 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
VCL-202ENST00000372755 SF3A1Q15459 793 aaKnown RBP14.31□□□□□ -0.12
VCL-202ENST00000372755 CREBRFQ8IUR6 639 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms