RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-203ENST00000372739 CALD1Q05682 793 aaKnown RBP11.99□□□□□ -0.49
SPTAN1-203ENST00000372739 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
SPTAN1-203ENST00000372739 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-203ENST00000372739 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
SPTAN1-203ENST00000372739 CUX2O14529 1486 aa11.97□□□□□ -0.49
SPTAN1-203ENST00000372739 KTN1Q86UP2 1357 aaKnown RBP11.97□□□□□ -0.49
SPTAN1-203ENST00000372739 PTMSP20962 102 aa11.96□□□□□ -0.49
SPTAN1-203ENST00000372739 GNL2Q13823 731 aaKnown RBP11.96□□□□□ -0.5
SPTAN1-203ENST00000372739 SETD5Q9C0A6 1442 aa11.96□□□□□ -0.5
SPTAN1-203ENST00000372739 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
SPTAN1-203ENST00000372739 KIAA1211Q6ZU35 1233 aa11.95□□□□□ -0.5
SPTAN1-203ENST00000372739 CHMP4AQ9BY43 222 aa11.95□□□□□ -0.5
SPTAN1-203ENST00000372739 MSNP26038 577 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-203ENST00000372739 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
SPTAN1-203ENST00000372739 SOX12O15370 315 aa11.94□□□□□ -0.5
SPTAN1-203ENST00000372739 DRC7Q8IY82 874 aa11.94□□□□□ -0.5
SPTAN1-203ENST00000372739 CLSTN1O94985 981 aa11.94□□□□□ -0.5
SPTAN1-203ENST00000372739 MLECQ14165 292 aa11.94□□□□□ -0.5
SPTAN1-203ENST00000372739 EIF3AQ14152 1382 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-203ENST00000372739 B4GALNT3Q6L9W6 998 aa11.93□□□□□ -0.5
SPTAN1-203ENST00000372739 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-203ENST00000372739 ISY1Q9ULR0 285 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-203ENST00000372739 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
SPTAN1-203ENST00000372739 KIAA2012Q0VF49 1180 aa11.91□□□□□ -0.5
SPTAN1-203ENST00000372739 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPTAN1-203ENST00000372739 HTATSF1O43719 755 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-203ENST00000372739 STK26Q9P289 416 aa11.89□□□□□ -0.51
SPTAN1-203ENST00000372739 RALBP1Q15311 655 aa11.89□□□□□ -0.51
SPTAN1-203ENST00000372739 GBP4Q96PP9 640 aa11.89□□□□□ -0.51
SPTAN1-203ENST00000372739 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-203ENST00000372739 GGT6Q6P531 493 aa11.89□□□□□ -0.51
SPTAN1-203ENST00000372739 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
SPTAN1-203ENST00000372739 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
SPTAN1-203ENST00000372739 PKD2Q13563 968 aa11.88□□□□□ -0.51
SPTAN1-203ENST00000372739 RWDD1Q9H446 243 aaPredicted RBP11.88□□□□□ -0.51
SPTAN1-203ENST00000372739 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
SPTAN1-203ENST00000372739 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
SPTAN1-203ENST00000372739 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
SPTAN1-203ENST00000372739 CSB-PGBD3P0DP91 1061 aa11.86□□□□□ -0.51
SPTAN1-203ENST00000372739 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
SPTAN1-203ENST00000372739 ANKRD30AQ9BXX3 1397 aa11.86□□□□□ -0.51
SPTAN1-203ENST00000372739 SYAP1Q96A49 352 aaPredicted RBP11.86□□□□□ -0.51
SPTAN1-203ENST00000372739 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
SPTAN1-203ENST00000372739 U2AF1L5P0DN76 240 aaPredicted RBP11.85□□□□□ -0.51
SPTAN1-203ENST00000372739 U2AF1Q01081 240 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPTAN1-203ENST00000372739 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
SPTAN1-203ENST00000372739 PMFBP1Q8TBY8 1022 aa11.85□□□□□ -0.51
SPTAN1-203ENST00000372739 TPM4P67936 248 aa11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 STK31Q9BXU1 1019 aa11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 RCAN3Q9UKA8 241 aa11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 APBB1O00213 710 aa11.84□□□□□ -0.51
SPTAN1-203ENST00000372739 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-203ENST00000372739 EFCAB2Q5VUJ9 269 aa11.83□□□□□ -0.52
SPTAN1-203ENST00000372739 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-203ENST00000372739 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
SPTAN1-203ENST00000372739 NUP155O75694 1391 aa11.83□□□□□ -0.52
SPTAN1-203ENST00000372739 GORABQ5T7V8 394 aa11.83□□□□□ -0.52
SPTAN1-203ENST00000372739 HMMRO75330 724 aa11.82□□□□□ -0.52
SPTAN1-203ENST00000372739 PRM3Q9NNZ6 103 aa11.82□□□□□ -0.52
SPTAN1-203ENST00000372739 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
SPTAN1-203ENST00000372739 SOGA1O94964 1423 aa11.81□□□□□ -0.52
SPTAN1-203ENST00000372739 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
SPTAN1-203ENST00000372739 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-203ENST00000372739 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
SPTAN1-203ENST00000372739 NOC3LQ8WTT2 800 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-203ENST00000372739 MPHOSPH9Q99550 1183 aa11.8□□□□□ -0.52
SPTAN1-203ENST00000372739 CECR2Q9BXF3 1484 aa11.8□□□□□ -0.52
SPTAN1-203ENST00000372739 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
SPTAN1-203ENST00000372739 TCERG1O14776 1098 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-203ENST00000372739 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
SPTAN1-203ENST00000372739 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
SPTAN1-203ENST00000372739 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
SPTAN1-203ENST00000372739 HSP90B1P14625 803 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-203ENST00000372739 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
SPTAN1-203ENST00000372739 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-203ENST00000372739 TRIM6-TRIM34B2RNG4 842 aa11.77□□□□□ -0.52
SPTAN1-203ENST00000372739 FOXD1Q16676 465 aa11.77□□□□□ -0.52
SPTAN1-203ENST00000372739 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.52
SPTAN1-203ENST00000372739 PHLDB1Q86UU1 1377 aa11.77□□□□□ -0.52
SPTAN1-203ENST00000372739 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
SPTAN1-203ENST00000372739 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
SPTAN1-203ENST00000372739 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
SPTAN1-203ENST00000372739 G3V3G9 751 aa11.76□□□□□ -0.53
SPTAN1-203ENST00000372739 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
SPTAN1-203ENST00000372739 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-203ENST00000372739 PHF14O94880 888 aa11.74□□□□□ -0.53
SPTAN1-203ENST00000372739 NGDNQ8NEJ9 315 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-203ENST00000372739 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
SPTAN1-203ENST00000372739 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 UACAQ9BZF9 1416 aa11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 AMPHP49418 695 aa11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 KIF3BO15066 747 aa11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 PDE3BQ13370 1112 aa11.73□□□□□ -0.53
SPTAN1-203ENST00000372739 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms