RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
EDF1-202ENST00000371648 ZFYVE16Q7Z3T8 1539 aa23.19■■□□□ 1.3
EDF1-202ENST00000371648 KIF14Q15058 1648 aa23.19■■□□□ 1.3
EDF1-202ENST00000371648 POGZQ7Z3K3 1410 aa23.18■■□□□ 1.3
EDF1-202ENST00000371648 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
EDF1-202ENST00000371648 MLECQ14165 292 aa23.17■■□□□ 1.3
EDF1-202ENST00000371648 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
EDF1-202ENST00000371648 MYO5CQ9NQX4 1742 aa23.15■■□□□ 1.3
EDF1-202ENST00000371648 CASKIN1Q8WXD9 1431 aa23.13■■□□□ 1.29
EDF1-202ENST00000371648 LRRIQ1Q96JM4 1722 aa23.13■■□□□ 1.29
EDF1-202ENST00000371648 ARHGAP5Q13017 1502 aa23.13■■□□□ 1.29
EDF1-202ENST00000371648 AFAP1Q8N556 730 aa23.11■■□□□ 1.29
EDF1-202ENST00000371648 RIMS1Q86UR5 1692 aaKnown RBP23.11■■□□□ 1.29
EDF1-202ENST00000371648 MYT1LQ9UL68 1186 aa23.1■■□□□ 1.29
EDF1-202ENST00000371648 SIGLEC1Q9BZZ2 1709 aa23.1■■□□□ 1.29
EDF1-202ENST00000371648 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
EDF1-202ENST00000371648 CEP162Q5TB80 1403 aa23.08■■□□□ 1.29
EDF1-202ENST00000371648 ATP10AO60312 1499 aa23.08■■□□□ 1.29
EDF1-202ENST00000371648 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
EDF1-202ENST00000371648 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
EDF1-202ENST00000371648 C9orf84Q5VXU9 1444 aa23.05■■□□□ 1.28
EDF1-202ENST00000371648 LMTK3Q96Q04 1460 aa23.04■■□□□ 1.28
EDF1-202ENST00000371648 FYCO1Q9BQS8 1478 aa23.01■■□□□ 1.27
EDF1-202ENST00000371648 HSPA2P54652 639 aa23.01■■□□□ 1.27
EDF1-202ENST00000371648 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
EDF1-202ENST00000371648 KDM5CP41229 1560 aa22.98■■□□□ 1.27
EDF1-202ENST00000371648 TRAPPC8Q9Y2L5 1435 aa22.98■■□□□ 1.27
EDF1-202ENST00000371648 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
EDF1-202ENST00000371648 ARHGEF12Q9NZN5 1544 aa22.97■■□□□ 1.27
EDF1-202ENST00000371648 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
EDF1-202ENST00000371648 PREX2Q70Z35 1606 aa22.96■■□□□ 1.27
EDF1-202ENST00000371648 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
EDF1-202ENST00000371648 ABCC1P33527 1531 aa22.93■■□□□ 1.26
EDF1-202ENST00000371648 MLH3Q9UHC1 1453 aa22.93■■□□□ 1.26
EDF1-202ENST00000371648 DIP2CQ9Y2E4 1556 aa22.92■■□□□ 1.26
EDF1-202ENST00000371648 CDC42BPAQ5VT25 1732 aa22.89■■□□□ 1.26
EDF1-202ENST00000371648 GPATCH8Q9UKJ3 1502 aaKnown RBP22.88■■□□□ 1.25
EDF1-202ENST00000371648 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
EDF1-202ENST00000371648 FBXO41Q8TF61 875 aa22.88■■□□□ 1.25
EDF1-202ENST00000371648 ABCA6Q8N139 1617 aa22.88■■□□□ 1.25
EDF1-202ENST00000371648 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
EDF1-202ENST00000371648 CFDP1Q9UEE9 299 aaPredicted RBP22.86■■□□□ 1.25
EDF1-202ENST00000371648 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
EDF1-202ENST00000371648 REREQ9P2R6 1566 aa22.85■■□□□ 1.25
EDF1-202ENST00000371648 ESF1Q9H501 851 aaKnown RBP22.85■■□□□ 1.25
EDF1-202ENST00000371648 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
EDF1-202ENST00000371648 SAMD9LQ8IVG5 1584 aa22.83■■□□□ 1.25
EDF1-202ENST00000371648 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
EDF1-202ENST00000371648 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
EDF1-202ENST00000371648 AGLP35573 1532 aa22.81■■□□□ 1.24
EDF1-202ENST00000371648 SYCP2Q9BX26 1530 aa22.81■■□□□ 1.24
EDF1-202ENST00000371648 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
EDF1-202ENST00000371648 KIAA1107Q9UPP5 1409 aa22.77■■□□□ 1.24
EDF1-202ENST00000371648 PREX1Q8TCU6 1659 aa22.76■■□□□ 1.23
EDF1-202ENST00000371648 UHRF1BP1Q6BDS2 1440 aa22.75■■□□□ 1.23
EDF1-202ENST00000371648 PLEKHH2Q8IVE3 1493 aa22.75■■□□□ 1.23
EDF1-202ENST00000371648 ZNF644Q9H582 1327 aaPredicted RBP22.75■■□□□ 1.23
EDF1-202ENST00000371648 APLP2Q06481 763 aa22.74■■□□□ 1.23
EDF1-202ENST00000371648 C3P01024 1663 aa22.71■■□□□ 1.23
EDF1-202ENST00000371648 CNTLNQ9NXG0 1405 aa22.7■■□□□ 1.22
EDF1-202ENST00000371648 ATP7AQ04656 1500 aa22.7■■□□□ 1.22
EDF1-202ENST00000371648 EHBP1L1Q8N3D4 1523 aa22.7■■□□□ 1.22
EDF1-202ENST00000371648 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
EDF1-202ENST00000371648 CERKQ8TCT0 537 aa22.69■■□□□ 1.22
EDF1-202ENST00000371648 TIAM1Q13009 1591 aa22.68■■□□□ 1.22
EDF1-202ENST00000371648 DMRT2Q9Y5R5 561 aa22.68■■□□□ 1.22
EDF1-202ENST00000371648 A2MP01023 1474 aa22.67■■□□□ 1.22
EDF1-202ENST00000371648 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
EDF1-202ENST00000371648 GGT6Q6P531 493 aa22.66■■□□□ 1.22
EDF1-202ENST00000371648 ZMYM3Q14202 1370 aa22.65■■□□□ 1.22
EDF1-202ENST00000371648 INO80Q9ULG1 1556 aaPredicted RBP22.65■■□□□ 1.22
EDF1-202ENST00000371648 MBD5Q9P267 1494 aa22.64■■□□□ 1.21
EDF1-202ENST00000371648 STRCQ7RTU9 1775 aa22.62■■□□□ 1.21
EDF1-202ENST00000371648 NCOA2Q15596 1464 aa22.6■■□□□ 1.21
EDF1-202ENST00000371648 PLXNC1O60486 1568 aa22.6■■□□□ 1.21
EDF1-202ENST00000371648 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
EDF1-202ENST00000371648 NPATQ14207 1427 aa22.58■■□□□ 1.21
EDF1-202ENST00000371648 LRRC9Q6ZRR7 1453 aa22.58■■□□□ 1.2
EDF1-202ENST00000371648 MAP3K1Q13233 1512 aa22.57■■□□□ 1.2
EDF1-202ENST00000371648 RTEL1-TNFRSF6BF6WH68 1400 aa22.57■■□□□ 1.2
EDF1-202ENST00000371648 MROH2AA6NES4 1674 aa22.56■■□□□ 1.2
EDF1-202ENST00000371648 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
EDF1-202ENST00000371648 PPP6R1Q9UPN7 881 aa22.55■■□□□ 1.2
EDF1-202ENST00000371648 PTPRTO14522 1441 aa22.55■■□□□ 1.2
EDF1-202ENST00000371648 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
EDF1-202ENST00000371648 ADGBQ8N7X0 1667 aa22.54■■□□□ 1.2
EDF1-202ENST00000371648 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
EDF1-202ENST00000371648 RSPH4AQ5TD94 716 aa22.53■■□□□ 1.2
EDF1-202ENST00000371648 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
EDF1-202ENST00000371648 NCOA1Q15788 1441 aa22.52■■□□□ 1.2
EDF1-202ENST00000371648 KIF3BO15066 747 aa22.52■■□□□ 1.2
EDF1-202ENST00000371648 PTPRKQ15262 1439 aa22.51■■□□□ 1.19
EDF1-202ENST00000371648 TSPY4P0CV99 314 aa22.49■■□□□ 1.19
EDF1-202ENST00000371648 TSPY10P0CW01 314 aa22.49■■□□□ 1.19
EDF1-202ENST00000371648 NCKAP5LQ9HCH0 1330 aa22.49■■□□□ 1.19
EDF1-202ENST00000371648 CAMSAP1Q5T5Y3 1602 aa22.49■■□□□ 1.19
EDF1-202ENST00000371648 FBXO31Q5XUX0 539 aaPredicted RBP22.43■■□□□ 1.18
EDF1-202ENST00000371648 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
EDF1-202ENST00000371648 WASHC2CQ9Y4E1 1318 aa22.42■■□□□ 1.18
EDF1-202ENST00000371648 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms