RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 BCL11AQ9H165 835 aa9.96□□□□□ -0.81
ABCD3-202ENST00000370214 HFM1A2PYH4 1435 aa9.96□□□□□ -0.82
ABCD3-202ENST00000370214 PRG4Q92954 1404 aaPredicted RBP9.95□□□□□ -0.82
ABCD3-202ENST00000370214 PPP4R2Q9NY27 417 aa9.95□□□□□ -0.82
ABCD3-202ENST00000370214 FYCO1Q9BQS8 1478 aa9.95□□□□□ -0.82
ABCD3-202ENST00000370214 CCDC7Q96M83 1385 aa9.95□□□□□ -0.82
ABCD3-202ENST00000370214 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
ABCD3-202ENST00000370214 TSPY4P0CV99 314 aa9.95□□□□□ -0.82
ABCD3-202ENST00000370214 TSPY10P0CW01 314 aa9.95□□□□□ -0.82
ABCD3-202ENST00000370214 NBPF1Q3BBV0 1214 aa9.94□□□□□ -0.82
ABCD3-202ENST00000370214 NUP155O75694 1391 aa9.94□□□□□ -0.82
ABCD3-202ENST00000370214 PLEKHD1A6NEE1 506 aa9.94□□□□□ -0.82
ABCD3-202ENST00000370214 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
ABCD3-202ENST00000370214 KDM6BO15054 1643 aa9.93□□□□□ -0.82
ABCD3-202ENST00000370214 MAGI3Q5TCQ9 1506 aa9.92□□□□□ -0.82
ABCD3-202ENST00000370214 ABCA10Q8WWZ4 1543 aa9.92□□□□□ -0.82
ABCD3-202ENST00000370214 ZNF608Q9ULD9 1512 aaPredicted RBP9.92□□□□□ -0.82
ABCD3-202ENST00000370214 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
ABCD3-202ENST00000370214 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
ABCD3-202ENST00000370214 CFAP43Q8NDM7 1665 aa9.9□□□□□ -0.82
ABCD3-202ENST00000370214 TNNT2P45379 298 aaPredicted RBP9.9□□□□□ -0.82
ABCD3-202ENST00000370214 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
ABCD3-202ENST00000370214 SNAPC4Q5SXM2 1469 aa9.9□□□□□ -0.82
ABCD3-202ENST00000370214 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.83
ABCD3-202ENST00000370214 PTPN23Q9H3S7 1636 aa9.89□□□□□ -0.83
ABCD3-202ENST00000370214 USP47Q96K76 1375 aa9.89□□□□□ -0.83
ABCD3-202ENST00000370214 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
ABCD3-202ENST00000370214 DNMBPQ6XZF7 1577 aa9.89□□□□□ -0.83
ABCD3-202ENST00000370214 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
ABCD3-202ENST00000370214 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
ABCD3-202ENST00000370214 THOC2Q8NI27 1593 aaKnown RBP9.87□□□□□ -0.83
ABCD3-202ENST00000370214 CNTLNQ9NXG0 1405 aa9.87□□□□□ -0.83
ABCD3-202ENST00000370214 EPRSP07814 1512 aaKnown RBP9.87□□□□□ -0.83
ABCD3-202ENST00000370214 CUL7Q14999 1698 aa9.86□□□□□ -0.83
ABCD3-202ENST00000370214 PLB1Q6P1J6 1458 aa9.86□□□□□ -0.83
ABCD3-202ENST00000370214 ANKRD30BQ9BXX2 1392 aa9.86□□□□□ -0.83
ABCD3-202ENST00000370214 DENND4BO75064 1496 aaPredicted RBP9.85□□□□□ -0.83
ABCD3-202ENST00000370214 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
ABCD3-202ENST00000370214 CCDC146Q8IYE0 955 aa9.85□□□□□ -0.83
ABCD3-202ENST00000370214 ABCC5O15440 1437 aa9.85□□□□□ -0.83
ABCD3-202ENST00000370214 ZBED9Q6R2W3 1325 aa9.84□□□□□ -0.83
ABCD3-202ENST00000370214 GRIN2BQ13224 1484 aa9.84□□□□□ -0.83
ABCD3-202ENST00000370214 NUDCQ9Y266 331 aa9.84□□□□□ -0.83
ABCD3-202ENST00000370214 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
ABCD3-202ENST00000370214 ERCC6Q03468 1493 aa9.83□□□□□ -0.84
ABCD3-202ENST00000370214 CTTNBP2Q8WZ74 1663 aa9.83□□□□□ -0.84
ABCD3-202ENST00000370214 DEKP35659 375 aaKnown RBP9.83□□□□□ -0.84
ABCD3-202ENST00000370214 PANK3Q9H999 370 aa9.83□□□□□ -0.84
ABCD3-202ENST00000370214 DAPK1P53355 1430 aa9.83□□□□□ -0.84
ABCD3-202ENST00000370214 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
ABCD3-202ENST00000370214 ROCK2O75116 1388 aaKnown RBP9.82□□□□□ -0.84
ABCD3-202ENST00000370214 ANP32AP39687 249 aaKnown RBP9.82□□□□□ -0.84
ABCD3-202ENST00000370214 RGS3P49796 1198 aa9.82□□□□□ -0.84
ABCD3-202ENST00000370214 EFCAB5A4FU69 1503 aa9.82□□□□□ -0.84
ABCD3-202ENST00000370214 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
ABCD3-202ENST00000370214 NOP58Q9Y2X3 529 aaKnown RBP9.81□□□□□ -0.84
ABCD3-202ENST00000370214 ARXQ96QS3 562 aa9.81□□□□□ -0.84
ABCD3-202ENST00000370214 C20orf194Q5TEA3 1177 aa9.8□□□□□ -0.84
ABCD3-202ENST00000370214 SAFB2Q14151 953 aaKnown RBP eCLIP9.8□□□□□ -0.84
ABCD3-202ENST00000370214 RCAN3Q9UKA8 241 aa9.79□□□□□ -0.84
ABCD3-202ENST00000370214 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
ABCD3-202ENST00000370214 NCOA1Q15788 1441 aa9.79□□□□□ -0.84
ABCD3-202ENST00000370214 RTL5Q5HYW3 569 aaPredicted RBP9.78□□□□□ -0.84
ABCD3-202ENST00000370214 SUPT6HQ7KZ85 1726 aaKnown RBP9.78□□□□□ -0.84
ABCD3-202ENST00000370214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.78□□□□□ -0.84
ABCD3-202ENST00000370214 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
ABCD3-202ENST00000370214 UGGT2Q9NYU1 1516 aa9.77□□□□□ -0.84
ABCD3-202ENST00000370214 ANKRD50Q9ULJ7 1429 aa9.77□□□□□ -0.84
ABCD3-202ENST00000370214 EHBP1L1Q8N3D4 1523 aa9.77□□□□□ -0.85
ABCD3-202ENST00000370214 ANKRD30AQ9BXX3 1397 aa9.77□□□□□ -0.85
ABCD3-202ENST00000370214 CRBNQ96SW2 442 aa9.77□□□□□ -0.85
ABCD3-202ENST00000370214 KDM5BQ9UGL1 1544 aa9.77□□□□□ -0.85
ABCD3-202ENST00000370214 AFAP1Q8N556 730 aa9.77□□□□□ -0.85
ABCD3-202ENST00000370214 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.85
ABCD3-202ENST00000370214 SAMD9Q5K651 1589 aa9.76□□□□□ -0.85
ABCD3-202ENST00000370214 ADAMTS8Q9UP79 889 aa9.76□□□□□ -0.85
ABCD3-202ENST00000370214 LRRIQ1Q96JM4 1722 aa9.76□□□□□ -0.85
ABCD3-202ENST00000370214 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
ABCD3-202ENST00000370214 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
ABCD3-202ENST00000370214 NUP153P49790 1475 aaKnown RBP9.75□□□□□ -0.85
ABCD3-202ENST00000370214 RRP1P56182 461 aaKnown RBP9.74□□□□□ -0.85
ABCD3-202ENST00000370214 BCL2L13Q9BXK5 485 aa9.74□□□□□ -0.85
ABCD3-202ENST00000370214 RPRD2Q5VT52 1461 aaKnown RBP9.74□□□□□ -0.85
ABCD3-202ENST00000370214 WDR43Q15061 677 aaKnown RBP eCLIP9.74□□□□□ -0.85
ABCD3-202ENST00000370214 FANCIQ9NVI1 1328 aa9.74□□□□□ -0.85
ABCD3-202ENST00000370214 IQGAP2Q13576 1575 aa9.73□□□□□ -0.85
ABCD3-202ENST00000370214 DHX29Q7Z478 1369 aaKnown RBP9.73□□□□□ -0.85
ABCD3-202ENST00000370214 FRAT1Q92837 279 aaPredicted RBP9.73□□□□□ -0.85
ABCD3-202ENST00000370214 KNSTRNQ9Y448 316 aa9.73□□□□□ -0.85
ABCD3-202ENST00000370214 NEFMP07197 916 aa9.72□□□□□ -0.85
ABCD3-202ENST00000370214 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
ABCD3-202ENST00000370214 PDE4AP27815 886 aa9.71□□□□□ -0.85
ABCD3-202ENST00000370214 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.85
ABCD3-202ENST00000370214 CAMSAP2Q08AD1 1489 aa9.71□□□□□ -0.85
ABCD3-202ENST00000370214 KIAA1107Q9UPP5 1409 aa9.71□□□□□ -0.86
ABCD3-202ENST00000370214 SPRYD3Q8NCJ5 442 aa9.71□□□□□ -0.86
ABCD3-202ENST00000370214 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
ABCD3-202ENST00000370214 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
ABCD3-202ENST00000370214 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
ABCD3-202ENST00000370214 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms