RNA–Protein interactions for RNA: ENST00000369049.8

ECM1-203, Transcript of extracellular matrix protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECM1, Length 1,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-203ENST00000369049 LRRIQ1Q96JM4 1722 aa19.98■□□□□ 0.79
ECM1-203ENST00000369049 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
ECM1-203ENST00000369049 ZFYVE16Q7Z3T8 1539 aa19.97■□□□□ 0.79
ECM1-203ENST00000369049 ARHGAP5Q13017 1502 aa19.96■□□□□ 0.79
ECM1-203ENST00000369049 ADAMTSL3P82987 1691 aa19.95■□□□□ 0.78
ECM1-203ENST00000369049 BCORL1Q5H9F3 1711 aa19.93■□□□□ 0.78
ECM1-203ENST00000369049 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
ECM1-203ENST00000369049 PTPRMP28827 1452 aa19.89■□□□□ 0.77
ECM1-203ENST00000369049 PREX2Q70Z35 1606 aa19.89■□□□□ 0.77
ECM1-203ENST00000369049 ATP10AO60312 1499 aa19.88■□□□□ 0.77
ECM1-203ENST00000369049 YEATS2Q9ULM3 1422 aa19.88■□□□□ 0.77
ECM1-203ENST00000369049 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
ECM1-203ENST00000369049 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
ECM1-203ENST00000369049 CEP162Q5TB80 1403 aa19.86■□□□□ 0.77
ECM1-203ENST00000369049 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
ECM1-203ENST00000369049 KDM5CP41229 1560 aa19.85■□□□□ 0.77
ECM1-203ENST00000369049 MADDQ8WXG6 1647 aa19.84■□□□□ 0.77
ECM1-203ENST00000369049 MTUS2Q5JR59 1369 aa19.83■□□□□ 0.76
ECM1-203ENST00000369049 ABCC1P33527 1531 aa19.82■□□□□ 0.76
ECM1-203ENST00000369049 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
ECM1-203ENST00000369049 AFAP1Q8N556 730 aa19.81■□□□□ 0.76
ECM1-203ENST00000369049 MLH3Q9UHC1 1453 aa19.81■□□□□ 0.76
ECM1-203ENST00000369049 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
ECM1-203ENST00000369049 CCNB3Q8WWL7 1395 aa19.79■□□□□ 0.76
ECM1-203ENST00000369049 PLEKHH2Q8IVE3 1493 aa19.79■□□□□ 0.76
ECM1-203ENST00000369049 GPATCH8Q9UKJ3 1502 aaKnown RBP19.79■□□□□ 0.76
ECM1-203ENST00000369049 RIMS1Q86UR5 1692 aaKnown RBP19.78■□□□□ 0.76
ECM1-203ENST00000369049 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
ECM1-203ENST00000369049 REREQ9P2R6 1566 aa19.77■□□□□ 0.76
ECM1-203ENST00000369049 EHBP1L1Q8N3D4 1523 aa19.77■□□□□ 0.76
ECM1-203ENST00000369049 CFDP1Q9UEE9 299 aaPredicted RBP19.76■□□□□ 0.75
ECM1-203ENST00000369049 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
ECM1-203ENST00000369049 KIAA1107Q9UPP5 1409 aa19.75■□□□□ 0.75
ECM1-203ENST00000369049 MLECQ14165 292 aa19.74■□□□□ 0.75
ECM1-203ENST00000369049 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
ECM1-203ENST00000369049 ARHGEF12Q9NZN5 1544 aa19.74■□□□□ 0.75
ECM1-203ENST00000369049 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
ECM1-203ENST00000369049 SIGLEC1Q9BZZ2 1709 aa19.73■□□□□ 0.75
ECM1-203ENST00000369049 FER1L4A9Z1Z3 1794 aa19.73■□□□□ 0.75
ECM1-203ENST00000369049 SAMD9LQ8IVG5 1584 aa19.72■□□□□ 0.75
ECM1-203ENST00000369049 AGLP35573 1532 aa19.71■□□□□ 0.75
ECM1-203ENST00000369049 SPAG9O60271 1321 aaKnown RBP19.69■□□□□ 0.74
ECM1-203ENST00000369049 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
ECM1-203ENST00000369049 SYCP2Q9BX26 1530 aa19.69■□□□□ 0.74
ECM1-203ENST00000369049 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
ECM1-203ENST00000369049 ESF1Q9H501 851 aaKnown RBP19.66■□□□□ 0.74
ECM1-203ENST00000369049 KIDINS220Q9ULH0 1771 aa19.66■□□□□ 0.74
ECM1-203ENST00000369049 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
ECM1-203ENST00000369049 HNRNPMP52272 730 aaKnown RBP eCLIP19.66■□□□□ 0.74
ECM1-203ENST00000369049 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
ECM1-203ENST00000369049 LMTK3Q96Q04 1460 aa19.65■□□□□ 0.74
ECM1-203ENST00000369049 SUPT6HQ7KZ85 1726 aaKnown RBP19.64■□□□□ 0.73
ECM1-203ENST00000369049 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
ECM1-203ENST00000369049 ATP7AQ04656 1500 aa19.62■□□□□ 0.73
ECM1-203ENST00000369049 CNTLNQ9NXG0 1405 aa19.62■□□□□ 0.73
ECM1-203ENST00000369049 RSPH4AQ5TD94 716 aa19.61■□□□□ 0.73
ECM1-203ENST00000369049 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
ECM1-203ENST00000369049 MAP3K1Q13233 1512 aa19.6■□□□□ 0.73
ECM1-203ENST00000369049 INO80Q9ULG1 1556 aaPredicted RBP19.6■□□□□ 0.73
ECM1-203ENST00000369049 RTEL1-TNFRSF6BF6WH68 1400 aa19.57■□□□□ 0.72
ECM1-203ENST00000369049 A2MP01023 1474 aa19.57■□□□□ 0.72
ECM1-203ENST00000369049 LRRC9Q6ZRR7 1453 aa19.57■□□□□ 0.72
ECM1-203ENST00000369049 PREX1Q8TCU6 1659 aa19.56■□□□□ 0.72
ECM1-203ENST00000369049 MBD5Q9P267 1494 aa19.56■□□□□ 0.72
ECM1-203ENST00000369049 ADGBQ8N7X0 1667 aa19.54■□□□□ 0.72
ECM1-203ENST00000369049 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
ECM1-203ENST00000369049 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
ECM1-203ENST00000369049 PLXNC1O60486 1568 aa19.53■□□□□ 0.72
ECM1-203ENST00000369049 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
ECM1-203ENST00000369049 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
ECM1-203ENST00000369049 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
ECM1-203ENST00000369049 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
ECM1-203ENST00000369049 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
ECM1-203ENST00000369049 APLP2Q06481 763 aa19.52■□□□□ 0.72
ECM1-203ENST00000369049 MROH2AA6NES4 1674 aa19.51■□□□□ 0.71
ECM1-203ENST00000369049 HSPA2P54652 639 aa19.51■□□□□ 0.71
ECM1-203ENST00000369049 C3P01024 1663 aa19.5■□□□□ 0.71
ECM1-203ENST00000369049 ARHGEF5Q12774 1597 aa19.48■□□□□ 0.71
ECM1-203ENST00000369049 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
ECM1-203ENST00000369049 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
ECM1-203ENST00000369049 ILDR1Q86SU0 546 aaPredicted RBP19.48■□□□□ 0.71
ECM1-203ENST00000369049 NPATQ14207 1427 aa19.47■□□□□ 0.71
ECM1-203ENST00000369049 DMRT2Q9Y5R5 561 aa19.47■□□□□ 0.71
ECM1-203ENST00000369049 DHX29Q7Z478 1369 aaKnown RBP19.47■□□□□ 0.71
ECM1-203ENST00000369049 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
ECM1-203ENST00000369049 ZMYM3Q14202 1370 aa19.45■□□□□ 0.7
ECM1-203ENST00000369049 GGT6Q6P531 493 aa19.44■□□□□ 0.7
ECM1-203ENST00000369049 KANK4Q5T7N3 995 aaPredicted RBP19.43■□□□□ 0.7
ECM1-203ENST00000369049 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
ECM1-203ENST00000369049 FAM135AQ9P2D6 1515 aa19.43■□□□□ 0.7
ECM1-203ENST00000369049 CLTCQ00610 1675 aaKnown RBP19.41■□□□□ 0.7
ECM1-203ENST00000369049 FBXO41Q8TF61 875 aa19.39■□□□□ 0.7
ECM1-203ENST00000369049 MAST1Q9Y2H9 1570 aa19.39■□□□□ 0.69
ECM1-203ENST00000369049 KIF3BO15066 747 aa19.37■□□□□ 0.69
ECM1-203ENST00000369049 PTPRKQ15262 1439 aa19.35■□□□□ 0.69
ECM1-203ENST00000369049 PTPRTO14522 1441 aa19.34■□□□□ 0.69
ECM1-203ENST00000369049 KDM5DQ9BY66 1539 aa19.33■□□□□ 0.69
ECM1-203ENST00000369049 WASHC2CQ9Y4E1 1318 aa19.32■□□□□ 0.68
ECM1-203ENST00000369049 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
ECM1-203ENST00000369049 NCOA1Q15788 1441 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms