RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
ECM1-202ENST00000369047 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
ECM1-202ENST00000369047 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
ECM1-202ENST00000369047 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
ECM1-202ENST00000369047 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
ECM1-202ENST00000369047 FAM69CQ0P6D2 419 aa19.04■□□□□ 0.64
ECM1-202ENST00000369047 PTPRKQ15262 1439 aa19.02■□□□□ 0.64
ECM1-202ENST00000369047 MIER1Q8N108 512 aa19.02■□□□□ 0.63
ECM1-202ENST00000369047 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
ECM1-202ENST00000369047 NAIPQ13075 1403 aa18.99■□□□□ 0.63
ECM1-202ENST00000369047 MAP3K4Q9Y6R4 1608 aa18.98■□□□□ 0.63
ECM1-202ENST00000369047 KCNH8Q96L42 1107 aa18.98■□□□□ 0.63
ECM1-202ENST00000369047 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
ECM1-202ENST00000369047 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
ECM1-202ENST00000369047 KIF14Q15058 1648 aa18.97■□□□□ 0.63
ECM1-202ENST00000369047 AKNAQ7Z591 1439 aa18.97■□□□□ 0.63
ECM1-202ENST00000369047 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
ECM1-202ENST00000369047 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
ECM1-202ENST00000369047 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
ECM1-202ENST00000369047 CD109Q6YHK3 1445 aa18.92■□□□□ 0.62
ECM1-202ENST00000369047 GCC2Q8IWJ2 1684 aa18.91■□□□□ 0.62
ECM1-202ENST00000369047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.91■□□□□ 0.62
ECM1-202ENST00000369047 TSPOAP1O95153 1857 aa18.89■□□□□ 0.61
ECM1-202ENST00000369047 PPP1R15AO75807 674 aaPredicted RBP18.89■□□□□ 0.61
ECM1-202ENST00000369047 CFAP74Q9C0B2 1584 aa18.87■□□□□ 0.61
ECM1-202ENST00000369047 TTC37Q6PGP7 1564 aa18.87■□□□□ 0.61
ECM1-202ENST00000369047 MYO5CQ9NQX4 1742 aa18.87■□□□□ 0.61
ECM1-202ENST00000369047 PPRC1Q5VV67 1664 aaKnown RBP18.86■□□□□ 0.61
ECM1-202ENST00000369047 ARAP3Q8WWN8 1544 aa18.86■□□□□ 0.61
ECM1-202ENST00000369047 ROCK1Q13464 1354 aa18.85■□□□□ 0.61
ECM1-202ENST00000369047 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
ECM1-202ENST00000369047 NEO1Q92859 1461 aa18.82■□□□□ 0.6
ECM1-202ENST00000369047 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
ECM1-202ENST00000369047 PLCH2O75038 1416 aa18.82■□□□□ 0.6
ECM1-202ENST00000369047 DNMT1P26358 1616 aaKnown RBP18.81■□□□□ 0.6
ECM1-202ENST00000369047 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
ECM1-202ENST00000369047 DAPK1P53355 1430 aa18.81■□□□□ 0.6
ECM1-202ENST00000369047 PREX2Q70Z35 1606 aa18.8■□□□□ 0.6
ECM1-202ENST00000369047 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
ECM1-202ENST00000369047 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
ECM1-202ENST00000369047 FANCAO15360 1455 aa18.77■□□□□ 0.6
ECM1-202ENST00000369047 ABCC5O15440 1437 aa18.77■□□□□ 0.6
ECM1-202ENST00000369047 KDM6BO15054 1643 aa18.77■□□□□ 0.6
ECM1-202ENST00000369047 ARHGAP5Q13017 1502 aa18.77■□□□□ 0.59
ECM1-202ENST00000369047 EFCAB2Q5VUJ9 269 aa18.77■□□□□ 0.59
ECM1-202ENST00000369047 CDC42BPAQ5VT25 1732 aa18.76■□□□□ 0.59
ECM1-202ENST00000369047 GTF3C3Q9Y5Q9 886 aa18.75■□□□□ 0.59
ECM1-202ENST00000369047 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
ECM1-202ENST00000369047 CDC42BPBQ9Y5S2 1711 aa18.73■□□□□ 0.59
ECM1-202ENST00000369047 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
ECM1-202ENST00000369047 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
ECM1-202ENST00000369047 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
ECM1-202ENST00000369047 CAMSAP2Q08AD1 1489 aa18.7■□□□□ 0.58
ECM1-202ENST00000369047 PLEKHH2Q8IVE3 1493 aa18.7■□□□□ 0.58
ECM1-202ENST00000369047 DENND4BO75064 1496 aaPredicted RBP18.7■□□□□ 0.58
ECM1-202ENST00000369047 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
ECM1-202ENST00000369047 ADGRL1O94910 1474 aa18.69■□□□□ 0.58
ECM1-202ENST00000369047 ADGBQ8N7X0 1667 aa18.67■□□□□ 0.58
ECM1-202ENST00000369047 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
ECM1-202ENST00000369047 ABCC1P33527 1531 aa18.64■□□□□ 0.58
ECM1-202ENST00000369047 NCOA1Q15788 1441 aa18.64■□□□□ 0.57
ECM1-202ENST00000369047 SCAPERQ9BY12 1400 aa18.64■□□□□ 0.57
ECM1-202ENST00000369047 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
ECM1-202ENST00000369047 SAMD9LQ8IVG5 1584 aa18.63■□□□□ 0.57
ECM1-202ENST00000369047 KIAA1107Q9UPP5 1409 aa18.63■□□□□ 0.57
ECM1-202ENST00000369047 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
ECM1-202ENST00000369047 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
ECM1-202ENST00000369047 POGZQ7Z3K3 1410 aa18.6■□□□□ 0.57
ECM1-202ENST00000369047 ANKRD30BQ9BXX2 1392 aa18.6■□□□□ 0.57
ECM1-202ENST00000369047 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
ECM1-202ENST00000369047 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
ECM1-202ENST00000369047 ZNF518AQ6AHZ1 1483 aa18.6■□□□□ 0.57
ECM1-202ENST00000369047 COL17A1Q9UMD9 1497 aaPredicted RBP18.6■□□□□ 0.57
ECM1-202ENST00000369047 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.57
ECM1-202ENST00000369047 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.57
ECM1-202ENST00000369047 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
ECM1-202ENST00000369047 RPRD2Q5VT52 1461 aaKnown RBP18.57■□□□□ 0.56
ECM1-202ENST00000369047 FRMPD1Q5SYB0 1578 aa18.57■□□□□ 0.56
ECM1-202ENST00000369047 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
ECM1-202ENST00000369047 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
ECM1-202ENST00000369047 MAGI2Q86UL8 1455 aa18.57■□□□□ 0.56
ECM1-202ENST00000369047 KDM5CP41229 1560 aa18.55■□□□□ 0.56
ECM1-202ENST00000369047 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
ECM1-202ENST00000369047 RAPGEF3O95398 923 aa18.53■□□□□ 0.56
ECM1-202ENST00000369047 PZPP20742 1482 aa18.53■□□□□ 0.56
ECM1-202ENST00000369047 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
ECM1-202ENST00000369047 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
ECM1-202ENST00000369047 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
ECM1-202ENST00000369047 ARHGEF12Q9NZN5 1544 aa18.53■□□□□ 0.56
ECM1-202ENST00000369047 TSPY4P0CV99 314 aa18.52■□□□□ 0.56
ECM1-202ENST00000369047 TSPY10P0CW01 314 aa18.52■□□□□ 0.56
ECM1-202ENST00000369047 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.56
ECM1-202ENST00000369047 ANP32CO43423 234 aa18.51■□□□□ 0.55
ECM1-202ENST00000369047 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
ECM1-202ENST00000369047 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
ECM1-202ENST00000369047 ANKRD50Q9ULJ7 1429 aa18.51■□□□□ 0.55
ECM1-202ENST00000369047 TRAPPC8Q9Y2L5 1435 aa18.51■□□□□ 0.55
ECM1-202ENST00000369047 MLH3Q9UHC1 1453 aa18.51■□□□□ 0.55
ECM1-202ENST00000369047 C9orf84Q5VXU9 1444 aa18.5■□□□□ 0.55
ECM1-202ENST00000369047 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms