RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
LMNA-203ENST00000368297 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.43
LMNA-203ENST00000368297 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
LMNA-203ENST00000368297 CAMSAP2Q08AD1 1489 aa23.99■■□□□ 1.43
LMNA-203ENST00000368297 ZNF644Q9H582 1327 aaPredicted RBP23.97■■□□□ 1.43
LMNA-203ENST00000368297 PLCH2O75038 1416 aa23.96■■□□□ 1.43
LMNA-203ENST00000368297 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
LMNA-203ENST00000368297 ARAP3Q8WWN8 1544 aa23.91■■□□□ 1.42
LMNA-203ENST00000368297 EFCAB2Q5VUJ9 269 aa23.9■■□□□ 1.42
LMNA-203ENST00000368297 DNMT1P26358 1616 aaKnown RBP23.89■■□□□ 1.41
LMNA-203ENST00000368297 HRCP23327 699 aa23.88■■□□□ 1.41
LMNA-203ENST00000368297 CD109Q6YHK3 1445 aa23.88■■□□□ 1.41
LMNA-203ENST00000368297 GLI2P10070 1586 aa23.87■■□□□ 1.41
LMNA-203ENST00000368297 DIP2BQ9P265 1576 aa23.87■■□□□ 1.41
LMNA-203ENST00000368297 DAPK1P53355 1430 aa23.86■■□□□ 1.41
LMNA-203ENST00000368297 PLEKHH2Q8IVE3 1493 aa23.85■■□□□ 1.41
LMNA-203ENST00000368297 FANCAO15360 1455 aa23.85■■□□□ 1.41
LMNA-203ENST00000368297 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
LMNA-203ENST00000368297 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
LMNA-203ENST00000368297 ABCC5O15440 1437 aa23.84■■□□□ 1.41
LMNA-203ENST00000368297 MAP3K4Q9Y6R4 1608 aa23.83■■□□□ 1.41
LMNA-203ENST00000368297 SYCP2Q9BX26 1530 aa23.83■■□□□ 1.4
LMNA-203ENST00000368297 HNRNPMP52272 730 aaKnown RBP eCLIP23.83■■□□□ 1.4
LMNA-203ENST00000368297 CROCC2H7BZ55 1655 aa23.81■■□□□ 1.4
LMNA-203ENST00000368297 ARHGEF5Q12774 1597 aa23.81■■□□□ 1.4
LMNA-203ENST00000368297 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
LMNA-203ENST00000368297 CFAP74Q9C0B2 1584 aa23.8■■□□□ 1.4
LMNA-203ENST00000368297 ABCC1P33527 1531 aa23.8■■□□□ 1.4
LMNA-203ENST00000368297 KIAA1107Q9UPP5 1409 aa23.79■■□□□ 1.4
LMNA-203ENST00000368297 MBD5Q9P267 1494 aa23.78■■□□□ 1.4
LMNA-203ENST00000368297 CCDC141Q6ZP82 1450 aa23.77■■□□□ 1.4
LMNA-203ENST00000368297 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
LMNA-203ENST00000368297 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
LMNA-203ENST00000368297 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
LMNA-203ENST00000368297 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
LMNA-203ENST00000368297 ARHGEF12Q9NZN5 1544 aa23.74■■□□□ 1.39
LMNA-203ENST00000368297 AKNAQ7Z591 1439 aa23.74■■□□□ 1.39
LMNA-203ENST00000368297 SETD5Q9C0A6 1442 aa23.74■■□□□ 1.39
LMNA-203ENST00000368297 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
LMNA-203ENST00000368297 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
LMNA-203ENST00000368297 SHANK2Q9UPX8 1470 aa23.73■■□□□ 1.39
LMNA-203ENST00000368297 TSPOAP1O95153 1857 aa23.73■■□□□ 1.39
LMNA-203ENST00000368297 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
LMNA-203ENST00000368297 C9orf84Q5VXU9 1444 aa23.71■■□□□ 1.39
LMNA-203ENST00000368297 ROCK1Q13464 1354 aa23.71■■□□□ 1.39
LMNA-203ENST00000368297 HFM1A2PYH4 1435 aa23.71■■□□□ 1.39
LMNA-203ENST00000368297 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
LMNA-203ENST00000368297 NEO1Q92859 1461 aa23.7■■□□□ 1.38
LMNA-203ENST00000368297 GCC2Q8IWJ2 1684 aa23.69■■□□□ 1.38
LMNA-203ENST00000368297 RAB3GAP2Q9H2M9 1393 aa23.69■■□□□ 1.38
LMNA-203ENST00000368297 NAIPQ13075 1403 aa23.68■■□□□ 1.38
LMNA-203ENST00000368297 TRAPPC8Q9Y2L5 1435 aa23.68■■□□□ 1.38
LMNA-203ENST00000368297 ADGRL2O95490 1459 aa23.67■■□□□ 1.38
LMNA-203ENST00000368297 ANKRD30AQ9BXX3 1397 aa23.67■■□□□ 1.38
LMNA-203ENST00000368297 MAST1Q9Y2H9 1570 aa23.66■■□□□ 1.38
LMNA-203ENST00000368297 PPRC1Q5VV67 1664 aaKnown RBP23.66■■□□□ 1.38
LMNA-203ENST00000368297 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
LMNA-203ENST00000368297 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.38
LMNA-203ENST00000368297 NCOA1Q15788 1441 aa23.64■■□□□ 1.37
LMNA-203ENST00000368297 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
LMNA-203ENST00000368297 SPAG9O60271 1321 aaKnown RBP23.61■■□□□ 1.37
LMNA-203ENST00000368297 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
LMNA-203ENST00000368297 TRHP20396 242 aaPredicted RBP23.59■■□□□ 1.37
LMNA-203ENST00000368297 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
LMNA-203ENST00000368297 POGZQ7Z3K3 1410 aa23.59■■□□□ 1.37
LMNA-203ENST00000368297 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
LMNA-203ENST00000368297 MYT1LQ9UL68 1186 aa23.58■■□□□ 1.37
LMNA-203ENST00000368297 PLXNC1O60486 1568 aa23.57■■□□□ 1.36
LMNA-203ENST00000368297 KIF15Q9NS87 1388 aa23.57■■□□□ 1.36
LMNA-203ENST00000368297 KDM6BO15054 1643 aa23.56■■□□□ 1.36
LMNA-203ENST00000368297 ZFYVE16Q7Z3T8 1539 aa23.55■■□□□ 1.36
LMNA-203ENST00000368297 RTEL1-TNFRSF6BF6WH68 1400 aa23.55■■□□□ 1.36
LMNA-203ENST00000368297 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
LMNA-203ENST00000368297 INO80Q9ULG1 1556 aaPredicted RBP23.55■■□□□ 1.36
LMNA-203ENST00000368297 KDM5CP41229 1560 aa23.52■■□□□ 1.36
LMNA-203ENST00000368297 RICTORQ6R327 1708 aa23.52■■□□□ 1.36
LMNA-203ENST00000368297 ANKRD50Q9ULJ7 1429 aa23.51■■□□□ 1.35
LMNA-203ENST00000368297 RAPGEF3O95398 923 aa23.51■■□□□ 1.35
LMNA-203ENST00000368297 HECW2Q9P2P5 1572 aa23.49■■□□□ 1.35
LMNA-203ENST00000368297 DUOX2Q9NRD8 1548 aa23.48■■□□□ 1.35
LMNA-203ENST00000368297 KIDINS220Q9ULH0 1771 aa23.48■■□□□ 1.35
LMNA-203ENST00000368297 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
LMNA-203ENST00000368297 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
LMNA-203ENST00000368297 FRMPD1Q5SYB0 1578 aa23.46■■□□□ 1.35
LMNA-203ENST00000368297 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
LMNA-203ENST00000368297 ACIN1Q9UKV3 1341 aaKnown RBP23.45■■□□□ 1.35
LMNA-203ENST00000368297 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
LMNA-203ENST00000368297 ZMYM4Q5VZL5 1548 aa23.4■■□□□ 1.34
LMNA-203ENST00000368297 ABCA6Q8N139 1617 aa23.39■■□□□ 1.33
LMNA-203ENST00000368297 COL17A1Q9UMD9 1497 aaPredicted RBP23.36■■□□□ 1.33
LMNA-203ENST00000368297 DHX29Q7Z478 1369 aaKnown RBP23.36■■□□□ 1.33
LMNA-203ENST00000368297 A2MP01023 1474 aa23.35■■□□□ 1.33
LMNA-203ENST00000368297 DIP2CQ9Y2E4 1556 aa23.35■■□□□ 1.33
LMNA-203ENST00000368297 MAGI2Q86UL8 1455 aa23.34■■□□□ 1.33
LMNA-203ENST00000368297 UNC13BO14795 1591 aa23.34■■□□□ 1.33
LMNA-203ENST00000368297 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.33
LMNA-203ENST00000368297 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.33
LMNA-203ENST00000368297 NUP155O75694 1391 aa23.32■■□□□ 1.32
LMNA-203ENST00000368297 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
LMNA-203ENST00000368297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.322e-8■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms