RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 UGGT2Q9NYU1 1516 aa9.71□□□□□ -0.85
VTA1-202ENST00000367630 NEFMP07197 916 aa9.71□□□□□ -0.86
VTA1-202ENST00000367630 CHMP4BQ9H444 224 aaKnown RBP9.71□□□□□ -0.86
VTA1-202ENST00000367630 ABCA5Q8WWZ7 1642 aa9.7□□□□□ -0.86
VTA1-202ENST00000367630 SUPT16HQ9Y5B9 1047 aaKnown RBP9.7□□□□□ -0.86
VTA1-202ENST00000367630 MS4A1P11836 297 aa9.7□□□□□ -0.86
VTA1-202ENST00000367630 WASHC2AQ641Q2 1341 aa9.7□□□□□ -0.86
VTA1-202ENST00000367630 WASHC2CQ9Y4E1 1318 aa9.7□□□□□ -0.86
VTA1-202ENST00000367630 KIF15Q9NS87 1388 aa9.7□□□□□ -0.86
VTA1-202ENST00000367630 TROQ12816 1431 aaPredicted RBP9.69□□□□□ -0.86
VTA1-202ENST00000367630 MPHOSPH9Q99550 1183 aa9.69□□□□□ -0.86
VTA1-202ENST00000367630 CFAP44Q96MT7 982 aa9.69□□□□□ -0.86
VTA1-202ENST00000367630 SYNJ2O15056 1496 aa9.68□□□□□ -0.86
VTA1-202ENST00000367630 GCC2Q8IWJ2 1684 aa9.68□□□□□ -0.86
VTA1-202ENST00000367630 RAD54L2Q9Y4B4 1467 aa9.68□□□□□ -0.86
VTA1-202ENST00000367630 EPRSP07814 1512 aaKnown RBP9.68□□□□□ -0.86
VTA1-202ENST00000367630 SHANK2Q9UPX8 1470 aa9.68□□□□□ -0.86
VTA1-202ENST00000367630 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
VTA1-202ENST00000367630 KIF14Q15058 1648 aa9.67□□□□□ -0.86
VTA1-202ENST00000367630 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
VTA1-202ENST00000367630 PNNQ9H307 717 aaKnown RBP9.66□□□□□ -0.86
VTA1-202ENST00000367630 TDRD9Q8NDG6 1382 aaKnown RBP9.66□□□□□ -0.86
VTA1-202ENST00000367630 AAMPQ13685 434 aa9.66□□□□□ -0.86
VTA1-202ENST00000367630 NPM1P06748 294 aaKnown RBP eCLIP9.66□□□□□ -0.86
VTA1-202ENST00000367630 ZBED9Q6R2W3 1325 aa9.66□□□□□ -0.86
VTA1-202ENST00000367630 WDR43Q15061 677 aaKnown RBP eCLIP9.65□□□□□ -0.86
VTA1-202ENST00000367630 UPF2Q9HAU5 1272 aaKnown RBP9.65□□□□□ -0.86
VTA1-202ENST00000367630 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.86
VTA1-202ENST00000367630 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.86
VTA1-202ENST00000367630 TMF1P82094 1093 aa9.65□□□□□ -0.87
VTA1-202ENST00000367630 PPM1GO15355 546 aaPredicted RBP9.64□□□□□ -0.87
VTA1-202ENST00000367630 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
VTA1-202ENST00000367630 DAPK1P53355 1430 aa9.64□□□□□ -0.87
VTA1-202ENST00000367630 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
VTA1-202ENST00000367630 HSPA5P11021 654 aaKnown RBP9.63□□□□□ -0.87
VTA1-202ENST00000367630 KIAA1107Q9UPP5 1409 aa9.63□□□□□ -0.87
VTA1-202ENST00000367630 SNAPC4Q5SXM2 1469 aa9.63□□□□□ -0.87
VTA1-202ENST00000367630 RAPGEF6Q8TEU7 1601 aa9.63□□□□□ -0.87
VTA1-202ENST00000367630 FBLN2P98095 1184 aa9.63□□□□□ -0.87
VTA1-202ENST00000367630 CARD11Q9BXL7 1154 aa9.63□□□□□ -0.87
VTA1-202ENST00000367630 CCDC141Q6ZP82 1450 aa9.62□□□□□ -0.87
VTA1-202ENST00000367630 NAIPQ13075 1403 aa9.62□□□□□ -0.87
VTA1-202ENST00000367630 ADGBQ8N7X0 1667 aa9.62□□□□□ -0.87
VTA1-202ENST00000367630 ARHGEF12Q9NZN5 1544 aa9.62□□□□□ -0.87
VTA1-202ENST00000367630 INSRP06213 1382 aa9.61□□□□□ -0.87
VTA1-202ENST00000367630 CHIC2Q9UKJ5 165 aa9.61□□□□□ -0.87
VTA1-202ENST00000367630 EIF2AK4Q9P2K8 1649 aaKnown RBP9.61□□□□□ -0.87
VTA1-202ENST00000367630 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
VTA1-202ENST00000367630 CFAP53Q96M91 514 aa9.61□□□□□ -0.87
VTA1-202ENST00000367630 TEX14Q8IWB6 1497 aa9.6□□□□□ -0.87
VTA1-202ENST00000367630 WDR62O43379 1518 aa9.6□□□□□ -0.87
VTA1-202ENST00000367630 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
VTA1-202ENST00000367630 BRD4O60885 1362 aaPredicted RBP9.6□□□□□ -0.87
VTA1-202ENST00000367630 EFCAB2Q5VUJ9 269 aa9.6□□□□□ -0.87
VTA1-202ENST00000367630 GRIN2AQ12879 1464 aa9.6□□□□□ -0.87
VTA1-202ENST00000367630 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
VTA1-202ENST00000367630 ZBTB47Q9UFB7 747 aaPredicted RBP9.59□□□□□ -0.87
VTA1-202ENST00000367630 CCDC7Q96M83 1385 aa9.59□□□□□ -0.87
VTA1-202ENST00000367630 FANCIQ9NVI1 1328 aa9.59□□□□□ -0.87
VTA1-202ENST00000367630 MYBBP1AQ9BQG0 1328 aaKnown RBP9.59□□□□□ -0.87
VTA1-202ENST00000367630 DNMT1P26358 1616 aaKnown RBP9.59□□□□□ -0.87
VTA1-202ENST00000367630 SIN3AQ96ST3 1273 aa9.59□□□□□ -0.87
VTA1-202ENST00000367630 MAPKBP1O60336 1514 aa9.59□□□□□ -0.87
VTA1-202ENST00000367630 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
VTA1-202ENST00000367630 BECN1Q14457 450 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 KIAA0556O60303 1618 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 TCERG1O14776 1098 aaKnown RBP9.58□□□□□ -0.88
VTA1-202ENST00000367630 PTMSP20962 102 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 NINLQ9Y2I6 1382 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 NUP160Q12769 1436 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 NUDCQ9Y266 331 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 ADGRL2O95490 1459 aa9.58□□□□□ -0.88
VTA1-202ENST00000367630 ANKRD50Q9ULJ7 1429 aa9.57□□□□□ -0.88
VTA1-202ENST00000367630 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
VTA1-202ENST00000367630 NUP155O75694 1391 aa9.57□□□□□ -0.88
VTA1-202ENST00000367630 RPRD2Q5VT52 1461 aaKnown RBP9.57□□□□□ -0.88
VTA1-202ENST00000367630 PTPRGP23470 1445 aa9.57□□□□□ -0.88
VTA1-202ENST00000367630 NLRP13Q86W25 1043 aa9.56□□□□□ -0.88
VTA1-202ENST00000367630 FAM9BQ8IZU0 186 aa9.56□□□□□ -0.88
VTA1-202ENST00000367630 CAMSAP2Q08AD1 1489 aa9.55□□□□□ -0.88
VTA1-202ENST00000367630 USP47Q96K76 1375 aa9.54□□□□□ -0.88
VTA1-202ENST00000367630 USP35Q9P2H5 1018 aa9.54□□□□□ -0.88
VTA1-202ENST00000367630 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
VTA1-202ENST00000367630 PKD2Q13563 968 aa9.54□□□□□ -0.88
VTA1-202ENST00000367630 BCANQ96GW7 911 aa9.53□□□□□ -0.88
VTA1-202ENST00000367630 C9orf84Q5VXU9 1444 aa9.53□□□□□ -0.88
VTA1-202ENST00000367630 JPH4Q96JJ6 628 aa9.52□□□□□ -0.88
VTA1-202ENST00000367630 SMG6Q86US8 1419 aaKnown RBP9.52□□□□□ -0.89
VTA1-202ENST00000367630 ARHGEF5Q12774 1597 aa9.52□□□□□ -0.89
VTA1-202ENST00000367630 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
VTA1-202ENST00000367630 ZMYM4Q5VZL5 1548 aa9.52□□□□□ -0.89
VTA1-202ENST00000367630 ADCY10Q96PN6 1610 aa9.51□□□□□ -0.89
VTA1-202ENST00000367630 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
VTA1-202ENST00000367630 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
VTA1-202ENST00000367630 RALGAPBQ86X10 1494 aa9.51□□□□□ -0.89
VTA1-202ENST00000367630 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
VTA1-202ENST00000367630 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
VTA1-202ENST00000367630 TARBP1Q13395 1621 aaKnown RBP9.5□□□□□ -0.89
VTA1-202ENST00000367630 CHMP4AQ9BY43 222 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms