RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PTPRGP23470 1445 aa14.7□□□□□ -0.06
VTA1-201ENST00000367621 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
VTA1-201ENST00000367621 PLB1Q6P1J6 1458 aa14.69□□□□□ -0.06
VTA1-201ENST00000367621 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
VTA1-201ENST00000367621 NUP153P49790 1475 aaKnown RBP14.69□□□□□ -0.06
VTA1-201ENST00000367621 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
VTA1-201ENST00000367621 ABCA8O94911 1581 aa14.66□□□□□ -0.06
VTA1-201ENST00000367621 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
VTA1-201ENST00000367621 HECW1Q76N89 1606 aa14.64□□□□□ -0.07
VTA1-201ENST00000367621 C19orf67A6NJJ6 358 aa14.64□□□□□ -0.07
VTA1-201ENST00000367621 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
VTA1-201ENST00000367621 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
VTA1-201ENST00000367621 CDK13Q14004 1512 aaKnown RBP14.63□□□□□ -0.07
VTA1-201ENST00000367621 LRRIQ1Q96JM4 1722 aa14.63□□□□□ -0.07
VTA1-201ENST00000367621 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
VTA1-201ENST00000367621 ARID3CA6NKF2 412 aa14.62□□□□□ -0.07
VTA1-201ENST00000367621 UACAQ9BZF9 1416 aa14.61□□□□□ -0.07
VTA1-201ENST00000367621 ATP10BO94823 1461 aa14.59□□□□□ -0.07
VTA1-201ENST00000367621 PHLDB1Q86UU1 1377 aa14.59□□□□□ -0.07
VTA1-201ENST00000367621 MTUS2Q5JR59 1369 aa14.58□□□□□ -0.08
VTA1-201ENST00000367621 RRBP1Q9P2E9 1410 aaKnown RBP14.56□□□□□ -0.08
VTA1-201ENST00000367621 UHRF1BP1LA0JNW5 1464 aa14.56□□□□□ -0.08
VTA1-201ENST00000367621 ARHGEF11O15085 1522 aa14.55□□□□□ -0.08
VTA1-201ENST00000367621 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
VTA1-201ENST00000367621 ABCC2Q92887 1545 aa14.54□□□□□ -0.08
VTA1-201ENST00000367621 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
VTA1-201ENST00000367621 TROQ12816 1431 aaPredicted RBP14.51□□□□□ -0.09
VTA1-201ENST00000367621 CDK11AQ9UQ88 783 aaPredicted RBP14.51□□□□□ -0.09
VTA1-201ENST00000367621 CCNB3Q8WWL7 1395 aa14.5□□□□□ -0.09
VTA1-201ENST00000367621 PRR29P0C7W0 189 aa14.49□□□□□ -0.09
VTA1-201ENST00000367621 KDM5BQ9UGL1 1544 aa14.49□□□□□ -0.09
VTA1-201ENST00000367621 PLEKHD1A6NEE1 506 aa14.48□□□□□ -0.09
VTA1-201ENST00000367621 GABBR2O75899 941 aa14.47□□□□□ -0.09
VTA1-201ENST00000367621 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
VTA1-201ENST00000367621 MYOM3Q5VTT5 1437 aa14.46□□□□□ -0.09
VTA1-201ENST00000367621 FGD6Q6ZV73 1430 aa14.46□□□□□ -0.09
VTA1-201ENST00000367621 ADCY10Q96PN6 1610 aa14.44□□□□□ -0.1
VTA1-201ENST00000367621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.44□□□□□ -0.1
VTA1-201ENST00000367621 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
VTA1-201ENST00000367621 SUPT6HQ7KZ85 1726 aaKnown RBP14.44□□□□□ -0.1
VTA1-201ENST00000367621 KIF14Q15058 1648 aa14.41□□□□□ -0.1
VTA1-201ENST00000367621 GPATCH8Q9UKJ3 1502 aaKnown RBP14.4□□□□□ -0.1
VTA1-201ENST00000367621 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
VTA1-201ENST00000367621 TCOF1Q13428 1488 aaKnown RBP14.39□□□□□ -0.11
VTA1-201ENST00000367621 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
VTA1-201ENST00000367621 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
VTA1-201ENST00000367621 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
VTA1-201ENST00000367621 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
VTA1-201ENST00000367621 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
VTA1-201ENST00000367621 DNAJC5Q9H3Z4 198 aa14.37□□□□□ -0.11
VTA1-201ENST00000367621 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
VTA1-201ENST00000367621 PTPRKQ15262 1439 aa14.35□□□□□ -0.11
VTA1-201ENST00000367621 ZNF644Q9H582 1327 aaPredicted RBP14.35□□□□□ -0.11
VTA1-201ENST00000367621 ASXL2Q76L83 1435 aa14.33□□□□□ -0.11
VTA1-201ENST00000367621 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.12
VTA1-201ENST00000367621 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
VTA1-201ENST00000367621 CFDP1Q9UEE9 299 aaPredicted RBP14.33□□□□□ -0.12
VTA1-201ENST00000367621 PTPN23Q9H3S7 1636 aa14.33□□□□□ -0.12
VTA1-201ENST00000367621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.12
VTA1-201ENST00000367621 ITGAEP38570 1179 aa14.32□□□□□ -0.12
VTA1-201ENST00000367621 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
VTA1-201ENST00000367621 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
VTA1-201ENST00000367621 TTC37Q6PGP7 1564 aa14.29□□□□□ -0.12
VTA1-201ENST00000367621 ABCC5O15440 1437 aa14.27□□□□□ -0.12
VTA1-201ENST00000367621 PLCH2O75038 1416 aa14.27□□□□□ -0.12
VTA1-201ENST00000367621 CLCN6P51797 869 aa14.27□□□□□ -0.13
VTA1-201ENST00000367621 CAMSAP2Q08AD1 1489 aa14.26□□□□□ -0.13
VTA1-201ENST00000367621 CDC42BPAQ5VT25 1732 aa14.25□□□□□ -0.13
VTA1-201ENST00000367621 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
VTA1-201ENST00000367621 LHX8Q68G74 356 aa14.25□□□□□ -0.13
VTA1-201ENST00000367621 ZNF777Q9ULD5 760 aaPredicted RBP14.25□□□□□ -0.13
VTA1-201ENST00000367621 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
VTA1-201ENST00000367621 DAPK1P53355 1430 aa14.24□□□□□ -0.13
VTA1-201ENST00000367621 ITSN2Q9NZM3 1697 aa14.23□□□□□ -0.13
VTA1-201ENST00000367621 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
VTA1-201ENST00000367621 SETD5Q9C0A6 1442 aa14.23□□□□□ -0.13
VTA1-201ENST00000367621 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
VTA1-201ENST00000367621 HRCP23327 699 aa14.21□□□□□ -0.13
VTA1-201ENST00000367621 HFM1A2PYH4 1435 aa14.21□□□□□ -0.13
VTA1-201ENST00000367621 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
VTA1-201ENST00000367621 RAB3GAP2Q9H2M9 1393 aa14.21□□□□□ -0.14
VTA1-201ENST00000367621 ABCA9Q8IUA7 1624 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 HNRNPMP52272 730 aaKnown RBP eCLIP14.2□□□□□ -0.14
VTA1-201ENST00000367621 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 NAIPQ13075 1403 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 CDC42BPBQ9Y5S2 1711 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
VTA1-201ENST00000367621 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
VTA1-201ENST00000367621 KIAA1107Q9UPP5 1409 aa14.19□□□□□ -0.14
VTA1-201ENST00000367621 ARHGAP5Q13017 1502 aa14.19□□□□□ -0.14
VTA1-201ENST00000367621 ARHGEF12Q9NZN5 1544 aa14.19□□□□□ -0.14
VTA1-201ENST00000367621 ROCK1Q13464 1354 aa14.19□□□□□ -0.14
VTA1-201ENST00000367621 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
VTA1-201ENST00000367621 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
VTA1-201ENST00000367621 ARHGEF5Q12774 1597 aa14.16□□□□□ -0.14
VTA1-201ENST00000367621 ADGRL2O95490 1459 aa14.15□□□□□ -0.14
VTA1-201ENST00000367621 PLEKHH2Q8IVE3 1493 aa14.15□□□□□ -0.14
VTA1-201ENST00000367621 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms