RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 USP35Q9P2H5 1018 aa10.55□□□□□ -0.72
SHPRH-203ENST00000367505 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
SHPRH-203ENST00000367505 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
SHPRH-203ENST00000367505 GBP4Q96PP9 640 aa10.54□□□□□ -0.72
SHPRH-203ENST00000367505 PHLDB1Q86UU1 1377 aa10.54□□□□□ -0.72
SHPRH-203ENST00000367505 CHAF1AQ13111 956 aaPredicted RBP10.54□□□□□ -0.72
SHPRH-203ENST00000367505 POGKQ9P215 609 aa10.54□□□□□ -0.72
SHPRH-203ENST00000367505 MCCP23508 829 aa10.53□□□□□ -0.72
SHPRH-203ENST00000367505 PKD2Q13563 968 aa10.53□□□□□ -0.72
SHPRH-203ENST00000367505 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.72
SHPRH-203ENST00000367505 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
SHPRH-203ENST00000367505 MORC1Q86VD1 984 aa10.52□□□□□ -0.73
SHPRH-203ENST00000367505 NLRP13Q86W25 1043 aa10.51□□□□□ -0.73
SHPRH-203ENST00000367505 DHX57Q6P158 1386 aaKnown RBP10.51□□□□□ -0.73
SHPRH-203ENST00000367505 EIF4G1Q04637 1599 aaKnown RBP10.51□□□□□ -0.73
SHPRH-203ENST00000367505 PMFBP1Q8TBY8 1022 aa10.51□□□□□ -0.73
SHPRH-203ENST00000367505 ANKRD30AQ9BXX3 1397 aa10.5□□□□□ -0.73
SHPRH-203ENST00000367505 CALD1Q05682 793 aaKnown RBP10.5□□□□□ -0.73
SHPRH-203ENST00000367505 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
SHPRH-203ENST00000367505 C14orf37Q86TY3 774 aa10.48□□□□□ -0.73
SHPRH-203ENST00000367505 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
SHPRH-203ENST00000367505 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
SHPRH-203ENST00000367505 CARMIL2Q6F5E8 1435 aa10.47□□□□□ -0.73
SHPRH-203ENST00000367505 KCNJ4P48050 445 aa10.47□□□□□ -0.73
SHPRH-203ENST00000367505 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
SHPRH-203ENST00000367505 L3MBTL2Q969R5 705 aa10.47□□□□□ -0.73
SHPRH-203ENST00000367505 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
SHPRH-203ENST00000367505 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
SHPRH-203ENST00000367505 WIZO95785 1651 aa10.47□□□□□ -0.73
SHPRH-203ENST00000367505 NUP155O75694 1391 aa10.46□□□□□ -0.73
SHPRH-203ENST00000367505 FGD1P98174 961 aa10.46□□□□□ -0.73
SHPRH-203ENST00000367505 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.73
SHPRH-203ENST00000367505 KIF15Q9NS87 1388 aa10.46□□□□□ -0.74
SHPRH-203ENST00000367505 OS9Q13438 667 aaPredicted RBP10.46□□□□□ -0.74
SHPRH-203ENST00000367505 PLPPR3Q6T4P5 718 aa10.46□□□□□ -0.74
SHPRH-203ENST00000367505 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
SHPRH-203ENST00000367505 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-203ENST00000367505 HDGFP51858 240 aaKnown RBP10.45□□□□□ -0.74
SHPRH-203ENST00000367505 GOLGA6L3A6NEY3 463 aa10.44□□□□□ -0.74
SHPRH-203ENST00000367505 CHMP4AQ9BY43 222 aa10.44□□□□□ -0.74
SHPRH-203ENST00000367505 KIAA2012Q0VF49 1180 aa10.44□□□□□ -0.74
SHPRH-203ENST00000367505 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
SHPRH-203ENST00000367505 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
SHPRH-203ENST00000367505 SRPK2P78362 688 aaKnown RBP10.43□□□□□ -0.74
SHPRH-203ENST00000367505 FOXD1Q16676 465 aa10.43□□□□□ -0.74
SHPRH-203ENST00000367505 ZBTB7CA1YPR0 619 aa10.43□□□□□ -0.74
SHPRH-203ENST00000367505 CENPQQ7L2Z9 268 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-203ENST00000367505 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-203ENST00000367505 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-203ENST00000367505 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-203ENST00000367505 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-203ENST00000367505 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
SHPRH-203ENST00000367505 KIAA1211Q6ZU35 1233 aa10.4□□□□□ -0.74
SHPRH-203ENST00000367505 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
SHPRH-203ENST00000367505 TPRNQ4KMQ1 711 aa10.4□□□□□ -0.74
SHPRH-203ENST00000367505 NGEFQ8N5V2 710 aa10.4□□□□□ -0.74
SHPRH-203ENST00000367505 PDS5BQ9NTI5 1447 aa10.4□□□□□ -0.74
SHPRH-203ENST00000367505 ERCC6Q03468 1493 aa10.4□□□□□ -0.74
SHPRH-203ENST00000367505 CENPJQ9HC77 1338 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-203ENST00000367505 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
SHPRH-203ENST00000367505 ITPRIPQ8IWB1 547 aa10.4□□□□□ -0.75
SHPRH-203ENST00000367505 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
SHPRH-203ENST00000367505 RTF1Q92541 710 aaKnown RBP10.39□□□□□ -0.75
SHPRH-203ENST00000367505 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
SHPRH-203ENST00000367505 PDE4AP27815 886 aa10.38□□□□□ -0.75
SHPRH-203ENST00000367505 EFCAB2Q5VUJ9 269 aa10.38□□□□□ -0.75
SHPRH-203ENST00000367505 SENP3Q9H4L4 574 aaPredicted RBP10.38□□□□□ -0.75
SHPRH-203ENST00000367505 DRC7Q8IY82 874 aa10.38□□□□□ -0.75
SHPRH-203ENST00000367505 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
SHPRH-203ENST00000367505 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
SHPRH-203ENST00000367505 HDAC5Q9UQL6 1122 aa10.37□□□□□ -0.75
SHPRH-203ENST00000367505 HMMRO75330 724 aa10.37□□□□□ -0.75
SHPRH-203ENST00000367505 GZF1Q9H116 711 aaPredicted RBP10.37□□□□□ -0.75
SHPRH-203ENST00000367505 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
SHPRH-203ENST00000367505 SMC4Q9NTJ3 1288 aa10.37□□□□□ -0.75
SHPRH-203ENST00000367505 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
SHPRH-203ENST00000367505 CGNL1Q0VF96 1302 aa10.36□□□□□ -0.75
SHPRH-203ENST00000367505 GSE1Q14687 1217 aa10.36□□□□□ -0.75
SHPRH-203ENST00000367505 MFAP1P55081 439 aaKnown RBP10.36□□□□□ -0.75
SHPRH-203ENST00000367505 PHF14O94880 888 aa10.35□□□□□ -0.75
SHPRH-203ENST00000367505 LMOD3Q0VAK6 560 aa10.35□□□□□ -0.75
SHPRH-203ENST00000367505 SKOR2Q2VWA4 1001 aaPredicted RBP10.35□□□□□ -0.75
SHPRH-203ENST00000367505 TERF2IPQ9NYB0 399 aa10.35□□□□□ -0.75
SHPRH-203ENST00000367505 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
SHPRH-203ENST00000367505 E9PSI1 815 aa10.34□□□□□ -0.75
SHPRH-203ENST00000367505 NAP1L2Q9ULW6 460 aaPredicted RBP10.34□□□□□ -0.75
SHPRH-203ENST00000367505 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
SHPRH-203ENST00000367505 ST18O60284 1047 aa10.33□□□□□ -0.76
SHPRH-203ENST00000367505 A0A0G2JS52 829 aa10.33□□□□□ -0.76
SHPRH-203ENST00000367505 TDRD9Q8NDG6 1382 aaKnown RBP10.33□□□□□ -0.76
SHPRH-203ENST00000367505 USP47Q96K76 1375 aa10.32□□□□□ -0.76
SHPRH-203ENST00000367505 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
SHPRH-203ENST00000367505 CCDC144AA2RUR9 1427 aa10.32□□□□□ -0.76
SHPRH-203ENST00000367505 SPAG9O60271 1321 aaKnown RBP10.32□□□□□ -0.76
SHPRH-203ENST00000367505 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
SHPRH-203ENST00000367505 UACAQ9BZF9 1416 aa10.31□□□□□ -0.76
SHPRH-203ENST00000367505 AAMPQ13685 434 aa10.31□□□□□ -0.76
SHPRH-203ENST00000367505 GPATCH3Q96I76 525 aa10.31□□□□□ -0.76
SHPRH-203ENST00000367505 RUSC2Q8N2Y8 1516 aa10.3□□□□□ -0.76
SHPRH-203ENST00000367505 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms