RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 FRAT1Q92837 279 aaPredicted RBP15.63■□□□□ 0.09
SHPRH-202ENST00000367503 TMF1P82094 1093 aa15.63■□□□□ 0.09
SHPRH-202ENST00000367503 CHMP4BQ9H444 224 aaKnown RBP15.63■□□□□ 0.09
SHPRH-202ENST00000367503 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
SHPRH-202ENST00000367503 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
SHPRH-202ENST00000367503 CC2D1BQ5T0F9 858 aaKnown RBP15.61■□□□□ 0.09
SHPRH-202ENST00000367503 NEUROD2Q15784 382 aa15.61■□□□□ 0.09
SHPRH-202ENST00000367503 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
SHPRH-202ENST00000367503 DCAF11Q8TEB1 546 aa15.6■□□□□ 0.09
SHPRH-202ENST00000367503 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
SHPRH-202ENST00000367503 SLC4A3P48751 1232 aa15.59■□□□□ 0.09
SHPRH-202ENST00000367503 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
SHPRH-202ENST00000367503 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
SHPRH-202ENST00000367503 TNNT3P45378 269 aaPredicted RBP15.57■□□□□ 0.08
SHPRH-202ENST00000367503 BRPF3Q9ULD4 1205 aa15.57■□□□□ 0.08
SHPRH-202ENST00000367503 RALBP1Q15311 655 aa15.55■□□□□ 0.08
SHPRH-202ENST00000367503 ZRSR1Q15695 479 aaKnown RBP15.55■□□□□ 0.08
SHPRH-202ENST00000367503 DHX57Q6P158 1386 aaKnown RBP15.55■□□□□ 0.08
SHPRH-202ENST00000367503 GOLGA6L6A8MZA4 724 aa15.54■□□□□ 0.08
SHPRH-202ENST00000367503 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
SHPRH-202ENST00000367503 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
SHPRH-202ENST00000367503 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
SHPRH-202ENST00000367503 ZBED9Q6R2W3 1325 aa15.53■□□□□ 0.08
SHPRH-202ENST00000367503 NFKBIBQ15653 356 aa15.52■□□□□ 0.08
SHPRH-202ENST00000367503 DDX11L8A8MPP1 907 aa15.52■□□□□ 0.07
SHPRH-202ENST00000367503 FMN1Q68DA7 1419 aa15.52■□□□□ 0.07
SHPRH-202ENST00000367503 FAM161AQ3B820 660 aa15.51■□□□□ 0.07
SHPRH-202ENST00000367503 FAM43AQ8N2R8 423 aa15.51■□□□□ 0.07
SHPRH-202ENST00000367503 PKD2Q13563 968 aa15.51■□□□□ 0.07
SHPRH-202ENST00000367503 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
SHPRH-202ENST00000367503 NRDCO43847 1150 aa15.5■□□□□ 0.07
SHPRH-202ENST00000367503 UBE2Q2Q8WVN8 375 aa15.5■□□□□ 0.07
SHPRH-202ENST00000367503 MSH5O43196 834 aa15.49■□□□□ 0.07
SHPRH-202ENST00000367503 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
SHPRH-202ENST00000367503 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
SHPRH-202ENST00000367503 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
SHPRH-202ENST00000367503 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
SHPRH-202ENST00000367503 EXOC6Q8TAG9 804 aa15.46■□□□□ 0.07
SHPRH-202ENST00000367503 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
SHPRH-202ENST00000367503 L3MBTL2Q969R5 705 aa15.46■□□□□ 0.06
SHPRH-202ENST00000367503 CFAP44Q96MT7 982 aa15.45■□□□□ 0.06
SHPRH-202ENST00000367503 FOXD1Q16676 465 aa15.45■□□□□ 0.06
SHPRH-202ENST00000367503 U2SURPO15042 1029 aaKnown RBP15.45■□□□□ 0.06
SHPRH-202ENST00000367503 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
SHPRH-202ENST00000367503 RRP1P56182 461 aaKnown RBP15.44■□□□□ 0.06
SHPRH-202ENST00000367503 MFAP1P55081 439 aaKnown RBP15.44■□□□□ 0.06
SHPRH-202ENST00000367503 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
SHPRH-202ENST00000367503 POGKQ9P215 609 aa15.44■□□□□ 0.06
SHPRH-202ENST00000367503 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
SHPRH-202ENST00000367503 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
SHPRH-202ENST00000367503 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
SHPRH-202ENST00000367503 MORC1Q86VD1 984 aa15.43■□□□□ 0.06
SHPRH-202ENST00000367503 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
SHPRH-202ENST00000367503 PLPPR3Q6T4P5 718 aa15.42■□□□□ 0.06
SHPRH-202ENST00000367503 SKOR2Q2VWA4 1001 aaPredicted RBP15.42■□□□□ 0.06
SHPRH-202ENST00000367503 NLRP13Q86W25 1043 aa15.42■□□□□ 0.06
SHPRH-202ENST00000367503 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
SHPRH-202ENST00000367503 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
SHPRH-202ENST00000367503 MAP7D2Q96T17 732 aa15.41■□□□□ 0.06
SHPRH-202ENST00000367503 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
SHPRH-202ENST00000367503 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
SHPRH-202ENST00000367503 GOLGA6L4A6NEF3 574 aa15.4■□□□□ 0.06
SHPRH-202ENST00000367503 KANK1Q14678 1352 aa15.4■□□□□ 0.06
SHPRH-202ENST00000367503 TPM2P07951 284 aa15.4■□□□□ 0.06
SHPRH-202ENST00000367503 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
SHPRH-202ENST00000367503 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
SHPRH-202ENST00000367503 IPO8O15397 1037 aaKnown RBP15.39■□□□□ 0.05
SHPRH-202ENST00000367503 WIZO95785 1651 aa15.39■□□□□ 0.05
SHPRH-202ENST00000367503 NUP155O75694 1391 aa15.39■□□□□ 0.05
SHPRH-202ENST00000367503 RRP9O43818 475 aaKnown RBP15.39■□□□□ 0.05
SHPRH-202ENST00000367503 ZNF771Q7L3S4 317 aaPredicted RBP15.39■□□□□ 0.05
SHPRH-202ENST00000367503 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
SHPRH-202ENST00000367503 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
SHPRH-202ENST00000367503 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
SHPRH-202ENST00000367503 MTERF4Q7Z6M4 381 aaKnown RBP15.37■□□□□ 0.05
SHPRH-202ENST00000367503 MCCP23508 829 aa15.36■□□□□ 0.05
SHPRH-202ENST00000367503 GOLGA2Q08379 1002 aa15.36■□□□□ 0.05
SHPRH-202ENST00000367503 MRE11P49959 708 aa15.35■□□□□ 0.05
SHPRH-202ENST00000367503 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
SHPRH-202ENST00000367503 PHLDB1Q86UU1 1377 aa15.35■□□□□ 0.05
SHPRH-202ENST00000367503 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
SHPRH-202ENST00000367503 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
SHPRH-202ENST00000367503 PLIN1O60240 522 aa15.32■□□□□ 0.04
SHPRH-202ENST00000367503 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
SHPRH-202ENST00000367503 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
SHPRH-202ENST00000367503 KIF15Q9NS87 1388 aa15.31■□□□□ 0.04
SHPRH-202ENST00000367503 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
SHPRH-202ENST00000367503 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
SHPRH-202ENST00000367503 PHF14O94880 888 aa15.3■□□□□ 0.04
SHPRH-202ENST00000367503 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
SHPRH-202ENST00000367503 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
SHPRH-202ENST00000367503 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
SHPRH-202ENST00000367503 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
SHPRH-202ENST00000367503 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
SHPRH-202ENST00000367503 KCNJ4P48050 445 aa15.28■□□□□ 0.04
SHPRH-202ENST00000367503 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
SHPRH-202ENST00000367503 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
SHPRH-202ENST00000367503 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
SHPRH-202ENST00000367503 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
SHPRH-202ENST00000367503 FGD1P98174 961 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms