RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
CD46-209ENST00000367047 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.65
CD46-209ENST00000367047 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.65
CD46-209ENST00000367047 ESPNB1AK53 854 aa10.95□□□□□ -0.66
CD46-209ENST00000367047 ARID3AQ99856 593 aa10.95□□□□□ -0.66
CD46-209ENST00000367047 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
CD46-209ENST00000367047 PLIN1O60240 522 aa10.95□□□□□ -0.66
CD46-209ENST00000367047 TPM2P07951 284 aa10.95□□□□□ -0.66
CD46-209ENST00000367047 ZHX1Q9UKY1 873 aaPredicted RBP10.95□□□□□ -0.66
CD46-209ENST00000367047 POLR3GLQ9BT43 218 aa10.94□□□□□ -0.66
CD46-209ENST00000367047 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
CD46-209ENST00000367047 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
CD46-209ENST00000367047 CCDC7Q96M83 1385 aa10.92□□□□□ -0.66
CD46-209ENST00000367047 KIAA1211Q6ZU35 1233 aa10.92□□□□□ -0.66
CD46-209ENST00000367047 MYH16Q9H6N6 1097 aa10.92□□□□□ -0.66
CD46-209ENST00000367047 FAM13BQ9NYF5 915 aa10.91□□□□□ -0.66
CD46-209ENST00000367047 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
CD46-209ENST00000367047 TRIM44Q96DX7 344 aaPredicted RBP10.9□□□□□ -0.66
CD46-209ENST00000367047 CHMP4BQ9H444 224 aaKnown RBP10.9□□□□□ -0.66
CD46-209ENST00000367047 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
CD46-209ENST00000367047 CRBNQ96SW2 442 aa10.9□□□□□ -0.66
CD46-209ENST00000367047 NAP1L2Q9ULW6 460 aaPredicted RBP10.9□□□□□ -0.66
CD46-209ENST00000367047 PRDM10Q9NQV6 1147 aa10.9□□□□□ -0.67
CD46-209ENST00000367047 NCOA2Q15596 1464 aa10.89□□□□□ -0.67
CD46-209ENST00000367047 FSD2A1L4K1 749 aa10.88□□□□□ -0.67
CD46-209ENST00000367047 PHLDB1Q86UU1 1377 aa10.88□□□□□ -0.67
CD46-209ENST00000367047 ATP1B4Q9UN42 357 aaPredicted RBP10.88□□□□□ -0.67
CD46-209ENST00000367047 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
CD46-209ENST00000367047 PNISRQ8TF01 805 aaKnown RBP10.87□□□□□ -0.67
CD46-209ENST00000367047 CANXP27824 592 aaKnown RBP10.86□□□□□ -0.67
CD46-209ENST00000367047 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
CD46-209ENST00000367047 MRE11P49959 708 aa10.86□□□□□ -0.67
CD46-209ENST00000367047 SMARCA4P51532 1647 aa10.85□□□□□ -0.67
CD46-209ENST00000367047 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
CD46-209ENST00000367047 BECN1Q14457 450 aa10.85□□□□□ -0.67
CD46-209ENST00000367047 RIPK4P57078 832 aa10.84□□□□□ -0.67
CD46-209ENST00000367047 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
CD46-209ENST00000367047 STAC3Q96MF2 364 aa10.84□□□□□ -0.67
CD46-209ENST00000367047 NCOA1Q15788 1441 aa10.84□□□□□ -0.67
CD46-209ENST00000367047 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
CD46-209ENST00000367047 GRPEL1Q9HAV7 217 aa10.83□□□□□ -0.68
CD46-209ENST00000367047 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
CD46-209ENST00000367047 SYNJ1O43426 1573 aa10.83□□□□□ -0.68
CD46-209ENST00000367047 KTN1Q86UP2 1357 aaKnown RBP10.83□□□□□ -0.68
CD46-209ENST00000367047 TAF7LQ5H9L4 462 aa10.82□□□□□ -0.68
CD46-209ENST00000367047 C20orf194Q5TEA3 1177 aa10.82□□□□□ -0.68
CD46-209ENST00000367047 TRAK2O60296 914 aa10.81□□□□□ -0.68
CD46-209ENST00000367047 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
CD46-209ENST00000367047 MCM4P33991 863 aa10.81□□□□□ -0.68
CD46-209ENST00000367047 MAP7D2Q96T17 732 aa10.81□□□□□ -0.68
CD46-209ENST00000367047 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
CD46-209ENST00000367047 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
CD46-209ENST00000367047 CENPQQ7L2Z9 268 aaPredicted RBP10.81□□□□□ -0.68
CD46-209ENST00000367047 L3MBTL2Q969R5 705 aa10.81□□□□□ -0.68
CD46-209ENST00000367047 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
CD46-209ENST00000367047 R3HCC1Q9Y3T6 440 aaKnown RBP10.8□□□□□ -0.68
CD46-209ENST00000367047 ANTXR1Q9H6X2 564 aa10.79□□□□□ -0.68
CD46-209ENST00000367047 KDM2BQ8NHM5 1336 aa10.79□□□□□ -0.68
CD46-209ENST00000367047 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
CD46-209ENST00000367047 SEC24BO95487 1268 aa10.78□□□□□ -0.68
CD46-209ENST00000367047 KDM5BQ9UGL1 1544 aa10.78□□□□□ -0.68
CD46-209ENST00000367047 VGLL3A8MV65 326 aa10.78□□□□□ -0.68
CD46-209ENST00000367047 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.68
CD46-209ENST00000367047 USP19O94966 1318 aa10.77□□□□□ -0.69
CD46-209ENST00000367047 OFD1O75665 1012 aa10.77□□□□□ -0.69
CD46-209ENST00000367047 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
CD46-209ENST00000367047 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.69
CD46-209ENST00000367047 UACAQ9BZF9 1416 aa10.77□□□□□ -0.69
CD46-209ENST00000367047 ANP32BQ92688 251 aaKnown RBP10.76□□□□□ -0.69
CD46-209ENST00000367047 ARHGAP35Q9NRY4 1499 aa10.76□□□□□ -0.69
CD46-209ENST00000367047 TNNT2P45379 298 aaPredicted RBP10.76□□□□□ -0.69
CD46-209ENST00000367047 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
CD46-209ENST00000367047 MSNP26038 577 aaKnown RBP10.75□□□□□ -0.69
CD46-209ENST00000367047 NBPF8Q3BBV2 869 aa10.75□□□□□ -0.69
CD46-209ENST00000367047 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.75□□□□□ -0.69
CD46-209ENST00000367047 DHX29Q7Z478 1369 aaKnown RBP10.75□□□□□ -0.69
CD46-209ENST00000367047 DMTNQ08495 405 aa10.75□□□□□ -0.69
CD46-209ENST00000367047 FOXD1Q16676 465 aa10.75□□□□□ -0.69
CD46-209ENST00000367047 IPO4Q8TEX9 1081 aaKnown RBP10.75□□□□□ -0.69
CD46-209ENST00000367047 LRRC9Q6ZRR7 1453 aa10.75□□□□□ -0.69
CD46-209ENST00000367047 UQCRHLA0A096LP55 91 aa10.74□□□□□ -0.69
CD46-209ENST00000367047 UQCRHP07919 91 aa10.74□□□□□ -0.69
CD46-209ENST00000367047 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
CD46-209ENST00000367047 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.695e-23■■■■■ 36
CD46-209ENST00000367047 ZSCAN30Q86W11 494 aa10.73□□□□□ -0.69
CD46-209ENST00000367047 GAS2L3Q86XJ1 694 aa10.73□□□□□ -0.69
CD46-209ENST00000367047 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
CD46-209ENST00000367047 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
CD46-209ENST00000367047 P3H3Q8IVL6 736 aa10.72□□□□□ -0.69
CD46-209ENST00000367047 TMEM51Q9NW97 253 aa10.72□□□□□ -0.69
CD46-209ENST00000367047 PRXQ9BXM0 1461 aa10.72□□□□□ -0.69
CD46-209ENST00000367047 ZSCAN20P17040 1043 aaPredicted RBP10.72□□□□□ -0.69
CD46-209ENST00000367047 ZNF830Q96NB3 372 aaPredicted RBP10.71□□□□□ -0.69
CD46-209ENST00000367047 TIAM1Q13009 1591 aa10.71□□□□□ -0.7
CD46-209ENST00000367047 MTERF4Q7Z6M4 381 aaKnown RBP10.7□□□□□ -0.7
CD46-209ENST00000367047 TERF1P54274 439 aa10.7□□□□□ -0.7
CD46-209ENST00000367047 RRP7BPQ9NSQ0 103 aa10.7□□□□□ -0.7
CD46-209ENST00000367047 LRPPRCP42704 1394 aaKnown RBP10.69□□□□□ -0.7
CD46-209ENST00000367047 XPCQ01831 940 aaPredicted RBP10.69□□□□□ -0.7
CD46-209ENST00000367047 UPF2Q9HAU5 1272 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms