RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 MAP3K4Q9Y6R4 1608 aa14.51□□□□□ -0.09
CNIH4-202ENST00000366857 CARMIL2Q6F5E8 1435 aa14.51□□□□□ -0.09
CNIH4-202ENST00000366857 UACAQ9BZF9 1416 aa14.51□□□□□ -0.09
CNIH4-202ENST00000366857 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
CNIH4-202ENST00000366857 MAGI2Q86UL8 1455 aa14.5□□□□□ -0.09
CNIH4-202ENST00000366857 CAMSAP2Q08AD1 1489 aa14.5□□□□□ -0.09
CNIH4-202ENST00000366857 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
CNIH4-202ENST00000366857 ROCK1Q13464 1354 aa14.48□□□□□ -0.09
CNIH4-202ENST00000366857 ABCC5O15440 1437 aa14.47□□□□□ -0.09
CNIH4-202ENST00000366857 ABCC1P33527 1531 aa14.47□□□□□ -0.09
CNIH4-202ENST00000366857 DAPK1P53355 1430 aa14.46□□□□□ -0.09
CNIH4-202ENST00000366857 ARHGEF12Q9NZN5 1544 aa14.45□□□□□ -0.1
CNIH4-202ENST00000366857 POLR1AO95602 1720 aaPredicted RBP14.43□□□□□ -0.1
CNIH4-202ENST00000366857 VWDEQ8N2E2 1590 aa14.43□□□□□ -0.1
CNIH4-202ENST00000366857 MROH1Q8NDA8 1641 aa14.42□□□□□ -0.1
CNIH4-202ENST00000366857 GLI2P10070 1586 aa14.42□□□□□ -0.1
CNIH4-202ENST00000366857 PTPRGP23470 1445 aa14.41□□□□□ -0.1
CNIH4-202ENST00000366857 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
CNIH4-202ENST00000366857 CLSPNQ9HAW4 1339 aa14.4□□□□□ -0.1
CNIH4-202ENST00000366857 IQGAP3Q86VI3 1631 aa14.4□□□□□ -0.1
CNIH4-202ENST00000366857 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
CNIH4-202ENST00000366857 SETD5Q9C0A6 1442 aa14.4□□□□□ -0.1
CNIH4-202ENST00000366857 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
CNIH4-202ENST00000366857 KDM5CP41229 1560 aa14.39□□□□□ -0.11
CNIH4-202ENST00000366857 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
CNIH4-202ENST00000366857 EIF2AK4Q9P2K8 1649 aaKnown RBP14.38□□□□□ -0.11
CNIH4-202ENST00000366857 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
CNIH4-202ENST00000366857 PZPP20742 1482 aa14.37□□□□□ -0.11
CNIH4-202ENST00000366857 FRMPD1Q5SYB0 1578 aa14.36□□□□□ -0.11
CNIH4-202ENST00000366857 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
CNIH4-202ENST00000366857 KIAA1107Q9UPP5 1409 aa14.34□□□□□ -0.11
CNIH4-202ENST00000366857 RNF17Q9BXT8 1623 aaKnown RBP14.34□□□□□ -0.11
CNIH4-202ENST00000366857 NCOA1Q15788 1441 aa14.33□□□□□ -0.12
CNIH4-202ENST00000366857 SIGLEC1Q9BZZ2 1709 aa14.33□□□□□ -0.12
CNIH4-202ENST00000366857 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
CNIH4-202ENST00000366857 MTUS2Q5JR59 1369 aa14.32□□□□□ -0.12
CNIH4-202ENST00000366857 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
CNIH4-202ENST00000366857 NEURL4Q96JN8 1562 aa14.31□□□□□ -0.12
CNIH4-202ENST00000366857 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
CNIH4-202ENST00000366857 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
CNIH4-202ENST00000366857 PLCH2O75038 1416 aa14.3□□□□□ -0.12
CNIH4-202ENST00000366857 DIP2BQ9P265 1576 aa14.28□□□□□ -0.12
CNIH4-202ENST00000366857 RANGAP1P46060 587 aaPredicted RBP14.27□□□□□ -0.13
CNIH4-202ENST00000366857 E9PCH4 1651 aa14.26□□□□□ -0.13
CNIH4-202ENST00000366857 CEP152O94986 1710 aa14.26□□□□□ -0.13
CNIH4-202ENST00000366857 TEX14Q8IWB6 1497 aa14.25□□□□□ -0.13
CNIH4-202ENST00000366857 PRDM15P57071 1507 aaPredicted RBP14.24□□□□□ -0.13
CNIH4-202ENST00000366857 ATP10AO60312 1499 aa14.23□□□□□ -0.13
CNIH4-202ENST00000366857 CCDC141Q6ZP82 1450 aa14.22□□□□□ -0.13
CNIH4-202ENST00000366857 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
CNIH4-202ENST00000366857 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
CNIH4-202ENST00000366857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.21□□□□□ -0.13
CNIH4-202ENST00000366857 ZMYM4Q5VZL5 1548 aa14.21□□□□□ -0.13
CNIH4-202ENST00000366857 REREQ9P2R6 1566 aa14.21□□□□□ -0.14
CNIH4-202ENST00000366857 LAMC1P11047 1609 aa14.2□□□□□ -0.14
CNIH4-202ENST00000366857 ZNF644Q9H582 1327 aaPredicted RBP14.19□□□□□ -0.14
CNIH4-202ENST00000366857 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
CNIH4-202ENST00000366857 SPHKAPQ2M3C7 1700 aa14.18□□□□□ -0.14
CNIH4-202ENST00000366857 TET3O43151 1660 aa14.18□□□□□ -0.14
CNIH4-202ENST00000366857 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
CNIH4-202ENST00000366857 DUOX2Q9NRD8 1548 aa14.18□□□□□ -0.14
CNIH4-202ENST00000366857 PIK3C2BO00750 1634 aa14.17□□□□□ -0.14
CNIH4-202ENST00000366857 PLEKHH2Q8IVE3 1493 aa14.17□□□□□ -0.14
CNIH4-202ENST00000366857 ASXL2Q76L83 1435 aa14.17□□□□□ -0.14
CNIH4-202ENST00000366857 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
CNIH4-202ENST00000366857 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
CNIH4-202ENST00000366857 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.15
CNIH4-202ENST00000366857 PLA2R1Q13018 1463 aa14.14□□□□□ -0.15
CNIH4-202ENST00000366857 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
CNIH4-202ENST00000366857 TRPM1Q7Z4N2 1603 aa14.14□□□□□ -0.15
CNIH4-202ENST00000366857 FAM135AQ9P2D6 1515 aa14.14□□□□□ -0.15
CNIH4-202ENST00000366857 ANKRD30BQ9BXX2 1392 aa14.13□□□□□ -0.15
CNIH4-202ENST00000366857 ATP7AQ04656 1500 aa14.13□□□□□ -0.15
CNIH4-202ENST00000366857 ZC3H13Q5T200 1668 aaKnown RBP14.13□□□□□ -0.15
CNIH4-202ENST00000366857 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
CNIH4-202ENST00000366857 HECW2Q9P2P5 1572 aa14.13□□□□□ -0.15
CNIH4-202ENST00000366857 DIP2CQ9Y2E4 1556 aa14.12□□□□□ -0.15
CNIH4-202ENST00000366857 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
CNIH4-202ENST00000366857 APLP2Q06481 763 aa14.11□□□□□ -0.15
CNIH4-202ENST00000366857 TRAPPC8Q9Y2L5 1435 aa14.11□□□□□ -0.15
CNIH4-202ENST00000366857 MROH2AA6NES4 1674 aa14.1□□□□□ -0.15
CNIH4-202ENST00000366857 KIAA1210Q9ULL0 1709 aa14.09□□□□□ -0.15
CNIH4-202ENST00000366857 MLH3Q9UHC1 1453 aa14.08□□□□□ -0.16
CNIH4-202ENST00000366857 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
CNIH4-202ENST00000366857 TTBK1Q5TCY1 1321 aaPredicted RBP14.07□□□□□ -0.16
CNIH4-202ENST00000366857 NEO1Q92859 1461 aa14.07□□□□□ -0.16
CNIH4-202ENST00000366857 UHRF1BP1Q6BDS2 1440 aa14.06□□□□□ -0.16
CNIH4-202ENST00000366857 TRPM2O94759 1503 aa14.06□□□□□ -0.16
CNIH4-202ENST00000366857 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
CNIH4-202ENST00000366857 IQGAP1P46940 1657 aa14.05□□□□□ -0.16
CNIH4-202ENST00000366857 FBLN2P98095 1184 aa14.05□□□□□ -0.16
CNIH4-202ENST00000366857 CLTCL1P53675 1640 aa14.05□□□□□ -0.16
CNIH4-202ENST00000366857 FANCAO15360 1455 aa14.05□□□□□ -0.16
CNIH4-202ENST00000366857 PTPRTO14522 1441 aa14.04□□□□□ -0.16
CNIH4-202ENST00000366857 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
CNIH4-202ENST00000366857 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
CNIH4-202ENST00000366857 PPLO60437 1756 aa14.03□□□□□ -0.16
CNIH4-202ENST00000366857 EFCAB6Q5THR3 1501 aa14.03□□□□□ -0.16
CNIH4-202ENST00000366857 MADDQ8WXG6 1647 aa14.03□□□□□ -0.16
CNIH4-202ENST00000366857 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms