RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 OS9Q13438 667 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-202ENST00000366197 NUP155O75694 1391 aa13.31□□□□□ -0.28
ZNF548-202ENST00000366197 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-202ENST00000366197 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
ZNF548-202ENST00000366197 FOXD1Q16676 465 aa13.3□□□□□ -0.28
ZNF548-202ENST00000366197 KIF3BO15066 747 aa13.29□□□□□ -0.28
ZNF548-202ENST00000366197 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
ZNF548-202ENST00000366197 ZRSR1Q15695 479 aaKnown RBP13.29□□□□□ -0.28
ZNF548-202ENST00000366197 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
ZNF548-202ENST00000366197 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
ZNF548-202ENST00000366197 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
ZNF548-202ENST00000366197 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
ZNF548-202ENST00000366197 WIZO95785 1651 aa13.28□□□□□ -0.28
ZNF548-202ENST00000366197 RSPH4AQ5TD94 716 aa13.27□□□□□ -0.28
ZNF548-202ENST00000366197 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
ZNF548-202ENST00000366197 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
ZNF548-202ENST00000366197 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
ZNF548-202ENST00000366197 FGD1P98174 961 aa13.25□□□□□ -0.29
ZNF548-202ENST00000366197 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
ZNF548-202ENST00000366197 KCNJ4P48050 445 aa13.24□□□□□ -0.29
ZNF548-202ENST00000366197 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-202ENST00000366197 TRIM44Q96DX7 344 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-202ENST00000366197 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
ZNF548-202ENST00000366197 CCER2I3L3R5 266 aa13.23□□□□□ -0.29
ZNF548-202ENST00000366197 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
ZNF548-202ENST00000366197 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
ZNF548-202ENST00000366197 KTN1Q86UP2 1357 aaKnown RBP13.22□□□□□ -0.29
ZNF548-202ENST00000366197 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-202ENST00000366197 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
ZNF548-202ENST00000366197 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
ZNF548-202ENST00000366197 ROCK2O75116 1388 aaKnown RBP13.21□□□□□ -0.29
ZNF548-202ENST00000366197 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.29
ZNF548-202ENST00000366197 PTPRGP23470 1445 aa13.21□□□□□ -0.3
ZNF548-202ENST00000366197 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
ZNF548-202ENST00000366197 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
ZNF548-202ENST00000366197 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
ZNF548-202ENST00000366197 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
ZNF548-202ENST00000366197 IPO8O15397 1037 aaKnown RBP13.19□□□□□ -0.3
ZNF548-202ENST00000366197 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
ZNF548-202ENST00000366197 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
ZNF548-202ENST00000366197 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
ZNF548-202ENST00000366197 RALBP1Q15311 655 aa13.17□□□□□ -0.3
ZNF548-202ENST00000366197 TERF2IPQ9NYB0 399 aa13.17□□□□□ -0.3
ZNF548-202ENST00000366197 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
ZNF548-202ENST00000366197 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
ZNF548-202ENST00000366197 PTMAP06454 111 aaKnown RBP13.17□□□□□ -0.3
ZNF548-202ENST00000366197 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
ZNF548-202ENST00000366197 L3MBTL2Q969R5 705 aa13.16□□□□□ -0.3
ZNF548-202ENST00000366197 NAP1L2Q9ULW6 460 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-202ENST00000366197 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
ZNF548-202ENST00000366197 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.3
ZNF548-202ENST00000366197 EIF3AQ14152 1382 aaKnown RBP13.15□□□□□ -0.3
ZNF548-202ENST00000366197 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.314e-10■■■■■ 60.8
ZNF548-202ENST00000366197 NGDNQ8NEJ9 315 aaKnown RBP13.14□□□□□ -0.31
ZNF548-202ENST00000366197 NESP48681 1621 aa13.13□□□□□ -0.31
ZNF548-202ENST00000366197 GLIPR1L2Q4G1C9 344 aa13.13□□□□□ -0.31
ZNF548-202ENST00000366197 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-202ENST00000366197 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
ZNF548-202ENST00000366197 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-202ENST00000366197 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-202ENST00000366197 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
ZNF548-202ENST00000366197 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
ZNF548-202ENST00000366197 MCCP23508 829 aa13.11□□□□□ -0.31
ZNF548-202ENST00000366197 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
ZNF548-202ENST00000366197 GOLGA6L4A6NEF3 574 aa13.1□□□□□ -0.31
ZNF548-202ENST00000366197 APBB1O00213 710 aa13.1□□□□□ -0.31
ZNF548-202ENST00000366197 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
ZNF548-202ENST00000366197 RCAN3Q9UKA8 241 aa13.09□□□□□ -0.31
ZNF548-202ENST00000366197 HSCBQ8IWL3 235 aa13.09□□□□□ -0.31
ZNF548-202ENST00000366197 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
ZNF548-202ENST00000366197 NLRP13Q86W25 1043 aa13.08□□□□□ -0.32
ZNF548-202ENST00000366197 CCDC9Q9Y3X0 531 aaKnown RBP13.08□□□□□ -0.32
ZNF548-202ENST00000366197 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
ZNF548-202ENST00000366197 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
ZNF548-202ENST00000366197 AMPHP49418 695 aa13.07□□□□□ -0.32
ZNF548-202ENST00000366197 DNTTIP2Q5QJE6 756 aaKnown RBP13.07□□□□□ -0.32
ZNF548-202ENST00000366197 KIAA1211Q6ZU35 1233 aa13.07□□□□□ -0.32
ZNF548-202ENST00000366197 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
ZNF548-202ENST00000366197 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
ZNF548-202ENST00000366197 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
ZNF548-202ENST00000366197 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
ZNF548-202ENST00000366197 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-202ENST00000366197 NOP58Q9Y2X3 529 aaKnown RBP13.05□□□□□ -0.32
ZNF548-202ENST00000366197 ISY1Q9ULR0 285 aaKnown RBP13.03□□□□□ -0.32
ZNF548-202ENST00000366197 NRDCO43847 1150 aa13.03□□□□□ -0.32
ZNF548-202ENST00000366197 LMOD3Q0VAK6 560 aa13.03□□□□□ -0.32
ZNF548-202ENST00000366197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.03□□□□□ -0.32
ZNF548-202ENST00000366197 ERICH6BQ5W0A0 696 aa13.03□□□□□ -0.32
ZNF548-202ENST00000366197 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
ZNF548-202ENST00000366197 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
ZNF548-202ENST00000366197 ST20-MTHFSA0A0A6YYL1 179 aa13.03□□□□□ -0.32
ZNF548-202ENST00000366197 LTV1Q96GA3 475 aaPredicted RBP13.02□□□□□ -0.32
ZNF548-202ENST00000366197 GOLGA6L6A8MZA4 724 aa13.01□□□□□ -0.33
ZNF548-202ENST00000366197 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
ZNF548-202ENST00000366197 HMMRO75330 724 aa13□□□□□ -0.33
ZNF548-202ENST00000366197 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
ZNF548-202ENST00000366197 PDE3BQ13370 1112 aa13□□□□□ -0.33
ZNF548-202ENST00000366197 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
ZNF548-202ENST00000366197 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
ZNF548-202ENST00000366197 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms