RNA–Protein interactions for RNA: ENST00000361672.6

MSL3-203, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-203ENST00000361672 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
MSL3-203ENST00000361672 FER1L4A9Z1Z3 1794 aa14.05□□□□□ -0.16
MSL3-203ENST00000361672 ZFYVE16Q7Z3T8 1539 aa14.04□□□□□ -0.16
MSL3-203ENST00000361672 LRRIQ1Q96JM4 1722 aa14.04□□□□□ -0.16
MSL3-203ENST00000361672 REREQ9P2R6 1566 aa14.04□□□□□ -0.16
MSL3-203ENST00000361672 TROQ12816 1431 aaPredicted RBP14.04□□□□□ -0.16
MSL3-203ENST00000361672 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
MSL3-203ENST00000361672 PTPRTO14522 1441 aa14.03□□□□□ -0.16
MSL3-203ENST00000361672 CASKIN1Q8WXD9 1431 aa14.03□□□□□ -0.16
MSL3-203ENST00000361672 STRCQ7RTU9 1775 aa14.02□□□□□ -0.16
MSL3-203ENST00000361672 CLIP1P30622 1438 aa14.02□□□□□ -0.17
MSL3-203ENST00000361672 CDK11AQ9UQ88 783 aaPredicted RBP14.02□□□□□ -0.17
MSL3-203ENST00000361672 KDM5CP41229 1560 aa14.01□□□□□ -0.17
MSL3-203ENST00000361672 YEATS2Q9ULM3 1422 aa14.01□□□□□ -0.17
MSL3-203ENST00000361672 PREX2Q70Z35 1606 aa14□□□□□ -0.17
MSL3-203ENST00000361672 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
MSL3-203ENST00000361672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
MSL3-203ENST00000361672 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
MSL3-203ENST00000361672 ARHGEF12Q9NZN5 1544 aa13.97□□□□□ -0.17
MSL3-203ENST00000361672 ZNF518AQ6AHZ1 1483 aa13.97□□□□□ -0.17
MSL3-203ENST00000361672 CDC42BPBQ9Y5S2 1711 aa13.96□□□□□ -0.17
MSL3-203ENST00000361672 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.17
MSL3-203ENST00000361672 ITSN2Q9NZM3 1697 aa13.96□□□□□ -0.17
MSL3-203ENST00000361672 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.18
MSL3-203ENST00000361672 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
MSL3-203ENST00000361672 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
MSL3-203ENST00000361672 SETD1BQ9UPS6 1966 aaKnown RBP13.95□□□□□ -0.18
MSL3-203ENST00000361672 ATP10AO60312 1499 aa13.95□□□□□ -0.18
MSL3-203ENST00000361672 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
MSL3-203ENST00000361672 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
MSL3-203ENST00000361672 ABCC1P33527 1531 aa13.94□□□□□ -0.18
MSL3-203ENST00000361672 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
MSL3-203ENST00000361672 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
MSL3-203ENST00000361672 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
MSL3-203ENST00000361672 AGLP35573 1532 aa13.93□□□□□ -0.18
MSL3-203ENST00000361672 CDC42BPAQ5VT25 1732 aa13.92□□□□□ -0.18
MSL3-203ENST00000361672 ARHGAP5Q13017 1502 aa13.92□□□□□ -0.18
MSL3-203ENST00000361672 HSPA2P54652 639 aa13.92□□□□□ -0.18
MSL3-203ENST00000361672 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.18
MSL3-203ENST00000361672 DIP2CQ9Y2E4 1556 aa13.9□□□□□ -0.18
MSL3-203ENST00000361672 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
MSL3-203ENST00000361672 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
MSL3-203ENST00000361672 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
MSL3-203ENST00000361672 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
MSL3-203ENST00000361672 MROH2AA6NES4 1674 aa13.84□□□□□ -0.19
MSL3-203ENST00000361672 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
MSL3-203ENST00000361672 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
MSL3-203ENST00000361672 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
MSL3-203ENST00000361672 SAMD9LQ8IVG5 1584 aa13.82□□□□□ -0.2
MSL3-203ENST00000361672 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
MSL3-203ENST00000361672 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
MSL3-203ENST00000361672 CNTLNQ9NXG0 1405 aa13.8□□□□□ -0.2
MSL3-203ENST00000361672 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
MSL3-203ENST00000361672 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
MSL3-203ENST00000361672 PLXNC1O60486 1568 aa13.79□□□□□ -0.2
MSL3-203ENST00000361672 NCOA1Q15788 1441 aa13.79□□□□□ -0.2
MSL3-203ENST00000361672 ADGBQ8N7X0 1667 aa13.78□□□□□ -0.2
MSL3-203ENST00000361672 C3P01024 1663 aa13.78□□□□□ -0.2
MSL3-203ENST00000361672 CEP162Q5TB80 1403 aa13.77□□□□□ -0.21
MSL3-203ENST00000361672 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.21
MSL3-203ENST00000361672 TIAM1Q13009 1591 aa13.76□□□□□ -0.21
MSL3-203ENST00000361672 ATP1B4Q9UN42 357 aaPredicted RBP13.75□□□□□ -0.21
MSL3-203ENST00000361672 ATP7AQ04656 1500 aa13.75□□□□□ -0.21
MSL3-203ENST00000361672 SYCP2Q9BX26 1530 aa13.75□□□□□ -0.21
MSL3-203ENST00000361672 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
MSL3-203ENST00000361672 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
MSL3-203ENST00000361672 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
MSL3-203ENST00000361672 NPATQ14207 1427 aa13.73□□□□□ -0.21
MSL3-203ENST00000361672 SUPT6HQ7KZ85 1726 aaKnown RBP13.73□□□□□ -0.21
MSL3-203ENST00000361672 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.21
MSL3-203ENST00000361672 PLA2R1Q13018 1463 aa13.71□□□□□ -0.21
MSL3-203ENST00000361672 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
MSL3-203ENST00000361672 PPP6R1Q9UPN7 881 aa13.7□□□□□ -0.22
MSL3-203ENST00000361672 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
MSL3-203ENST00000361672 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
MSL3-203ENST00000361672 A2MP01023 1474 aa13.68□□□□□ -0.22
MSL3-203ENST00000361672 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
MSL3-203ENST00000361672 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
MSL3-203ENST00000361672 RSPH4AQ5TD94 716 aa13.66□□□□□ -0.22
MSL3-203ENST00000361672 SPAG9O60271 1321 aaKnown RBP13.65□□□□□ -0.22
MSL3-203ENST00000361672 CPS1P31327 1500 aa13.65□□□□□ -0.22
MSL3-203ENST00000361672 CAMSAP1Q5T5Y3 1602 aa13.65□□□□□ -0.22
MSL3-203ENST00000361672 CFDP1Q9UEE9 299 aaPredicted RBP13.64□□□□□ -0.23
MSL3-203ENST00000361672 VPS8Q8N3P4 1428 aa13.64□□□□□ -0.23
MSL3-203ENST00000361672 CCDC141Q6ZP82 1450 aa13.64□□□□□ -0.23
MSL3-203ENST00000361672 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
MSL3-203ENST00000361672 NCOA2Q15596 1464 aa13.63□□□□□ -0.23
MSL3-203ENST00000361672 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
MSL3-203ENST00000361672 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
MSL3-203ENST00000361672 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
MSL3-203ENST00000361672 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
MSL3-203ENST00000361672 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
MSL3-203ENST00000361672 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
MSL3-203ENST00000361672 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
MSL3-203ENST00000361672 PKD2Q13563 968 aa13.61□□□□□ -0.23
MSL3-203ENST00000361672 MLECQ14165 292 aa13.61□□□□□ -0.23
MSL3-203ENST00000361672 RNF17Q9BXT8 1623 aaKnown RBP13.6□□□□□ -0.23
MSL3-203ENST00000361672 LRRC9Q6ZRR7 1453 aa13.6□□□□□ -0.23
MSL3-203ENST00000361672 DHX29Q7Z478 1369 aaKnown RBP13.59□□□□□ -0.23
MSL3-203ENST00000361672 MIA2Q96PC5 1412 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms