RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TULP1O00294 542 aaPredicted RBP13.31□□□□□ -0.28
SIN3A-201ENST00000360439 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
SIN3A-201ENST00000360439 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
SIN3A-201ENST00000360439 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
SIN3A-201ENST00000360439 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
SIN3A-201ENST00000360439 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
SIN3A-201ENST00000360439 HNRNPMP52272 730 aaKnown RBP eCLIP13.3□□□□□ -0.28
SIN3A-201ENST00000360439 HSP90AA2PQ14568 343 aaPredicted RBP13.29□□□□□ -0.28
SIN3A-201ENST00000360439 PRXQ9BXM0 1461 aa13.28□□□□□ -0.28
SIN3A-201ENST00000360439 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
SIN3A-201ENST00000360439 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
SIN3A-201ENST00000360439 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
SIN3A-201ENST00000360439 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
SIN3A-201ENST00000360439 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
SIN3A-201ENST00000360439 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
SIN3A-201ENST00000360439 TNNT2P45379 298 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-201ENST00000360439 ARXQ96QS3 562 aa13.24□□□□□ -0.29
SIN3A-201ENST00000360439 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
SIN3A-201ENST00000360439 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
SIN3A-201ENST00000360439 KIF3BO15066 747 aa13.23□□□□□ -0.29
SIN3A-201ENST00000360439 KANK1Q14678 1352 aa13.22□□□□□ -0.29
SIN3A-201ENST00000360439 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
SIN3A-201ENST00000360439 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
SIN3A-201ENST00000360439 TAF7LQ5H9L4 462 aa13.21□□□□□ -0.29
SIN3A-201ENST00000360439 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
SIN3A-201ENST00000360439 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
SIN3A-201ENST00000360439 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
SIN3A-201ENST00000360439 USP35Q9P2H5 1018 aa13.19□□□□□ -0.3
SIN3A-201ENST00000360439 MAP3K1Q13233 1512 aa13.19□□□□□ -0.3
SIN3A-201ENST00000360439 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
SIN3A-201ENST00000360439 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
SIN3A-201ENST00000360439 NCLP19338 710 aaKnown RBP13.17□□□□□ -0.3
SIN3A-201ENST00000360439 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
SIN3A-201ENST00000360439 EIF4G2P78344 907 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIN3A-201ENST00000360439 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
SIN3A-201ENST00000360439 LRRC9Q6ZRR7 1453 aa13.15□□□□□ -0.3
SIN3A-201ENST00000360439 NOP58Q9Y2X3 529 aaKnown RBP13.15□□□□□ -0.3
SIN3A-201ENST00000360439 RSPH4AQ5TD94 716 aa13.14□□□□□ -0.31
SIN3A-201ENST00000360439 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
SIN3A-201ENST00000360439 TIAM1Q13009 1591 aa13.13□□□□□ -0.31
SIN3A-201ENST00000360439 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
SIN3A-201ENST00000360439 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
SIN3A-201ENST00000360439 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
SIN3A-201ENST00000360439 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
SIN3A-201ENST00000360439 SIN3AQ96ST3 1273 aa13.12□□□□□ -0.31
SIN3A-201ENST00000360439 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
SIN3A-201ENST00000360439 FYCO1Q9BQS8 1478 aa13.11□□□□□ -0.31
SIN3A-201ENST00000360439 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
SIN3A-201ENST00000360439 ARID3AQ99856 593 aa13.1□□□□□ -0.31
SIN3A-201ENST00000360439 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
SIN3A-201ENST00000360439 FGD1P98174 961 aa13.09□□□□□ -0.31
SIN3A-201ENST00000360439 PKD2Q13563 968 aa13.09□□□□□ -0.31
SIN3A-201ENST00000360439 POGKQ9P215 609 aa13.09□□□□□ -0.31
SIN3A-201ENST00000360439 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
SIN3A-201ENST00000360439 HOMEZQ8IX15 550 aa13.08□□□□□ -0.31
SIN3A-201ENST00000360439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.329e-8■■■□□ 15.5
SIN3A-201ENST00000360439 NUP155O75694 1391 aa13.08□□□□□ -0.32
SIN3A-201ENST00000360439 FOXD1Q16676 465 aa13.08□□□□□ -0.32
SIN3A-201ENST00000360439 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
SIN3A-201ENST00000360439 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
SIN3A-201ENST00000360439 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
SIN3A-201ENST00000360439 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
SIN3A-201ENST00000360439 GRIN2AQ12879 1464 aa13.07□□□□□ -0.32
SIN3A-201ENST00000360439 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
SIN3A-201ENST00000360439 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
SIN3A-201ENST00000360439 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
SIN3A-201ENST00000360439 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
SIN3A-201ENST00000360439 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
SIN3A-201ENST00000360439 APPP05067 770 aa13.04□□□□□ -0.32
SIN3A-201ENST00000360439 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
SIN3A-201ENST00000360439 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
SIN3A-201ENST00000360439 A0A0G2JS52 829 aa13.03□□□□□ -0.32
SIN3A-201ENST00000360439 NUTM2DQ5VT03 806 aaPredicted RBP13.03□□□□□ -0.32
SIN3A-201ENST00000360439 PPP4R2Q9NY27 417 aa13.03□□□□□ -0.32
SIN3A-201ENST00000360439 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
SIN3A-201ENST00000360439 STK26Q9P289 416 aa13.01□□□□□ -0.33
SIN3A-201ENST00000360439 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
SIN3A-201ENST00000360439 EID1Q9Y6B2 187 aa13.01□□□□□ -0.33
SIN3A-201ENST00000360439 PHLDB1Q86UU1 1377 aa13.01□□□□□ -0.33
SIN3A-201ENST00000360439 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
SIN3A-201ENST00000360439 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
SIN3A-201ENST00000360439 RAPGEF3O95398 923 aa13□□□□□ -0.33
SIN3A-201ENST00000360439 FAM9BQ8IZU0 186 aa13□□□□□ -0.33
SIN3A-201ENST00000360439 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
SIN3A-201ENST00000360439 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
SIN3A-201ENST00000360439 CUL7Q14999 1698 aa12.98□□□□□ -0.33
SIN3A-201ENST00000360439 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
SIN3A-201ENST00000360439 CHMP4BQ9H444 224 aaKnown RBP12.97□□□□□ -0.33
SIN3A-201ENST00000360439 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
SIN3A-201ENST00000360439 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
SIN3A-201ENST00000360439 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.34
SIN3A-201ENST00000360439 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
SIN3A-201ENST00000360439 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
SIN3A-201ENST00000360439 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
SIN3A-201ENST00000360439 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
SIN3A-201ENST00000360439 ARHGAP5Q13017 1502 aa12.94□□□□□ -0.34
SIN3A-201ENST00000360439 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
SIN3A-201ENST00000360439 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
SIN3A-201ENST00000360439 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
SIN3A-201ENST00000360439 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms