RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
CD46-206ENST00000360212 FGD1P98174 961 aa11.37□□□□□ -0.59
CD46-206ENST00000360212 RNF123Q5XPI4 1314 aa11.36□□□□□ -0.59
CD46-206ENST00000360212 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
CD46-206ENST00000360212 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
CD46-206ENST00000360212 AAMPQ13685 434 aa11.35□□□□□ -0.59
CD46-206ENST00000360212 TIAM1Q13009 1591 aa11.35□□□□□ -0.59
CD46-206ENST00000360212 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
CD46-206ENST00000360212 ARID3CA6NKF2 412 aa11.34□□□□□ -0.59
CD46-206ENST00000360212 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
CD46-206ENST00000360212 GZF1Q9H116 711 aaPredicted RBP11.34□□□□□ -0.59
CD46-206ENST00000360212 C20orf194Q5TEA3 1177 aa11.32□□□□□ -0.6
CD46-206ENST00000360212 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
CD46-206ENST00000360212 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
CD46-206ENST00000360212 PEG3Q9GZU2 1588 aa11.32□□□□□ -0.6
CD46-206ENST00000360212 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
CD46-206ENST00000360212 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
CD46-206ENST00000360212 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
CD46-206ENST00000360212 MS4A1P11836 297 aa11.31□□□□□ -0.6
CD46-206ENST00000360212 ERICH3Q5RHP9 1530 aa11.31□□□□□ -0.6
CD46-206ENST00000360212 NCOA1Q15788 1441 aa11.3□□□□□ -0.6
CD46-206ENST00000360212 FHOD3Q2V2M9 1422 aa11.29□□□□□ -0.6
CD46-206ENST00000360212 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
CD46-206ENST00000360212 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
CD46-206ENST00000360212 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
CD46-206ENST00000360212 BCL11BQ9C0K0 894 aaPredicted RBP11.29□□□□□ -0.6
CD46-206ENST00000360212 MPHOSPH9Q99550 1183 aa11.28□□□□□ -0.6
CD46-206ENST00000360212 PANK2Q9BZ23 570 aa11.28□□□□□ -0.6
CD46-206ENST00000360212 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
CD46-206ENST00000360212 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
CD46-206ENST00000360212 AEBP2Q6ZN18 517 aaPredicted RBP11.27□□□□□ -0.61
CD46-206ENST00000360212 MTUS2Q5JR59 1369 aa11.27□□□□□ -0.61
CD46-206ENST00000360212 RRP9O43818 475 aaKnown RBP11.26□□□□□ -0.61
CD46-206ENST00000360212 ARID3AQ99856 593 aa11.25□□□□□ -0.61
CD46-206ENST00000360212 NAIPQ13075 1403 aa11.25□□□□□ -0.61
CD46-206ENST00000360212 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
CD46-206ENST00000360212 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
CD46-206ENST00000360212 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
CD46-206ENST00000360212 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
CD46-206ENST00000360212 MAP3K1Q13233 1512 aa11.22□□□□□ -0.61
CD46-206ENST00000360212 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
CD46-206ENST00000360212 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
CD46-206ENST00000360212 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
CD46-206ENST00000360212 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.62
CD46-206ENST00000360212 KDM2AQ9Y2K7 1162 aa11.21□□□□□ -0.62
CD46-206ENST00000360212 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
CD46-206ENST00000360212 SLC4A1APQ9BWU0 796 aaKnown RBP11.2□□□□□ -0.62
CD46-206ENST00000360212 IGF1RP08069 1367 aa11.2□□□□□ -0.62
CD46-206ENST00000360212 SEC24BO95487 1268 aa11.2□□□□□ -0.62
CD46-206ENST00000360212 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
CD46-206ENST00000360212 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
CD46-206ENST00000360212 PTPN23Q9H3S7 1636 aa11.18□□□□□ -0.62
CD46-206ENST00000360212 CUX1P39880 1505 aa11.17□□□□□ -0.62
CD46-206ENST00000360212 GOLGA6L3A6NEY3 463 aa11.17□□□□□ -0.62
CD46-206ENST00000360212 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
CD46-206ENST00000360212 USP47Q96K76 1375 aa11.16□□□□□ -0.62
CD46-206ENST00000360212 DENND4BO75064 1496 aaPredicted RBP11.15□□□□□ -0.62
CD46-206ENST00000360212 ST20-MTHFSA0A0A6YYL1 179 aa11.14□□□□□ -0.63
CD46-206ENST00000360212 ATAD2BQ9ULI0 1458 aa11.14□□□□□ -0.63
CD46-206ENST00000360212 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
CD46-206ENST00000360212 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
CD46-206ENST00000360212 CENPQQ7L2Z9 268 aaPredicted RBP11.13□□□□□ -0.63
CD46-206ENST00000360212 MYBBP1AQ9BQG0 1328 aaKnown RBP11.13□□□□□ -0.63
CD46-206ENST00000360212 ERBB4Q15303 1308 aa11.12□□□□□ -0.63
CD46-206ENST00000360212 KDM2BQ8NHM5 1336 aa11.12□□□□□ -0.63
CD46-206ENST00000360212 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
CD46-206ENST00000360212 CFTRP13569 1480 aa11.11□□□□□ -0.63
CD46-206ENST00000360212 CLCN1P35523 988 aa11.11□□□□□ -0.63
CD46-206ENST00000360212 KDM6BO15054 1643 aa11.1□□□□□ -0.63
CD46-206ENST00000360212 PRDM4Q9UKN5 801 aa11.1□□□□□ -0.63
CD46-206ENST00000360212 BECN1Q14457 450 aa11.09□□□□□ -0.63
CD46-206ENST00000360212 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.63
CD46-206ENST00000360212 ZBTB7CA1YPR0 619 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 MYH16Q9H6N6 1097 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 ESPNB1AK53 854 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 IGHDP01880 384 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 NLRP13Q86W25 1043 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 TRIM44Q96DX7 344 aaPredicted RBP11.08□□□□□ -0.64
CD46-206ENST00000360212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.08□□□□□ -0.643e-6■■□□□ 12.8
CD46-206ENST00000360212 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 USP19O94966 1318 aa11.08□□□□□ -0.64
CD46-206ENST00000360212 BIVM-ERCC5R4GMW8 1640 aa11.07□□□□□ -0.64
CD46-206ENST00000360212 PDE3BQ13370 1112 aa11.07□□□□□ -0.64
CD46-206ENST00000360212 MYOM3Q5VTT5 1437 aa11.07□□□□□ -0.64
CD46-206ENST00000360212 ANKRD30BQ9BXX2 1392 aa11.07□□□□□ -0.64
CD46-206ENST00000360212 ZNF644Q9H582 1327 aaPredicted RBP11.06□□□□□ -0.64
CD46-206ENST00000360212 BCAR3O75815 825 aa11.06□□□□□ -0.64
CD46-206ENST00000360212 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
CD46-206ENST00000360212 RALBP1Q15311 655 aa11.06□□□□□ -0.64
CD46-206ENST00000360212 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
CD46-206ENST00000360212 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
CD46-206ENST00000360212 TRAK2O60296 914 aa11.05□□□□□ -0.64
CD46-206ENST00000360212 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
CD46-206ENST00000360212 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
CD46-206ENST00000360212 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
CD46-206ENST00000360212 TBC1D2Q9BYX2 928 aa11.05□□□□□ -0.64
CD46-206ENST00000360212 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
CD46-206ENST00000360212 MCM4P33991 863 aa11.04□□□□□ -0.64
CD46-206ENST00000360212 KIAA1211Q6ZU35 1233 aa11.04□□□□□ -0.64
CD46-206ENST00000360212 CASKIN1Q8WXD9 1431 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms